Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->YAB1                                                        <----                     <---------DEAR3(2)            --------->ZAT14                          <--------                 <---------TGA1a                   <---------ZAT14                       <---------ANAC58                 --------->TGA1a              ---------->DOF2                            <---------ANAC58                 ==================================bZIP_DOF                           <---------GLK1(1) ------DOF2      ==================================bZIP_DOF                  <---------MYB46(3) ----- >RAV1(2)    <---------MYB52(2)         ---------->DOF2                     <--------P--------->GLK1(1)   tttggtagaatagtcacaaacgtcggtatgacaatcgacttacaaagccaaagtactctgatcaaaactcaccatctggttgtttcagatttcttgtcac  17273600                                 <---------TOE2(3)                                 <---------TOE1(3)                              <---------MYB52(1)        --------->At4g35610                             <-------GAMYB              --------->ZAT2                          <---------At5g28300           <---------ZAT2                          <---------LBD16--------->ANAC46                         ------------>AtMYB77        --------->LBD16                      <----------DOF2    --------->ANAC58           <---------HSFB2a(2)--------->ARR14(2)   --------->HSFB2a(2)   <-----------HVH21 -----ANAC55(2)    <---------ARR11(3)    --------->ANAC58                <-----------TGA1 ---HVH21  --------->HSFB2a(2)<---------ARR14(2)   <---------HSFB2a(2)  --------->bZIP60(2)---------- ---->ANAC55(2)    --------->ARR11(3)<-----------HVH21  <---------At4g35610      <---------AHL20(2)   ttaagtctatgtactagaagaggtctttcacggttacggtttcaggccaaggtcccgaagctgacaaacttgcatcgtcacattttatatggtctgatgg  17273700                    --------->TOE2(3)                   --------->YAB1                   ----------->GT1                                                           --------                ------>ZmHOX2a(1)                                                        <---------YAB1           <---------GLK1(1)                                             <---------AHL20(2)<---------AHL20(2)      <---------ANAC46                                      <---------ARR11(3)        <---------YAB1      ----------->GT1                                       --------->ARR11(3)  <-------TEIL<-------- ->HVH21   --------->GLK1(1)      <------ZmHOX2a(1)        <---------CCA1(2)<---------YAB1--------->YAB1   agtccattctgtgaaatcctatcgttatatatgctaggaactaatgtgtcaaaatcagttcatatctctctataatttatgattcattttgattataatg  17273800                                                                               --------->MYB52(1)                                                                             --------->MYB46(3)                                                     <---------ZAT14         <---------MYB52(2)                                                     --------->ZAT14       <-----------GT1                             ---------->DOF2 --------->ARR11(3)   ----------->HVH21                --   <---------MYB52(1)   <---------ARR11(3)   <-----------ARR10  --------->ANAC58              ------- ->YAB1                 --------->ARR11(3)   <---------ARR11(3) --------->ANAC46            --------- -YAB1             <----------DOF2          <---------CCA1(2)   --------->ANAC58       ----------->RAV1(1)   ttctcgtttgctctccatctcctttagattttaaagaaatagcatcatatctcactaaactaaaaaacgcgacgttttaacaaacgaagcaccataaaac  17273900         <---------TOE1(2)  <---------ANAC58          <---------ANAC46                                                 --------  <---------ANAC46          <---------ANAC58 <---------ANAC58       *TSS---------->DOF2    <---------At4g35610  <---------ANAC58          <---------ANAC58 <---------ANAC58    <------NtERF2             --------->At4g35610 <-----------------------TaNAC69(2)      <------------CBF       ------>NtERF2              --------->CCA1(2) <------NtERF2           <---------MYB52(1)  <---------ANAC46  <---------DEAR3(1)   <----------DOF2 ------->ALFIN1  --------->ZAT6     <---------TOE2(3)       --------->DAG2      --------->ANAC58 -->MYB52(1)   <-----------GT1   <----------DOF2          ---------->DOF2       --------->ANAC58 ->DOF2  ------->TEIL   <-------GAMYB  <---------AHL20(2)<------ZmHOX2a(1)      --------->ANAC46   ggtgtcgtttgtacgtttaacactaccgttgtgtgttttatgttattgtgtgatacagaggaaaggcgacgattcaaagttcacgcctttgagagatgac  17274000                    --------->HSFC1(2)                    <---------HSFC1(2)                    --------->HSFB2a(1)                          <---------ARR14(2)                    <---------HSFB2a(1)                          --------->ARR14(2)                  ---------->DOF2                                --------->GLK1(2)               <---------HSFB2a(2)                              <---------GLK1(1)               --------->HSFB2a(2)                           --------->ANAC58           --------->ZAT2                                    --------->ANAC46           <---------At4g35610                               --------->ANAC58           --------->At4g35610                        <---------ICU4  <---------MYB52(1)         ----           <---------ZAT2                        --------->HSFB2a(2) <-----------HVH21     <---------HSFB2a(2) --->HVH21<---------DEAR3(2)  <----------DOF2    <---------HSFB2a(2) --------->LBD16       --------->HSFB2a(2)   agccattcgcgtctgctcgcgaaagttcccaactttcgcttcgattttcttccaaaacattacaaggaatccgtcaattcatcgaatttcattctcgaat  17274100                               --------->RAP2.6(2)                               --------->DEAR3(1)                             --------->At4g35610                             <---------At4g35610                         <---------ARR14(2)                         --------->ARR14(2)                    --------->ANAC58                    --------->ANAC46                                <---------ANAC46                -                    --------->ANAC58    --------->ZAT14            --------->RAP2.6(3)              -          --------->ANAC58   ------>NtERF2                       ----------->HVH21              -----          --------->ANAC58   --------->LBD16                  ----------------->AGL1     <---------LBD16          --------->ANAC46 <---------LBD16      <----------DOF2  ----------->TGA1     ------>ZmHOX2a(1) ----->AHL20(2)--------->REM1(1)        <---------ZAT14     --------->ARR14(2)        ===============   ttaaaacccaaaacgctacttcacccaattccgccgaaacccttcactgtctttgtttctcggttccatgacgggagaccaagaggtcctctctggagag  17274200                            <---------ANAC58                            <---------ANAC58          ------>ZmHOX2a(2) --------->ANAC55(2) -------->ANAC58        <----------DOF2                               --------->At4g35610 -------->ANAC58        <---------DAG2                                --------->ZAT2 ------>GT1   ---------->DOF2    --------->GLK1(2)           <----------ID1          --------->YAB1 ================HOX2a_HOX2a<---------ANAC46         ---------->DOF2 --------->GLK1(2)       <-------   gtaagaaactgatcggaaaagaagcccttttcgtgattctgggtctcaagagattgaaagaagacgacgagaagctggacaagtttataaaaacccatgt  17274300                                                                                        <---------O2                                                                                        --------->ANAC55(2)                                                                                        --------->ANAC46                                                                                        <---------ANAC55(1)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                         <----------DOF2                                <---------ANAC55(2)                                       --------->At4g35610                     <---------ANAC58     <---------MYB46(3)  --------->At4g35610                                   <---------ANAC58  <---   <---------GLK1(2)     <---------At4g35610  <----------ID1                  <-------TEIL----------- --TOE2(2)              --------->MYB52(2) <---------WRKY18(1)  <---------MYB52(1)  <----------DOF2   tttcagattgttgaaattagacatgttagctgttatcggtgagcttgaacgacaagaagagactgcgttagccatcaaggtgcgttctttacgtgacaat  17274400              --------->At4g35610              <---------At4g35610                                                              ------   --------->HSFB2a(2)                <----------DOF2                                     <---------At4g35610   <---------HSFB2a(2)         --------->At4g35610                                        --------->At4g35610 ----------->RAV1(2)           <---------ZAT2         <-------MYC3       --------->ANAC46 --------->ZAT2 ------ARR11(3)                <---------At4g35610    ------->MYC3<---------ZAT6    --------->MYB52(1) >HVH21  <----------DOF2   <-----------HVH21     ------>ZmHOX2a(2)--------->ALFIN1----------->HVH21 <   ttcttctgggtctttcagcttatgtctcgcttcagctcatctttagtttgatctcatgtgctcatgaagtgttcgacgaaatgcctgaacggagctaaca  17274500  Previous    Next  AGI:  At3g46870.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21332.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 17273968    to: 17275460    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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