Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->CCA1(2)                                                             <---------ARR14(3)                                                             --------->ARR14(2)                                                             <---------ARR11(3)       <XXXXXXXXXXXXXXXXXXXXMIR776                           --------->ARR11(3)             --------- --------ARR14(2)                                            <---------ARR14(2)             <-------- -----ANAC58                                               --------->ANAC58                ------>MYB46(1) -----ANAC46                   --------->YAB1              --------->ANAC58   ----------->RAV1(1) -----ANAC58                 --------->ANAC58              ----------->ARR10 <---------ALFIN1-------- -NtERF2                     --------->AtLEC2         <---------ETT(2)    --------->ANAC46 ------>MYB83 ------------------TaNAC69(2)--------->ANAC46     ------->TEIL<---------GLK1(1)           --------->WOX13(1) --DEAR3(1)      <---------ARR14(2)         ------>ZmHOX2a(1)--------->ARR14(3)    <---------GLK1(2) -RAV1(1)  <---------ATHB12  --------->ANAC58     <---------ARR14(2) <---------GLK1(1)<-----------GT1   gaattcaacaccaatagtggatttagattccaagcaaaactcattcctggtgaatctcgacaagatattcgatttcccaacaccagaatcaccaatcaac  17259300  --------->TOE1(3)                                                            ------>MYB83  --------->TOE2(3)         ==============================HOX2a_HOX2a          ------>MYB46(1)  --------->YAB1          <---------ARR11(3)                                 --------->TOE1(2) <<<<<<<<<ARR2            <-----------ARR10                       --------->ANAC58 <<<<<<<<<ARR1            --------->AGP1           ------>ZmHOX2a(1)    --------->AHL20(2) >MYB46(3)              ------>ZmHOX2a(1)          ====================HOX2a_HOX2a               ---- -ATHB12        --------->YAB1        --------->ANAC46            --------->ANAC58        ----------- ->YAB1      --------->YAB1 ------>ZmHOX2a(2)  <-----------GT1  ------>ZmHOX2a(2)       ---------->DOF2   acaatcttaaacaaataatcatattcctgatctactctatgcgtcattttctccttctctcttcgatctcgcaataaaacctacaaattcgaaagaaaaa  17259400                                              ------->GAMYB                                             --------->ANAC58                                --------                                             --------->ANAC58     --------->ANAC58          <--------                                           --------->MYB52(1)     --------->ANAC58          <--------                                          --------->TOE1(2)       --------->ANAC55(1)       <--------                 <---------DAG2         <------ZmHOX2a(2)         --------->ANAC46         <-------TEIL                 <----------DOF2       --------->ARR14(2)     --------->ANAC46  ----------->GT1    --         <----------DOF2               <---------ARR14(2)   --------->DEAR3(2)  <----------ID1     -- ------>DOF2  <-----------GT1          --------->AGP1<----------ID1        --------->At4g35610   ---- >GT1<---------GLK1(2)                 <---------ARR11(3)  ------->TEIL    <---------At4g35610  <----   aaagacagaaactttattacttttctccaaaatcaaacccagatccaacgaaattaagacgaacccacaagtaattcagaagacgaaaaacgattcgtgt  17259500       <---------ANAC58       <---------ANAC46       <---------RAP2.6(2)       <---------ANAC58      <---------LBD16 ------->AtSPL8   ----------->GT1 -ANAC58 <-------GAMYB                         ---------->DOF2 -ANAC58 <------NtERF2   --------->RVE1(1) ------>ZmHOX2a(2) -ANAC46<---------MYB46(3)                <------ZmHOX2a(2)                                       <-- ------->TOE2(3) <---------HSFB2a(2)     <---------ARR11(3)                                      ---- ------->TOE1(3)----------->GT1          --------->ARR11(3)                        <---------MYB46(3) --->TEIL--------->At4g35610             --------->AGP1    <----------DOF2 --------->AHL20(2)    ---- -----CCA1(2) ------->TEIL       <---------AHL20(2)---------->DOF2       <----------DOF2     --------   accttaatggcggatgaatcgagaaaaatatcgaattttttgagatctataaagaaagaaactttgagtaagaagctttaaatgtttgttctcactcaca  17259600                                                                                        --------->ARR14(2)                                                                                 ----------->GT1                                                                                --------->DAG2                            <---------AHL20(2)                                 ---------->DOF2    *TSS -------ATHB12        <---------ANAC58                                  <------ZmHOX2a(1)        ---- ----->ANAC58         <---------ANAC58                                --------->ALFIN1  <---------ARR14(2) ----->ANAC58       <-----------GT1          ---------->ID1  ---------->DOF2  <---------ATHB12  <---- ->YAB1<------ZmHOX2a(1)    --------->AHL20(2)     <<<<<<<<<TBF1   <------ZmHOX2a(1)  ---------->TaMYB80   atcaatggaggaaaatggaatttttcttgtttaatttgatgggcttcgtcttcttcttcgtgagaaagaggagaggagcaataaagtgaatatacggtgt  17259700                                                                                          -------->HAHB4                                                                                          --------->ATHB12                                      <---------ANAC58                                    <--------ATHB1                                      <---------ANAC58                                    <---------ICU4                  >>>>>>>GRF7     <-----------HVH21                                      --------->ICU4                 <-----------RAV1(2)  <---------ANAC46                                   <---------ATHB12       ------->TEIL              ==========================bZIP_DOF          <---------bZIP60(2)       <---------ARR14(2)        ==========================bZIP_DOF          <---------REM1(1)       <---------ARR11(1)        <---------bZIP60(1)                         ========================       --------->ARR14(2)        <---------DEAR3(1)                          <---------TGA1a      <---------CCA1(2)          <---------O2                                <-----------RAV1(1)   --    --------->ANAC55(1)          <---------TGA1a  <----------ID1        <---------At4g35610        <-    --------->ANAC55(2)          --------->TGA1a=======================================bZIP_DOF <----    --------->ANAC46             <---------bZIP60(2)         <---------ZAT14 <---------O2<---------YAB1    <---------ANAC55(2)          --------->bZIP60(2)  =================================bZIP_DOF------ --->TEIL      <-----------HVH21 --------->O2   ---------->DOF2      <---------ANAC58   <---------TOE2(3) -----CCA1(2) ----------->HVH21  --------->bZIP60(1)  ---------->DOF2<---------ANAC58<---------MYB52(2)   atctatacgtatctctgtgtcagggaatagaaacgacgtcgcgtttgagaaaaagacaaagacttcagttatcgtgctgatgtggcaactaatgattcgt  17259800                                                                                    -------->ATHB1                                                                                    --------->ATHB12                                                                                    <---------ICU4                                                                                    <--------ATHB1           ---------->DOF2                                                ---------->DOF2       <------NtERF2                                                    --------->DOF5.7(2)      ----------->GT1                                                 <---------ANAC46   <---------ZAT2                                                     <---------ANAC58   --------->ZAT2                                                     <---------ANAC58 =====================bZIP_DOF        -------->ATHB1             <---------ICU4     --------->YAB1 ------->At4g35610                    --------->ATHB12           --------->ATHB51  <---------YAB1 --------At4g35610                    --------->ATHB51          <---------YAB1     <---------ATHB51 < -----MYB52(1)                       <---------YAB1             <---------AHL20(2) <---------ATHB12 - --->TOE2(3)--------->DAG2       ----------->GT1            <----------DOF2        --------->ICU4  --   tagcaggctggcaaaaagtaagagcatgttccaaggggtattattggaaatgtagttttgagctttataattgcgttaaagagcaatgattgtatttgtg  17259900           --------->YAB1          <---------YAB1        -------->HAHB4        --------->YAB1       ----------->GT1       --------->ICU4                                                          <------ZmHOX2a(1)       <---------YAB1--------->TOE2(3)                              --------->YAB1  ----------->GT1   --------->bZIP60(2)                      ----------->GT1 <---------TOE2(3) ---------ZAT14--------->ANAC58                  --------->TOE2(3)  <---------ICU4                 -- -------->ZAT18--------->ANAC46                  <----------DOF2   --------->ICU4              ------ ------->ALFIN1--------->ANAC58            <-----------GT1  >>>>>>>>>TBF1  --------->ICU4  --------->WRKY38(1)   agtgtggtaatgataataagcaacgtcaatttgaaaatgtcgaattaacaactttaatagaagaagaaaataatgaaatgaggatgtgatgaattgacca  17260000                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                     --------->AHL20(2)                                                     <---------YAB1             <------NtERF2                                                     <---------AHL20(2)       <---------DEAR3(1)                                                    --------->AHL20(1)     <-----------RAV1(1)                                                    --------->AHL20(2)  <---------ARR14(2)                                                    <---------AHL20(1)  --------->ARR14(2)                                                    <---------AHL20(2)<---------MYB46(3)           <- ------->ZAT14    <---------AHL20(1)           --------->AHL20(2)    <---------AtMYB61    <---------MYB52(1) --->ZAT6        --------->YAB1            ------>ZmHOX2a(2)      --------->ALFIN1 --------->ATERF1(1)   ctacattcccaacttcccataatatttgtaagaatatagttctgatccatataatataattaaacaatgtggtggttctggtggcgatggccgatgggca  17260100                           <----------DOF2                         <------NtERF2                        <---------RAP2.3(1)                        ------>NtERF2                        <---------ERF1                       --------->ATERF1(2)                       <---------DEAR3(1)                       <---------ANAC58                       <---------ANAC58                       <---------RAP2.6(2)                       <---------RAP2.3(2)                       <---------RAP2.3(3)                       <---------ANAC46                      --------->ATERF1(1)                      --------->RAP2.6(3)                    ----------->HVH21                              <---------DEAR3(1)                    --------->ALFIN1                             <-----------HVH21                  <---------O2                                  --------->ANAC46                  <-----------RAV1(1)----------->RAV1(1)     <---------ARR14(2)               <XXXXXXXXXXXXXXXXXXXXXMIR167D                 --------->ARR14(2)               <XXXXXXXXXXXXXXXXXXXXMIR167A/B --------->REM1(1)<-------TEIL              --------->ARR11(3)  --------->ANAC58      ----------->GT1         --------->YAB1 --------ATHB12<------ZmHOX2a(2)  --------->ANAC58     <---------ZAT6<------NtERF2   aatgaagatggtagtggatcatgtggcggctttagaaggcaacatgctacaagtctagtggaaaatacgtcggagattgcgatggtaataggctaatagc  17260200  Previous    Next  AGI:  At3g46830.1    Description:  AtRABA2c/AtRab11A (Arabidopsis Rab GTPase homolog A2c); GTP binding. Identical to Ras-related protein Rab11A (RAB11A) [Arabidopsis Thaliana] (GB:Q96283); similar to AtRABA2d (Arabidopsis Rab GTPase homolog A2d), GTP binding [Arabidopsis thaliana] (TAIR:AT5G59150.1); similar to Ras-related protein Rab11C (GB:Q40193); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 17257329    to: 17259698    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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