Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ----------->RAV1(2)                          <---------ARR14(2)                    ----------->TGA1                    ----------->HVH21                  --------->YAB1                  ------>ZmHOX2a(2)                  ===================HOX2a_HOX2a             ========================HOX2a_HOX2a             ------>ZmHOX2a(2)            =========================HOX2a_HOX2a            <------ZmHOX2a(2)            --------->CCA1(2)                                    --------->ARR14(2)           --------->ARR11(3)              --------->ANAC55(2)   --------->AGP1     <---------ANAC58     --------->ARR14(2)          --------->MYB52(1)                   <-------TEIL     <---------ANAC58     --------->ARR11(3)          <---------DOF5.7(2)               --------->HSFB2a(1)     <---------ANAC46  --------->ANAC55(2) <---------ANAC46      <---------ARR14(2)     <---------At4g35610    <------NtERF2====================HOX2a_HOX2a   --------->TOE1(3)                    --------->At4g35610   --------->MYB55(2)  <---------ANAC55(2)<---------LBD16    ------>ZmHOX2a(2)          <---------ZAT2   <---------MYB46(3)  <---------ANAC46 ----------->HVH21   <------ZmHOX2a(2)           <---------HSFB2a(1)  <---------RAP2.6(2)--------->MYB52(1)<-----------HVH21   <---------ARR14(2)           --------->HSFC1(2) --------AtMYB61 <------ZmHOX2a(2)    --------->bZIP60(2)  --------->ARR14(2)     <---------LBD16 --ANAC58  <---------ARR11(3)        --------->LBD16--------->DOF5.7(2)          --------->MYB52(1) --ANAC58  --------->ARR14(2)      <---------LBD16 --------->TOE2(3)           ----------->HVH21 --ANAC46  <---------ARR14(2) ------>ZmHOX2a(1)   --------->ANAC55(2)       --------->TOE1(2)       < --bZIP60(2)--------->ARR14(1)=====================================HOX2a_HOX2a--------->SPL7<-------- -->STF1  <---------GLK1(1) ------>ZmHOX2a(2)     <---------ANAC55(2)     <---------------AtSPL3    - >HVH21   --------->GLK1(1)<------ZmHOX2a(2)      <---------ANAC46<------ZmHOX2a(2)     <---------HSFC1(2) >TGA1   ----------->ARR10<---------GLK1(2)<---------ANAC55(2)   <---------ARR11(3)  <---------MYB52(1)   tttggtggctggagatccgatcgtgacggatcctgaagccgggtcacgggttacgttaacggatccagatccaaagaatgtacgaccggaagcttcgtag  17148500                  --------->MYB52(1)                 ----------->TGA1              ------>NtERF2             --------->ARR14(2)             <---------ARR14(2)            --------->RAP2.3(1)            <------NtERF2            --------->ATERF1(1)           <---------ATERF1(1)           <---------RAP2.3(1)          <---------DEAR3(1)          --------->ALFIN1         --------->ATERF1(1)         <------NtERF2                                                               ------>ZmHOX2a(2)         <---------LBD16                                                             ================        <---------ERF1                                                              =================        <---------RRTF1(1)                   --------->At4g35610                    <------ZmHOX2a(2)        <---------RAP2.3(1)                 --------->ARR14(2)                      --------->CCA1(2)       <---------DEAR3(1)                   <---------ARR14(2)                     --------->ARR11(3)       --------->ATERF1(2)                  --------->GLK1(2)                      <---------ARR14(3)       <---------RRTF1(2)                  <---------GLK1(2)                       <---------ARR11(3)       <---------O2 <---------DREB2C(2) ================================HOX2a_HOX2a<---------ARR14(2)       <---------RAP2.3(2)              ------>ZmHOX2a(2)                          --------->ARR14(3)       <---------ATERF1(2)              =============================HOX2a_HOX2a   --------->ARR14(2)       <---------RAP2.3(3)             ==============================HOX2a_HOX2a  <---------GLK1(1)       <---------RRTF1(3)              =================================HOX2a_HOX2a--------->AGP1       <---------ANAC46                <------ZmHOX2a(2)                         ----------->ARR10       <---------RAP2.6(2)            <---------ARR14(2)         ===========================HOX2a_HOX2a       <---------bZIP60(1)           --------->GLK1(1)           ==========================HOX2a_HOX2a      --------->RAP2.6(3)        <---------DEAR3(1)           <------ZmHOX2a(1) <------ZmHOX2a(1)    ----------->HVH21          <-----------HVH21              =============================HOX2a_HOX2a    ----------->TGA1<---------DEAR3(1)--------->ARR14(2)      ==============================HOX2a_HOX2a ---------ZAT14  ----------->HVH21   <---------GLK1(1)<---------ARR14(2)  <---------At4g35610   <---- -ANAC46------>NtERF2         --------->ANAC46        --------->ARR14(2)  --------->At4g35610<------- -------->ZAT14----------->RAV1(2) <------NtERF2 ---------->DOF2 <------ZmHOX2a(1)--------->GLK1(1) <   agagtagtgacggcggagcctgacggtggaatacgtcggagatcggaatctgaaaggaactggaggaggacatggaagcggaggagatctgctagggcgg  17148600             <---------ANAC58             <---------ANAC58             <---------ANAC46             <---------TGA1a             --------->TGA1a             <------NtERF2            ------>NtERF2           <---------ANAC46          --------->ATERF1(1)          <------NtERF2         <---------ERF1         ------>NtERF2         <---------ORA47(2)         <---------RAP2.3(1)         <---------DEAR4(2)         <---------ATERF1(1)         <---------RAP2.6(1)        <---------RRTF1(2)        <---------RRTF1(3)        <---------ATERF1(2)        <---------DEAR3(1)        <---------RAP2.6(2)        <---------DREB2C(2)        <---------RAP2.3(3)       --------->ATERF1(1)      <------MYB83      <---------ATERF1(1)      <------MYB46(1)     <---------DEAR3(1)     --------->MYB111(2)           <------ZmHOX2a(1)     --------->MYB46(2)         --------->ATERF1(1)    <--------P<-----------HVH21 <------NtERF2    --------->ALFIN1          <---------ANAC46                   <-------GAMYB    ===================MYC_MYB--------->ALFIN1                  ----------->GT1              <------- ======HOX2a_HOX2a            <---------DEAR3(1)             <------ZmHOX2a(1)              <-------- ======HOX2a_HOX2a           <------NtERF2                 --------->ALFIN1           <---------HSFB2a(1) --NtERF2<---------RRTF1(1)  --------->ATERF1(1)         <---------ANAC46         --------->LBD16 --LBD16<---------RAP2.3(2)<---------DEAR3(1)         <---------DEAR3(1)        <---------LBD16<----- ------ZmHOX2a(1)          --------->ALFIN1          --------->SPL7            --------->MYB52(1)   -   aaggaggtaggcggcgcgtgaggtccaaggaggcggaggagaattgagaattgggaacggcgaggagggttaatgagtttctaccggagagttcggcagc  17148700                                                                                  <-------GAMYB                                                                                  <------NtERF2                                                                                 <---------DEAR3(2)                                                                                <---------ANAC46                                                                                --------->ALFIN1                                                                               <------NtERF2                                                                              <---------ATERF1(1)                                                                              <---------DEAR4(2)                                                                              <---------RAP2.6(1)                                                                              <---------RRTF1(1)                                                                              ------>NtERF2                                                                             --------->DEAR3(1)                                                                             <---------ATERF1(2)                                                                             <---------RRTF1(2)                                                                             --------->ATERF1(2)                                                                             <---------DEAR3(1)                                                                             <---------ANAC46                                                                             <---------RAP2.6(2)                                                                             <---------RRTF1(3)                                                                             --------->ALFIN1                                                                             <---------RAP2.3(3)                                                                            <------NtERF2                                                                            <---------ABI4(1)                                                                            ------>NtERF2                                                                          <---------RRTF1(2)                                                                          <---------RRTF1(3)                                                                          <---------RAP2.3(3)                                                                   --------->DOF5.7(2)                                                                   <---------MYB52(1)                                                                 ----------->GT1<---------DREB2C(2)                                                                 <---------bZIP60(1)                                                                 <---------ANAC46<---------MYB46(3)                                                              ----------->HVH21<---------ABI4(1)                                                              ----------->TGA1<---------ORA47(2)                                                             --------->ATERF1(1)<---------DEAR3(1)                                                             <------NtERF2<---------ANAC58                                                             --------->At5g28300<---------AtMYB61                                                            <---------DEAR3(2)<---------RAP2.3(1)                                                            <---------ATERF1(1)--------->ATERF1(1)                                                            <---------MYB46(3)<---------ERF1                                                           <---------ANAC46<---------ATERF1(1)                                                           <---------DEAR3(1)<---------RAP2.3(2)                                                          <---------ABI4(1)<---------ERF1                                                         <---------RAP2.3(1)--------->ATERF1(1)                                                        <---------DEAR3(1)<---------RAP2.6(2)                                                        <---------RAP2.3(2)<---------RRTF1(1)    <------NtERF2                                       <---------RAP2.6(2)<---------RAP2.3(1)   --------->LBD16                                     --------->RAP2.6(3)<---------DEAR3(1)  <---------HSFB2a(2)                                  <---------ORA47(1) <---------RAP2.3(2) <---------LBD16                                       --------->SPL7--------->MYB52(2)         <---- --DEAR3(1)              ---------->DOF2              <------ZmHOX2a(1)   <---------ANAC58   <------ZmHOX2a(1) -At4g35610    <------ZmHOX2a(1)                     ----------->HVH21    <---------ANAC46--------->CCA1(2) -NtERF2 --------->CCA1(2)                       <------ZmHOX2a(1)--------->TOE2(3)--------->ALFIN1 - ----->NtERF2--------->ALFIN1              ---------->DOF2<------NtERF2  <---------LBD16 <---------ARR14(2)   gatgccggaagagacgaggaggtttgagaaagatgagagattagggaaagaggagaggacggcggtgacgttaattgcggcggcggtggaagataggagg  17148800                                                            <---------AHL20(2)                                                          <---------YAB1                                                        --------->ATHB51                                                        --------->AHL20(2)                                                       <---------MYB52(1)            ---------->DOF2                            --------->ICU4             <------MYB46(1)        <---------TOE2(3)                         --------->ANAC58                <------MYB83        --------->MYB59                           --------->ANAC58              <---------WOX13(1)        --------->DAG2                           --------->SPL7       <------MYB46(1)        <---------TOE1(3)                        <-------TEIL         <------MYB83----------->GT1  --------->AHL20(2)           ----------->GT1<---------ANAC58       --------->MYB59 ---------->DOF2 --ZmHOX2a(1)          ----------->GT1        <---------ANAC58       --------->MYB46(2) ---------->GT1       ----------->GT1   <---------TOE2(3)<---------AHL20(1)    <------------CBF   agaagtaaataaggtaatgcgagaagggtaaaatgggaaattgagattacgttcgccattattttttgagttaggtcatgagattggtaaagagaagaac  17148900                                                                 <---------YAB1                                                                <---------AHL20(2)                                                   <------MYB83 --------->AHL20(2)                                                   <------MYB46(1)                                                  --------->MYB55(2)                                                  --------->MYB46(2)                                                  <---------AtMYB61                                                  --------->MYB111(2)                               <                                                  <---------MYB46(3)                           <-----                                     --------->ALFIN1    --------->ANAC58                      <-----                                   <---------ANAC46<---------ANAC46                            <-----                                   <---------bZIP60(2)   --------->ANAC58                   ---------                                 <---------ZAT14  --------->MYB111(1)           <---------MYB52(1) <-                        --------->CCA1(2)   <---------ZAT14    --------->AHL20(2)     <------------CBF   acagagaaggaagtgagtggatagagagatgggagtgatgtgtgagtgaagtttggtggacgaaattaaaattagagacatcgttgggaattgtatgacg  17149000   <---------MYB46(3)   --------->MYB55(2)                                                        <---------HSFC1(2)  --------->ALFIN1                                                           --------->HSFC1(2) ---------ANAC46                                                         <---------ZAT18            < ----ANAC58                                                       <---------ANAC58                  - ----ANAC46                                       <-----------HVH21<----------DOF2                --- ----ANAC58                                  <------------CBF     <---------ANAC58            ------- -->HVH21                              --------->At4g35610    --------->CCA1(2)              <------- --------DEAR3(1)                  --------->MYB52(1)  ---------->DOF2<---------ANAC46       --------   cgcggtgtttgggagtttgaagttcacgcgtagaacaaaacagatgtcattgtgtcagaaagagagatgcttttgtggacacttctagtcttgtagtgat  17149100                                                                <---------ANAC46                                                                <---------ANAC58                                                             --------->ALFIN1                                                            <-------MYC4                                                            ------->MYC4                                                            <-------PIF5                                                            ------->MYC3                                                            ------->PIF5                                                            <-------MYC3                                                            <-------MYC2                                                            ------->MYC2                                                           ==========================================bZIP_DOF                                                           --------->TGA1a                                                           <---------PIF3(3)                                                           <---------O2                                                           --------->O2                                                           --------->PIF3(3)                                                           <---------TGA1a                                                         <---------ALFIN1                                                       ----------------->PIF3(1)                               --------->AHL20(2)     ------>NtERF2                               <---------AHL20(1)     --------->PCF2                               <---------AHL20(2)  <---------ANAC58                               --------->AHL20(1)  <---------ANAC58                        <---------WOX13(1)      <-----------RAV1(1)              <---------ICU4                       <------------CBF      <---------AHL20(2) <---------ANAC58 --------->YAB1 ---------GLK1(2)     --------->ATHB12<---------TOE2(3)<----------------PIF3(2) --------->ICU4 -------->ARR11(3)   <---------AHL20(2)   ------->TEIL--------->ZAT18         <---------ICU4 -------->ARR10  <---------AHL20(2) <---------AHL20(2)<---------ZAT18         --------->YAB1       <- -->ATHB12      --------->AHL20(2) --------->AHL20(2)<---------PCF2        --------->YAB1 ---------->DOF2 --ZAT6       --------->ARR11(3)--------->AHL20(2)--------->ALFIN1       --------->AHL20(2)<---------TOE2(3) ->ICU4       <---------ARR11(3)<---------AHL20(2)<-----------RAV1(1)----------->GT1    <---------YAB1   tagattttggtgagaagatttatttgattgaaataaaattaatgtattttatgtggtgcccacgtggggtatagttttaataataatgtcattaaagttt  17149200                                                <---------ANAC55(2)          <-------MYC3                   --------->At4g35610          ------->MYC3         --------->AHL20(2)     --------->TOE2(3)       <---------AtLEC2        --------->AHL20(1)     --------->TOE1(3)       <---------ANAC58        <---------AHL20(2)     --------->YAB1                          -------       <---------ANAC58  --------->At5g28300    --------->ANAC55(2)               <---------ANAC46 <---------ANAC58     <---------ZAT2     --------->ZAT14                          <---------ANAC58 <---------ANAC58     --------->ZAT2  --------->At4g35610             <---------ZAT14     ----------- ----------GT1      ------>ZmHOX2a(1) <---------At4g35610       --------->YAB1    <---------ANAC58---   ttttcgtttgcatgtgagtttcctagctgtgaattaattaagctgcagtcacttaatcttaatcaacaatagtacaatgcaattacttggattagataaa  17149300                     <<<<<<<<<RAP2.2                    <---------TOE2(3)         <------ZmHOX2a(1) -->AHL20(2) <---------At5g28300             <---------ANAC46      --------->GLK1(1)             ---- >GT1   <---------YAB1          <-----------GT1      <---------AHL20(2)                          <--- ------>RVE1(1)  <---------MYB52(1)        <---------ZAT14   ---------->DOF2                     ----   atatcgaattaggattaccgtttagattgttttttttccctcaagtttagtgtatttgatttagaaaggaattcaaatagtttatgagactatttagata  17149400  Previous    Next  AGI:  At3g46550.1    Description:  SOS5 (SALT OVERLY SENSITIVE 5). Identical to Fasciclin-like arabinogalactan protein 4 precursor (FLA4) [Arabidopsis Thaliana] (GB:Q9SNC3); similar to FLA10 (fasciclin-like arabinogalactan-protein 10) [Arabidopsis thaliana] (TAIR:AT3G60900.1); similar to fasciclin-like arabinogalactan protein 9 [Gossypium hirsutum] (GB:ABV27480.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 17147441    to: 17148859    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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