Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                           <-----------GT1                                        <--                                      <---------YAB1                                              ---                                     --------->ARR11(3)         <---------bZIP60(1)               <--                                     <---------ARR11(3)         --------->bZIP60(1)      --------->YAB1                                    --------->YAB1           ----------->HVH21           -------->HAHB4 -------->HVH21                    <---------ATHB12    <---------YAB1              --------->YAB1 --- ---->O2                       <------ZmHOX2a(2)   <----------DOF2     ----------->GT1  --------->ICU4 ---ALFIN1                  <XXXXXXXXXXXXXXXXXXXXMIR864-5P<---------TOE2(3) --------->GLK1(1)   -----   ttgacgagacaagaagaacatttttagtttgggatcaatgatatttgaccattctttattaatgtgacattactggtgaaatctatgaaaatgatggtaa  17275900           <---------ARR14(3)           --------->GLK1(2)           --------->ARR11(3)           <---------ARR11(3)           <-----------ARR10           --------->ARR14(3)           --------->ARR14(2)     ------>NtERF2     --------->LBD16    --------->ANAC46 ----->ZmHOX2a(2) -----ZmHOX2a(2)                                      --------->DAG2 ------>ARR14(3)                                     ---------->DOF2 -------ARR14(3)                                <---------WOX13(1) ------>ARR11(3)                               >>>>>>>>>GATA-4                                      < -------ARR11(3)                               >>>>>>>>>GATA-1                                      < -------ARR14(2)                               >>>>>>>>>GATA-3                                 ------ ------>ARR14(2)                               >>>>>>>>>GATA-2                               -------- ---------ARR10                         <---------ZAT14                      ---------->ID1--------->ANAC58 ------>AGP1                           ----------->RAV1(1)             <---------YAB1      --------->ANAC58 ------>ARR10    <----------DOF2       <<<<<<<<<<<<<<<<<LFY      <---------YAB1  <----------DOF2  <--   gatcttccgccaaaatcttctttttgaaaaaactgttaagacaacagtggattgaaaaagctcaagtacaattgtgtttggctctttgtgatcaagaaag  17276000                                       ----------->GT1                                      <---------TOE2(2)                                      <---------TOE1(2)                                   <---------ANAC58                                   <---------ANAC58                                   <---------ANAC46                         <---------AHL20(2)                ----------->GT1             <-----------GT1       ------>ZmHOX2a(1) --------->AHL20(1)             --------->YAB1                --------->AHL20(2) ------MYB46(1)          <---------ARR11(3)         <---------MYB52(2)        ------>MYB46(1) ------MYB83             --------->ARR11(3)        <---------At4g35610        ------>MYB83 --->DAG2                --------->AHL20(2)        --------->At4g35610        --------->MYB52(1) -->DOF2                 <---------AHL20(1)  <------------CBF               <---------MYB59 ------P     <-----------GT1    <----------DOF2   ------->TEIL              --------->AtMYB61  ------   gttggaatcctatattttctctctgaatatatttctttcgtatgtaaaattgcatctaacatagtaaaatccaaaaaaccaaaccgaattaactaaatca  17276100                  --------->AHL20(2)         --------->ZAT18        <------NtERF2       <---------MYB46(3)      --------->ALFIN1      <---------ANAC46    <---------MYB46(3)                                         <---------REM1(1)                   <-   <---------AtMYB61 ---------->DOF2       <-----------GT1   <------------CBF                      --   --------->ALFIN1<---------AHL20(2)  <----------DOF2    --------->YAB1                       ------ --->YAB1<---------PCF2             ---------->ID1       <---------YAB1              ----------->TBP   aaatagtggtggggactaaatttaaaagcagtttttttgttcttttgacttctcacattatcatattgtagcattttctatttgtctatatatacactca  17276200              --------->YAB1 ------>ZmHOX2a(2) --------ARR11(3)                                       <-----------GT1              <---------TOE2(3) ------->ARR11(3)         <----------DOF2        ----------->GT1                   ---------->DOF2 -- --->YAB1   <-----------GT1                  --------->ATHB12                 <---------ANAC46    <--   tgatcttctacatttttcatcatcttctcttttcatttccttctaagtgattagttaataacacatttctcttagtaatggagggtaaaggaagagttgg  17276300                                                       --------->At4g35610                                                       ------>ZmHOX2a(1)                                                       <---------At4g35610                                                 ------>MYB46(1)                                              --------->HSFB2a(1)                                              <---------HSFC1(2)                                              --------->HSFC1(2)                                  <--                                              <---------HSFB2a(1)                         <---------HSFB2a(1)                                          <---------MYB52(2)                              --------->HSFC1(2)                      --------->At4g35610--------->ANAC58                                 <---------HSFC1(2)  <---------ICU4      <---------At4g35610--------->ANAC58                                 --------->HSFB2a(1) <---------YAB1       --------->ZAT2     --------->ANAC46 ------>NtERF2                  <---------TOE1(2) ------->YAB1         <---------ZAT2  <------NtERF2 ------>ZmHOX2a(1)               ------>ZmHOX2a(1) ----ZmHOX2a(2) <-----------HVH21  ---------->ID1------>MYB83                <-----------GT1 <-------TEIL   atcatcatcgtcttcttccttcacagctcaactctttggccccaaggaaccttcctcctctgccaacttcaactccattttccctccttccaaggttcga  17276400                                                                                 --------->ANAC46                                                                                 --------->LBD16                                                                                <---------LBD16                                    <---------GLK1(2)                  <---------ANAC46                                 <---------WOX13(1)                    <---------ANAC58             -                              <---------YAB1                           <---------ANAC58        ------                        <----------DOF2                              <-----------GT1       --------->ANAC58 <-----------GT1        <---------DAG2                   <----------DOF2       <---------LBD16 <----- -------ICU4        <---------MYB52(1)         <-------TEIL       <---------AHL20(2)       --------->ANAC58   ttatttctctatagtttcttctgttactttttatgatggattcttgaaattcattcttcctttctcatttttttcgtgttttcagggaacagcaagaaac  17276500           <---------ATHB12  --------->At4g35610    <---------At4g35610    <---------WRKY12    --------->At4g35610  <-----------HVH21 ------>ZmHOX2a(1)    --------->STY1(1) -------->TOE2(3)<---------PCF2                                                                 <---- --->HSFC1(2)    --------->TCP15(1)      --------->ICU4        ---------->ID1                   <---- ----HSFC1(2)--------->TOE2(2)    ---------->DOF2              ---------->ARF1            <----------DOF2   atcctaagctccaaacatgggtccctaggtcagtggaaaagtcttaattaagcctcagaaaacttgtctcccttcttgaatcaatatggttcctttcact  17276600                  --------->HSFB2a(2)                               --------->RAP2.6(3)        <-----------RAV1(2)                                        --------->ARR14(2)            <---     --------->ANAC58                 --------->At4g35610   --------->ANAC58                    <----     --------->ANAC58              <-------TEIL      <---------CCA1(2)                         <----- ------DOF2       <---------HSFB2a(2) <---------At4g35610   --------->ANAC58               <---------TOE2(3) -----DAG2     <-----------GT1 <---------YAB1 <-----------GT1      --------->MYB52(1)  <---------At4g35610   ttatattaagccaggttttactagaaaaacgttttgattcatctcaaaaaaccttctatctcatgccaagaacggctcaaaaattcttcatctaagattc  17276700                                  <------MYB46(1)                                  <------MYB83                                 --------->ALFIN1                <---------ANAC58             <---------ICU4      <---------AtMYB61               <---------ANAC46                   <    <----------DOF2           --------->LBD16                    <---------ANAC58                   - <---------MYB52(1)         <---------LBD16                  <<<<<<<<<MYB2                     ------ ------At5g28300      ----------------->AG                <---------TOE1(2)              ---------->DOF2 -------GT1 --------->ICU4--------->ARR14(2)       <---------ARR11(3)         --------->ANAC46 ------ --TEIL     <---------YAB1<---------ARR14(2)  <-------TEIL<---------TOE2(2)<---------REM1(2)  -------   accgttctttagtcaagattactatccaaatccgggtggtctaatggatacattatctccttggttttcgtggtttcttcacagaacaacgtaaagaagc  17276800  Previous    Next  AGI:  At3g46880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59080.1) Range:  from: 17276278    to: 17277251    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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