Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ARR14(2)                             <---------ARR14(2)                         <---------LBD16                    --------->ARR14(2)                    <---------ARR14(2)                   <---------CCA1(2)                  <-------MYC2                  ------->MYC2                  <-------MYC3                  ------->MYC3         --------->WOX13(1) <---------MYB52(1)    <---------TOE2(3)  <---------SPL7                                       <-------TEIL -->GLK1(1)      <---------ANAC58                                      ---------->DOF2 ---GLK1(1)      <---------ANAC58------>ZmHOX2a(1)                --------->At4g35610           <---- ->ARR14(2)      -------------->OsCBT                             <-------GAMYB                 <---- --GLK1(2)  <---------ICU4 --------->LBD16       <-----------HVH21<---------At4g35610           <----   ccgatttagattaatcagcgcgtgtcttccggttcctgttcgaattggaaatgtcagtttcttcattcagttgaaaagttcattagcaaaacacaattgc  17239300                              <---------AHL20(2)                              <---------ICU4                             --------->AHL20(2)        --------->AHL20(2) --------->YAB1        <---------AHL20(2)<---------YAB1    --------->ICU4        <---------AHL20(2) <------ZmHOX2a(1)       <---------AHL20(1) -----ANAC46             --------->AHL20(2)                         <---------AHL20(2) -----ANAC58             --------->AHL20(1)                         <-----------GT1         <-------- -----ANAC58     ----------->GT1     <-----------GT1       <-----------GT1  ------>ZmHOX2a(2)      --   ttaggaatatttatttgtatagaaaaatataataaatataaacagtctcaaattcgatgattttctctattaacttgatcgctgttctctgatttaactg  17239400                                                                         <---------REM1(1)                                                                     <---------AHL20(1)                                                              <---------ANAC55(1)                                                              --------->ANAC55(2)                  <-                                 <---------AHL20(2)           <---------ANAC55(2)                  --                                 --------->AHL20(2)           <---------ANAC46                     <-                               --------->TOE2(3)              ----------->GT1                      --                               --------->TOE1(3)              <---------ANAC58        ---------->DOF2                            <-----------GT1                   <---------ANAC58    <---------At4g35610                      <---------YAB1                    --------->ARR11(3)        --------->At4g35610                   --------->GLK1(2)                    <---------ARR11(3)     ---------->DOF2    --- ---GT1     --------->GLK1(1)  <----------DOF2         --------->YAB1--------->AHL20(1)       ------- ---->ZmHOX2a(2)  <---------GLK1(2)             --------->CCA1(2)    --------->ARR11(3)       <------   atccctcaaaaccgatatcaaattctgatttaactttaatttcattttggatacaaatgatattacgtgaaaatattgtagcaaagctgaaagtatttta  17239500                                                                                   <------------CBF                                                                                  --------->ATHB12                                                                     --------->TGA1a                                                                     <---------TGA1a           <---------TOE1(2)                                         <---------O2 -------->ATHB1         <------NtERF2                                               --------->ANAC55(2)         --------->LBD16                                             --------->O2<---------YAB1        --------->ANAC58                                             <---------bZIP60(1)        --------->ANAC58                                             --------->bZIP60(1)       <---------LBD16                                               <---------ANAC46     <---------TCP20                                      --------->CCA1(2)    <---------------AGL15     --------->PCF5                                      <---------ARR14(2)    --------------->AGL15     --------->PCF2          <---------ANAC46            --------->ARR14(2)   <-----------------AGL3     <---------PCF2  --------->GLK1(2)                   <---------ARR11(3)   ----------------->AGL3     <---------PCF5 --------->ARR11(3)            --------->bZIP60(2)<---------ANAC58     <---------TCP16(1) <-----------RAV1(1)  ------>MYB83--------->ARR11(3)   <-----------------AGL2 --------ARR14(2)   --------->ARR14(2)       --------->ANAC58        <---------ANAC58 ------->ARR14(2)   <---------ARR11(3)       --------->ANAC46        <---------bZIP60(2) --------ARR11(3)   <---------ARR14(2)       --------->ANAC58     ----------->TGA1--------->ATHB51 ------->ARR11(3)   <---------GLK1(2)        ------>MYB46(1) --------->TOE2(3)----------------->AGL2 ------>RVE1(1)   <---------YAB1 --------->DAG2   --------->REM1(1)  <---------ANAC55(2)      ------- -->AHL20(2)   <------ZmHOX2a(2)---------->DOF2 ----------->RAV1(1) ----------->STF1          ------- ---AHL20(2) <------ZmHOX2a(1)  ===============================================bZIP_DOF    <---------YAB1   atatctgggcccgcaggatcaagattctgtggcgaaaagttcagaccaagccacatcaagatatgttaatgacgtggcattctattattggctatgaatc  17239600                       --------->LBD16          <----------DOF2             --------->ANAC58      --------->ANAC58  --------->HSFB2a(2) --------->TOE2(3)   ---------->DOF2  --------->ANAC58  <---------HSFB2a(2) ----------->GT1 --------->MYB52(1)   --------->ANAC58 <---------LBD16      <---------ANAC55(2)------->GAMYB     --------->ANAC46 >TEIL       --------->ANAC58      --------->ANAC58       *TSS -->GLK1(2)---------->DOF2         --------->ANAC46   <---------ZAT18   tgttctggataacaaaagcatcatccgtaaaaaacacaaacaacgaaagtcttttttgcactcgccatggtgtctcatcttcaatgtatggcatccacat  17239700                                                                                           --------->ZAT14                                                                                           <---------ZAT14                                                                                          --------->DEAR3(1)                                                                                         <------NtERF2                                                                                        <---------ATERF1(1)                                                                                        ------>NtERF2                                                                                       <---------ALFIN1                                                                                       --------->DEAR3(1)                                                                                      <------NtERF2                                                                                      <---------ABI4(2)                                                                                      --------->ATERF1(1)                                                                                     <-----------HVH21                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                    --------->ANAC46                                                                                  --------->DEAR3(1)                --------->YAB1                                                    <---------ALFIN1              --------->AtLEC2            <---------------AGL15                <---------ALFIN1              --------->ANAC58           <-----------------AGL3                ------->GAMYB              --------->ANAC58        --------->AtMYB61                        --------->AtMYB61              --------->ANAC46    --------->WRKY38(1)                         <---------MYB55(2)           <-------TEIL           --------->WRKY12                            --------->MYB46(3)       --------------->AtSPL3     --------->ETT(2)                          <---------DOF5.7(2)     <       <---------TOE2(3)          <---------ETT(2)                         --------->WRKY38(1)    <--   <---------ANAC58               --------->DEAR3(1)<----------DOF2       <---------MYB52(1)<--------   <---------ANAC58         <---------ZAT2------>ZmHOX2a(1)               --------->DOF5.7(2)    ----   tgtttacttgaggtacaagcaaaacgtctaagctcgtcgacctcctcttaatggcttcaagttcaacttcattcccgttaaccaccgcgccaccgcaggg  17239800           --------->LBD16               --------->ANAC58         <---------LBD16           --------->ZAT18       <-----------GT1             <---------ZAT18                                   <---------LBD16  ----------->GT1                 --------->ALFIN1            --------->LBD16  <---------ICU4 >>>>>>>GRF7                     --------->REM1(2)           <---------HSFB2a(2) <---------YAB1 -----------RAV1(2)             --------->ALFIN1  <---------ANAC58             --------->YAB1 ---------HVH21               ------->GAMYB  --------->MYB52(1)               <---------YAB1 ---RAV1(2)----------->GT1  <---------At5g28300   <---------ANAC58        ------------------>ATHB9  - ----->ALFIN1         <---------TOE2(2)  --------->ANAC58   <---------LBD16   --------->ICU4---------   tgtcaggtttaaccggagaaaaccgaggttaaccgtgtgggctaagcaaacggcgtttcaactcgggaaaacgaagggtgatgatgactcggaggggaaa  17239900                                                                                                <----                                                                                                -----                                         --------->LBD16                 <---------ARR14(2)     <----                                         ----------->HVH21               ------->TEIL    <---------ANAC46                                       <---------LBD16             ----------->TGA1    --------->ZAT14                                      --------->MYB52(1)           ----------->HVH21   <---------ZAT14                                      <---------At5g28300        <---------MYB46(3)   <----------DOF2                                     <-----------GT1           <---------MYB52(1)--------->MYB52(1) --------->DAG2                 <--------P       <---------bZIP60(1)     --------->ARR14(2)    ------ --------->DOF2                 <---------MYB52(1)         --------->MYB52(1)------>ZmHOX2a(1) ------ -->GT1  <---------ARR14(2)    <---------MYB52(1)--------->bZIP60(1)     --------->GLK1(2) <---------ZAT6   caaaaagggaagaacccgttccagtttgatttcggtaagttaccggacatgaagtcactgataccggttgtgacgaatccttctaccggtttagtgtttg  17240000                   ------>ZmHOX2a(1)                   --------------->AtSPL8                   --------->LBD16                 ------>ZmHOX2a(2)            --------->LBD16                <------ZmHOX2a(2)            <---------ANAC55(2)                --------->GLK1(2)            --------->ANAC55(2)               <---------GLK1(2)      <---------At4g35610               --------->ARR14(2)     <------MYB83               <---------ARR14(3)     <------MYB46(1)               --------->ARR11(3)    <---------MYB46(3)           <---------CCA1(2)       ---------->DOF2               <---------DEAR3(1)       --------->ANAC58  --------->MYB52(1)                <---------ANAC46          --------->ANAC58 --MYB46(1)    --------->ARR14(3)   <---------ANAC58          --------->ANAC46 ------>GT1    <---------ARR11(3)   <---------ANAC58       --------->ARR14(2)                    <--- --MYB83       <---------ARR14(2)<---------RAP2.6(2) --------->ZAT2                        --------->ARR14(2) --->MYB46(2)----------->ARR10 <-----------RAV1(1)   <---------ZAT2                        <---------ARR14(2) --->MYB59 ---------->DOF2 <---------YAB1   <---------LBD16<---------ARR14(2)             <------ZmHOX2a(1)   gtaataacagaaagaaagatcctggtactatttttgtggctggtgctacgggacaagctggtatacgcatagctcaaacgctcttacaacgaggattcag  17240100                                                  <---------RAP2.6(2)                                                  <------NtERF2                                                  <---------------------WRI1                                                  <---------ANAC46                                                 <---------LBD16                                        --------->ZAT2                                        <---------STY1(2)                                        --------->STY1(2)                                        <---------ZAT2                            ------>NtERF2       <---------bZIP60(2)                         --------->At4g35610    <---------ANAC46               ----------->HVH21     <---------MYB59         --------->ALFIN1<---------ZAT2------>MYB83                                              ----        <---------MYB52(1)--------->ATERF1(1) <-----------HVH21   <---------LBD16            --------       --------->LBD16   <---------At4g35610 <-----------RAV1(1)<---------ARR14(2)      --------->AHL20(2)      <---------DEAR3(1) --------->ZAT2------>MYB46(1)          --------->ARR14(2)    <----------DOF2 ------ZAT6    ------>ZmHOX2a(1)  <------ZmHOX2a(1) <------NtERF2 <-------TEIL        ------>ZmHOX2a(1)   tgttcgagccggtgttcctgaccttggagctgcccaggacctagctcgtgtcgcggctacttacaaggtccggttttgtttttaagtcctttaattcata  17240200  Previous    Next  AGI:  At3g46780.1    Description:  PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. similar to binding / catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT3G18890.1); similar to unknown [Populus trichocarpa] (GB:ABK95703.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 17239658    to: 17242186    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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