Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------HSFB2a(1)                                                                   --------->ARR14(2)                                   --------->ANAC46                <---------ARR14(2)                                   --------->ANAC58              --------->DEAR3(1)                                   --------->ANAC58           --------->ANAC58                                 <---------ALFIN1             --------->ANAC46                                --------->ZAT14             <---------ALFIN1                                <---------REM1(2)      <------ZmHOX2a(2)                    <-----------HVH21                 --------->AGP1 --------->HSFB2a(1)       --------->TOE2(3)     ------>MYB83             --------->ARR14(2)                   --------->ANAC58       --------->TOE1(3)     ------>MYB46(1)          <---------ARR14(2)                   --------->ANAC46     ------->TEIL<---------At4g35610            --------->YAB1--------->ANAC58             --------->ANAC58 --------->DOF2  --------->At4g35610        ------>ZmHOX2a(1)--------->ZAT18<---------ALFIN1 ---DOF2    --------->YAB1--------->MYB46(3)==================HOX2a_HOX2a  ----------->HVH21   tcaaaagaaccttagcatcatctgtcaaaccaactacacgctcttcctgatcatcagatcgagcacgccgaacttccctcacccttgaagtactcgctac  17219600                                                                                                   --                                                                                                   --                                                                                                <----                                                       ---------->DOF2                        <------             <---------TOE2(3)             <---------ANAC58      <----------DOF2              <------            ---------->DOF2                <---------ANAC46--------->ARR11(3)               <--------       <---------YAB1------>ZmHOX2a(1)     <---------ANAC58<---------ARR11(3)      --------->YAB1  --   tactcgatgctcattaaagtttcctatcccatacatctcaagtttgcgagtaacatccaaagttcttcttttgagggttttgatatcatcaagtatgttg  17219700      ------>ZmHOX2a(1)  ------->TEIL                                                                                      - ------->ANAC46                                                  --------------->AGL15              < ------->ANAC58               --------->WOX13(1)                 <---------------AGL15              - -----SPL7                  --------->WRKY18(1)     --------->REM1(2)                               - ---------AtSPL3          <------MYB46(1)           <---------ZAT14    <---------HSFB2a(2)          < ---------AtSPL8          <------MYB83  --------->ANAC58      <-----------GT1                       - ---RAV1(1)           <---------YAB1    --------->ANAC58  <----------DOF2                   --------- ------->ANAC58       <-----------RAV1(1)           --------->ZAT14    --------->HSFB2a(2)  <--------   tacgcatccttcttatcgcttattatgttggtcaatctcatcaagcctagtctgtgtagtcttttttctagtttcagaaaataggtgtccaaaacatctt  17219800       --------->ANAC58       --------->ANAC58       --------->ANAC46  --------->TGA2(2) <-----------HVH21 <-----------TGA1 -------->O2 ---------O2                                                                                        < -------->ANAC46                                                                                  <-- -------->bZIP60(1)                                                                              ---- ---------bZIP60(1)                  <----------DOF2                                             ---- -------->bZIP60(2)            <---------ZAT18                                                   ---- >ARR11(3)                     --------->ZAT18            <-----------HVH21                     ----- -ARR11(3)                     --------->ZAT14         <----------DOF2          <---------TOE2(3)----   cgacgtcataagcaatgtctaaaaccagttttgtccactcttttgagacctcatcttctttgtcacaaacttcaacatttttgagataaacttggatgca  17219900                          ------>ZmHOX2a(2)                          ====================HOX2a_HOX2a                        <---------ARR14(2)                        --------->ARR11(3)                        --------->ARR14(2)                                               <---------MYB52(2)                        <---------ARR11(3)                                               --------->MYB46(3) ---------WRKY12     <---------HSFB2a(2)              <----------DOF2               --------->ANAC46 ---------HVH21      --------->HSFB2a(2)   <<<<<<<<<<<<<<<<<LFY                <----------DOF2 ----->ANAC46      ==============HOX2a_HOX2a<---------YAB1                    --------->HSFB2a(1) ----->ANAC58 --------->At4g35610         --------->YAB1                      ------>ZmHOX2a(2) ----->bZIP60(2)   ------>ZmHOX2a(1)     <---------ATHB12                   <---------ARR11(3) -->TEIL      <---------At4g35610      ------>ZmHOX2a(1)                    --------->ARR11(3) ----->ANAC58 <---------ZAT2  <----------DOF2--------->ATHB12             --------->ETT(2)------->GAMYB   cgtcaactctgtcttcagctcctctagatcgtctttgactcctatcaacattggcgcttcttcgatgagatagttgtcgatctttcccacaacaaactct  17220000                                     <------ZmHOX2a(2)                                    --------->ARR11(3)                                    --------->ARR14(2)                                    <---------AGP1                                    <---------ARR14(2)                                   <------ZmHOX2a(1)                       <---------ARR14(2)                       --------->ARR14(2)                      =======================HOX2a_HOX2a                      ======================HOX2a_HOX2a                 ----------->RAV1(1)<---------ARR11(3)         -------->P   <------ZmHOX2a(1)                                                      <-------      --------->At4g35610=================HOX2a_HOX2a<---------TOE2(3)              =================      <---------At4g35610------>ZmHOX2a(2)           <---------YAB1                 ------->TEIL  ===========================HOX2a_HOX2a       <---------YAB1                       -------->P     --  ------>ZmHOX2a(2)<-----------RAV1(2)------>ZmHOX2a(2)<------------CBF            <-----------GT1 ==   gtgatcgcatctaccattgccacaggatcgagttgaaggatctaaaaatatgaataagattgaaactatgttttgttttttgtatcaacctttcaaattg  17220100           --------->O2           --------->TGA1a           <---------O2           --------->ANAC55(2)           <---------ANAC55(2)           =================bZIP_DOF      ----------->HVH21                                                    --------->ANAC58 -----CBF>>>>>>>>>>>>WRKY18                                               --------->YAB1 ====================MYC_MYB------->TEIL                               <---------HSFB2a(2)      ----- -------->DOF2   <----------DOF2      <---------YAB1         --------->YAB1--------->ANAC58 --------- ====================bZIP_DOF    <----------DOF2----------->GT1 --------->YAB1     <-----------------AGL1   caaaagccttgacacttgactttgtggatgtatgtcttttatatttgaacaggttatatcgtctcataatattctataagcactatcccttgttggcaat  17220200                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              =======                                                                                            ---------                                                                                            <--------                                                                                       <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                   <---------O2                                       <------NtERF2   <---------AHL20(2)      --------->ARR11(3)  ------------>CBF                           --------->LBD16  <---------AHL20(1)  ---------->DOF2  <---------TGA1a                                 <---------LBD16 --------->YAB1  ===========================bZIP_DOF                              --------->LBD16<---------AHL20(2) ---->ICU4         --------->O2                   --------->MYB46(3)--------->ALFIN1  --------->AHL20(2) --->CBF           --------->ANAC55(2)       <-----------HVH21   <---------LBD16 --------->AHL20(2)   ttttaaaagagctcgaagtagacgtgataccaatataaactcacaaatgtcaactactagatttcgacccgcggggctaattttttaataaaatttatat  17220300                                                                                <------MYB83                                                --------->At5g28300          <-------GAMYB                                                <-------GAMYB               --------->MYB46(2)                                              <---------TOE1(3)             --------->MYB111(2)                                              <---------TOE2(3)             <---------MYB46(3)         <-------TEIL                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <------MYB46(1) ----------->GT1                       <---------TOE1(3)                    --------->MYB52(2) --->ARR11(3)                          <---------TOE2(3)                    --------->MYB55(2) --->AHL20(1)                      ------->TEIL----------->GT1              --------->MYB111(1) ----AHL20(1)                   <---------ANAC55(2)  --------->YAB1       <---------MYB52(1) ---------AGL15                 --------->ANAC55(2) <---------YAB1      <---------YAB1      --------- =================================================================================MADS_MADS <-------- >AHL20(2)                  <---------GLK1(2)<---------At5g28300  --------------->AGL15<---------YAB1 -AHL20(2)             --------->YAB1  --------->MYB59           --------->TOE2(3)   <-----------GT1   attgagtaaaattcgtatagttgaataatagattatgtatttaggtttacggttataatatgtgttttcttaatatgttagttggtattacgattaaaat  17220400                                                                                            <--------                                                                                         <---------ICU4                                                                                        --------->ICU4         <---------AHL20(2)                                                        ----------->GT1   <---------ANAC46                                                            --------->AHL20(1)   ----------->GT1  --------->ANAC58                                           <---------AHL20(2) ----------->GT1    --------->ANAC58                                           --------->AHL20(2) >AHL20(2)    ---------->DOF2      <---------ANAC55(2)   --------->YAB1       --------->AHL20(2) -AHL20(2)--------->YAB1           ----------->GT1  --------->AHL20(2)        <---------AHL20(2)    <   gtatagtgtatataataaaagcacgataaactgtattatgtaaaattctaaaaaaaaaatcatcttggattttagactaaataatttgtgaaaattacaa  17220500  Previous    Next  AGI:  At3g46710.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Putative disease resistance RPP13-like protein 2 (RPP13L2) [Arabidopsis Thaliana] (GB:Q9STE5); similar to disease resistance protein (CC-NBS class), putative [Arabidopsis thaliana] (TAIR:AT3G46730.1); similar to RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13), ATP binding [Arabidopsis thaliana] (TAIR:AT3G46530.1); similar to RPP13-like protein [Arabidopsis arenosa] (GB:AAS93912.1); similar to RPP13-like protein [Arabidopsis arenosa] (GB:AAS93910.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NB-ARC; (InterPro:IPR0021 Range:  from: 17217474    to: 17220017    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version