Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                =================RAV                                                            -------              ----------->RAV1(1)                                                             -------        --------->TOE1(3)                          --------->LBD16        --------->TOE1(3)   -------        --------->TOE2(3)                        <---------LBD16          --------->TOE2(3)  --------        --------->AtMYB61                       ------->GAMYB     ------>MYB46(1)            <-------      -------->P                    <---------HSFB2a(2)         <---------MYB46(2)      --------->YAB1      ------->TEIL                  --------->HSFB2a(2)         --------->DEAR3(1)     --------->At4g35610 --------->YAB1       <------ZmHOX2a(1)       --------->At4g35610 ------>MYB83      --------->At4g35610 ---------ATHB12   <-----------RAV1(2)   --------->YAB1     <------ZmHOX2a(2)     --------->YAB1 ----   aaatcatcaacctcaacaacatcaggagtcacaatcttctcgataatcaactgcgcgattcgatcaccgaacttaacctcaaaatcagcatcagaatgat  17299500                                                                                             <------NtERF2                                                                                            ------>NtERF2                                                                                        <---------DEAR3(1)                                                                                      ------>ZmHOX2a(2)                                                                                     <---------GLK1(1)                                                                                     --------->GLK1(1)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(3)                                                                                    --------->ARR11(3)                                                                                    --------->ARR14(2)                                                     ------>MYB46(1)                <---------ARR14(2)                      ------>ZmHOX2a(1)              ------>MYB83                   <---------AGP1                  --------->ARR14(2)           --------->At4g35610                  --------->AGP1              ------>MYB46(1)                 --------->ANAC58                      <---------ARR11(3) -->ATHB12    -------->P                --------->YAB1                   --------->ANAC58  --------->ANAC46 ---->GT1     ------>MYB83             <---------ATHB12          --------->HSFB2a(1)<---------ARR14(3) -->YAB1     ----------->RAV1(1)--------->At4g35610 ----------->RAV1(1)  --------->ANAC46 <------NtERF2 ->ICU4     --------->AtMYB61 --------->YAB1  --------->ANAC58  <---------TOE1(2)   <-----------ARR10 --YAB1  --------->ANAC46  --------->YAB1 --------->ANAC46--------->WOX13(1)       <---------CCA1(2) ----->AHL20(2)   <---------ARR14(2) --------->WOX13(1)--------->TOE2(3) --------->ANAC58 --------->RAP2.3(1)   taaacaaaatcacaccaacaggtcctctataatcagcatcaatcacaccagcaccaacatcaatcgaatgtttccaagccaaaccagatctcggcgcaat  17299600                                                                                     ================                                                                                   <---------ALFIN1                                                                                  --------->ZAT14                                                                                  <---------ZAT18                                                                                  <---------ZAT14                                                                                 --------->DEAR3(1)                                                                                --------->ANAC46  ---               <---------HSFB2a(2)                                           --------->MYB46(3)   <--               --------->HSFB2a(2)    <---------MYB52(1)                    <<<<<<<<<GATA-3      <---              <---------LBD16      <-------TEIL                             <<<<<<<<<GATA-2    ------             <---------LBD16       ------>ZmHOX2a(2)                        <<<<<<<<<GATA-4   <------ZmHOX2a(2)  <---------ANAC58                <------ZmHOX2a(2)                         <<<<<<<<<GATA-1  <-------  <---------ANAC46               --------->ARR14(2)  <-----------GT1       --------->ARR14(2)--------  <---------ANAC58               <---------ARR14(2)<---------DAG2    ==========================bZIP_DOF  --------->ANAC55(2)            --------->AGP1    <----------DOF2   <----------DOF2 --------->TGA1a  <---------ANAC55(2)          ----------->ARR10   ============================================bZIP_DOF   tctcgcgtaagttccttcgggaacagcgatacttagatccgttgggataagcgctttacctctcgctggaacttttgaatccaccgcacttgagagatcg  17299700                           <------MYB83                          <---------AtMYB61                         <--------P                       --------->ALFIN1                     --------->O2                     <---------ANAC46   --------->At4g35610<-------MYC3   <---------At4g35610------->MYC3   <---------LBD16  ------>NtERF2 <------------MYB.PH3(1) =================================MYC_MYB ------>ARR14(2)    --------->LBD16       <---------LBD16 -------ARR14(2)   --------->DEAR3(1)     <---------HSFB2a(2) ------CCA1(2)   --------->At4g35610  <----------DOF2 >ZmHOX2a(2)     <---------At4g35610--------->At4g35610                         <---------YAB1     <- --ARR11(3) <---------MYB46(3)  <-----------GT1            <----------DOF2<---------AtMYB61      <--- ->ARR11(3)--------->ALFIN1<------MYB46(1)--------->HSFB2a(2)        --------->YAB1------->TEIL  <---   tatccagcggagagtggtgagccgcgtgttggtataacagctttctcggagagtttcttcactttgaagaatggtgatggtgatgaatcgccatggattc  17299800                                           --------->ANAC58                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                    <---------ARR14(2)                                    --------->ARR14(2)                                   --------->DOF5.7(2)                                 --------->MYB52(2)           <----------DOF2      <-------TEIL      <---------ETT(2)        ----------------------->TaNAC69(2)     --------->WRKY18(1)     <---------MYB46(3)     XXXXXXXXXXXXXXXXXXXX>MIR832-5P --------MYB52(1)        ----------->HVH21 --------->ANAC58 ------ANAC58          --------->ANAC55(2) --------->ANAC46                           <---------MYB52(1) ------ANAC58         <---------TOE2(3)--------->ANAC58                          --------->GLK1(2)   cgtttcggtcgagcttttggagtttaggtgatggttcgtttacgcaagccattgttgaaattgggaatcgaagttttgttaagagtctgtttgtggagtt  17299900                                                                               <---------ANAC58                                                                   ------>NtERF2                                                                   --------->LBD16                <--                                                                  --------->ANAC58                >>>                                                                  --------->ANAC58                <--                                                                  --------->ANAC46 <---------ANAC58 -                                                                 <---------LBD16   --------->ALFIN1 <                                                               --------->ARR14(2)  <---------ANAC58--                                                          <---------ANAC46     <---------ANAC58 <----                                                      <---------HSFC1(2)       <---------ANAC46------       --------->TOE1(3)                              --------->HSFC1(2)--------->AHL20(2)XXXXXXXXXXX       --------->TOE2(3)             *TSS             <---------HSFB2a(1)<---------AHL20(2) ---------    --------->GLK1(1)<---------TOE2(3)      ----------->TGA1   <---------ARR14(2)--------->ALFIN1----   gcagagaaaccctaatttcaattgaggtcgaattgttgttgttgtgatgacgaagaagcgtcgtagttccgccattaaatggagtgtgtgtgagtgagtg  17300000       <-----------GT1 -------ANAC46 >>>>>>>E2Fa -------PCF2 ----------->CBF ------NtERF2 ---->NtERF2  <---------ALFIN1                                                                     -- -----ATERF1(1)                                                                                   <-- --->ALFIN1  --------->MYB46(3)                                                                ------ XXXXXXXXX>MIR171A                                                                             ------ >ATHB12   --------->ANAC46                       <----------DOF2                              <----- ----->RAP2.3(1)--------->ANAC46--------->HSFB2a(2)    <-----------GT1      ------>NtERF2     -------   gcgccaatatttccctccaccctaaaaaaaacttctaaaattctaagttgggctttttaactatttcatgtagttctcggcccattagacccaaaatttt  17300100         --------->AHL20(2) <---------HSFB2a(2) ------->YAB1 -------YAB1 --->AHL20(1)                  --------->ZAT14 --->AHL20(2)                  <---------ZAT14                                            <---------At4g35610 ----AHL20(2)          <---------AHL20(2)                    <----------DOF2  <---------ANAC58     <- -->AHL20(2)           --------->AHL20(2)              <---------YAB1         <---------ANAC58  <----   attatagaagaataaatatggacatttaaattcttcactgatacaatttggcattttttgattctttgggatttgtattgtcttgttttctctgctaatt  17300200                                             --------->GLK1(2)                      <-------TEIL          --------->ARR14(2)                  <---------ARR11(3)        <---------ARR14(2)                  <---------AHL20(1)        <---------GLK1(2)                  --------->ARR11(3)   --------->ANAC46                ------------>CBF          ---- --------YAB1     --------->AHL20(1)   --------->ANAC58   --------->AHL20(2)     <---------AHL20(2) -----AHL20(2) --------->AHL20(2)      --------->ANAC58   <---------AHL20(2)    --------->AHL20(2)   tatgattctaaattctaaaaaatattcatccattctaaaactcgcaaattctgagcatatttaaatgggcttagccaattcatttaatcggcccattagc  17300300                                               ------>ZmHOX2a(2)                              <------                                             --------->ARR11(3)                               <------                       --------->At4g35610   <---------ARR11(3)                               -------              ------------>CBF           <------------CBF                                     <------              ------>ZmHOX2a(1)         --------->ATHB12                                      <------       <---------ARR11(3)              <---------YAB1               <---------YAB1    --------->TOE2(3)       --------->ARR11(3)             <----------DOF2            <---------AHL20(2)   --------->TOE1(3) -------->CBF--------->TOE2(3)    <---------GLK1(2)   *TSS     ------->TEIL   ------>ZmHOX2a(1)   ccaattcaagttcttcctcaatagcagaagaaaatggaatctttattgatcttagggtttatatgaatttatgattcttcctcttaaaccctaatttcgt  17300400  Previous    Next  AGI:  At3g46940.1    Description:  deoxyuridine 5'-triphosphate nucleotidohydrolase family. similar to unnamed protein product [Vitis vinifera] (GB:CAO61170.1); contains InterPro domain DeoxyUTP pyrophosphatase subfamily 1; (InterPro:IPR008181); contains InterPro domain DeoxyUTP pyrophosphatase; (InterPro:IPR008180); contains InterPro domain dCTP Deaminase; (InterPro:IPR003232) Range:  from: 17299179    to: 17299937    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46950.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 17300354    to: 17301948    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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