Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------GLK1(1)                                  ------>NtERF2             --------->MYB52(1)                                       --------->LBD16           <---------AHL20(2)                                        --------->ANAC46       <---------MYB52(1)                                         --------->ARR14(2)      --------->LBD16                                             <---------ARR14(2)      --------->At5g28300                                        <---------GLK1(1)      <---------RAP2.6(3)   --------->ANAC46                     <---------CCA1(2)     <---------ANAC46       --------->ANAC58                  <------ZmHOX2a(2)               ------>ZmHOX2a(1)     ----------->GT1        --------->ANAC58               <---------ETT(2)                  --------     <---------ANAC55(2)  ---------->DOF2                 <------NtERF2--------->ANAC46     <--------    <-----------------------TaNAC69(2)                  --------->DEAR3(1)           <----------DOF2 --------HVH21     --------->GLK1(1)          ------>ZmHOX2a(2)--------->YAB1     ------>NtERF2   gtcaatgccgtaaattatcggaattcccaaacgcgactctaacgctgatcgctggaagccgtcgatcatatccgcccaattcgacgactttgcatcctca  17341500              --------->LBD16             <---------ANAC46         ----------->RAV1(2)       ------->GAMYB      --------->MYB46(3)     ------>MYB46(1)                                         <----------DOF2     -------->P<---------DEAR3(1)                         ------->TEIL     ------>MYB83                                        <---------CCA1(2)    <---------ALFIN1                                 <----------DOF2                   <----------ID1 ->TOE2(3) ------>ZmHOX2a(1)                        <---------ANAC58            --------->YAB1 ---------AGL1<---------ZAT18 ----------->RAV1(2)   <---------ANAC58           <---------YAB1  ------   aatggccaacctcctgcgcggttcaatacactacctgtaacaatatgacaacttgctttgtatcttttagtatgttcaattttcataagagaacaaaaaa  17341600                                <---------WRKY18(1)                               --------->WRKY12                               --------->WRKY45                               --------->WRKY38(1)                         <------MYB46(1)                         <------MYB83                                <---------ARR14(2)                        <---------AtMYB61                            <---------ZAT14                        <---------MYB46(3)                        <---------ANAC46                        --------->MYB59                       <-------GAMYB                   -------                   <---------TOE2(3)                         <---------MYB46(3)               -------          --------->ARR11(3)  --------->DOF5.7(2)           <---------AtMYB61               <--------          <---------ARR11(3) <-------GAMYB                <-----------RAV1(1)     --------->GLK1(1) < ---->DOF2--------->GLK1(2) <---------MYB46(3)           <---------DEAR3(1)       <---------GLK1(1)<-   agaattagagaaaatctaacaaaggtttggtcgttgaccaaaacaaaatttagaaatggtctgtggttgtgtataccgatggagaaatctcttatcacgg  17341700                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.3(3)                                                                                    --------->RAP2.3(1)                                                                                    <------NtERF2                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                 ------->MYC2                                                                                 ------->MYC3                                                                                 <-------MYC2                                                                                 <-------MYC3                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                          <----------DOF2                                                                          ------>ZmHOX2a(1)                                                                      --------->ARR11(3)         --------->ANAC58                                             <---------ARR11(3)            <      ----------->HVH21                                              <---------HSFC1(2)    <--------- -->ANAC58                    ----------->RAV1(2)                    <---------HSFB2a(1) ----------->RAV1(2) -->ANAC58                    --------->At4g35610                    --------->HSFB2a(1)<---------ALFIN1 ---GT1  --------->ANAC58     <---------At4g35610                    --------->HSFC1(2)<---------ZAT14 -----------RAV1(2)    ---------->DOF2                      --------->LBD16     --------->ANAC58 <--- -----NtERF2         <------ZmHOX2a(2)                   <---------At4g35610 <---------REM1(2)  -----   cctcagaagcgacgctacgttcgatcaaagtcatctggccgattttttcagccagagtcatccgagagagaaggtcctttacacgcgcctccactggcgc  17341800      <---------ANAC58      <---------ANAC58                                                                              <    <---------ARR14(2)                                                                            ---    --------->ARR14(2)                                                                            ---   <---------MYB52(1)                                                                            ----  --------->LBD16                                                                                <--- --------->LBD16                                                                    <----------DOF2 < ---------LBD16                                  <----------DOF2          *TSS      ================= --RAV1(1)               <---------YAB1        ------>ZmHOX2a(1)       <-----------HVH21   <--------- -------DOF2   --------->TOE2(2)   <---------ATHB12        <<<<<<<<<TBF1 <-----------GT1   ========== ---->ATERF1(1)--------->TOE1(2) --------->WOX13(1)  XXXXXXXXXXXXXXXXXXXX>MIR838  ------>ZmHOX2a(1) -   ttcccggttcttgtaaacatatgacttctcattgtcaaccattttcttcctctttctcttcttcttcttacaatgtcacttctcctctttagtctttaat  17341900           --------->ZAT2           <---------ZAT2           --------->STY1(2)           <---------STY1(2)          --------->ANAC58 ---------AHL20(2)            ----------->HVH21 ------>AHL20(2)      <-------MYC3 -------->TBP         ------->MYC3  --------->WRKY12 ----->AHL20(1)      --------->TGA1a--------->WRKY45 ------AHL20(1)      --------->O2  --------->DOF5.7(2) -----------TBP      <---------O2<---------ANAC46                 <------ZmHOX2a(1) ==============================bZIP_DOF                          <----------ID1 -DOF2    --------->ANAC58  --------->ALFIN1                  <------ZmHOX2a(1) ==============================bZIP_DOF<---------ANAC46     <---------TOE1(3) -------->AHL20(2)   <---------TGA1a--------->WRKY38(1)     <---------TOE2(3)                      --   atatatatagccaagctagggacacatgggatgggacgttgacttggaaacacactcggattaaggaaggacaaaatatcaactagaattcatttcatat  17342000                                                                 <---------ANAC58                                                                 <---------ANAC46                                                       <---------AHL20(2)                                                      <---------AHL20(2)                                                      <---------AHL20(1)                                                      --------->AHL20(2)                --------->AHL20(2)                                                   <---------AHL20(2)                   <---------AHL20(2)                                                  <---------AHL20(2)                   --------->AHL20(2)                                                  <---------AHL20(1)           --------->TOE2(3)                                                  --------->AHL20(2)          ----------->GT1                                                  --------->AHL20(1) ----------->GT1   --------->YAB1          --------->ZAT14                        <---------AHL20(2) ----------->GT1    <---------AHL20(2)          <---------ZAT14                     --------->AHL20(2) <---------ANAC58   --------->YAB1       --------->ALFIN1           <----------ID1 --------->AHL20(2)--------->ALFIN1--------->ICU4 ----->TEIL               ----------->GT1   --------->TOE2(3)   <---------MYB46(3) <---------YAB1   -   gtatgtaaggtgtgaagtcttgagaacatggctaaaacaccaaaaacataaattaatttttttttttgggtgggaaaaaaacgttataattaaaatgttg  17342100                                                                                                  <--                                                                                              -------                                                --------->AHL20(2)                            <------                                               --------->AHL20(2)       <---------TOE2(3)   <--------         --------->AHL20(2)                  ------>MYB46(1)            <---------YAB1  <---------YAB1         <---------AHL20(2)             <-----------GT1--------->MYB52(1)               <---------AHL20(2)     ----------->GT1       <---------TOE2(3) ------>MYB83<----------ID1<-----------GT1<---------ICU4 ---------->GT1            --------->MYB59 <---------MYB59 ----------->GT1           --------->ICU4   tattgtaagattaaaatcaattggaattttaggtatgaattcttaccaaataaaaaataacgagaaaaatgtttaacattgtgcataaatattattacat  17342200                                                                                <---------AHL20(2)                                                                                --------->YAB1                                                                                --------->AHL20(2)                                                                        <---------YAB1                                                       --------->bZIP60(1)   --------->YAB1                                                       <---------bZIP60(1) <---------WOX13(1)                                                  <---------ANAC58  <---------YAB1                                                  <---------ANAC46 --------->AHL20(1)    ---------->DOF2                      <---------ANAC46          <---------AHL20(1) -------ARR11(3)                         <---------ANAC58          --------->ARR11(3) -->ANAC55(2)                            <---------ANAC58   <---------ANAC55(2)<---------------AGL15 ---ANAC55(2)            <---------TOE1(3)        <---------ANAC58<---------AHL20(2)<---------YAB1 ---GT1  <-----------GT1 <---------TOE2(3)       <---------MYB46(3)<---------ARR11(3)   gattttcaaagttactaaacacaaactaaggtagtctaggcatgcttgtattgggtgaagtcacataaatatttttgattaataatatgagtaaacatat  17342300                                                                                                  ---                                                                                                -----           <------MYB46(1)                                                                ---------->DOF2           <------MYB83                                                             --------->At4g35610          --------->MYB111(2)                                                       --------->ZAT14          --------->MYB46(2)                           <---------ANAC46             <---------At4g35610          --------->MYB111(1)                        --------->ZAT2                 --------->ZAT18          <---------MYB46(3)                        --------->ALFIN1                <---------ZAT14         <--------P                              --------->ALFIN1                   <------NtERF2----         <---------MYB55(1)                      <---------DEAR3(1)              <---------At4g35610        <-------GAMYB                    <---------ARR14(2)                      --------->At4g35610       <---------MYB46(3)--------->ARR11(3)     <------ZmHOX2a(1)              <---------RAP2.3(2)---       <------MYB83  ---------->DOF2     --------->ARR14(2)         ------->TEIL<---------RAP2.3(1)<-       <------MYB46(1)   <---------ARR11(3)------>ZmHOX2a(2)    <---------LBD16<---------RAP2.6(2)---   aaaaacatttggttggtatacttaaaagctcttcaaacatttggatcggaggaggtgctggggttctacggacgtttattagcggctgcacagaaagacc  17342400  Previous    Next  AGI:  At3g47050.1    Description:  glycosyl hydrolase family 3 protein. similar to hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G47010.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G47040.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G47000.1); similar to hypothetical protein OsI_019483 [Oryza sativa (indica cultivar-group)] (GB:EAY98250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21506.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains In Range:  from: 17339020    to: 17341874    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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