Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ICU4                                                          --------->ICU4                            <---------YAB1                <---------YAB1                       <---------ANAC58                 <--------HAHB4                 <--------HAHB4                    ------->MYC2                        --------->YAB1                 --------->ATHB12                    <-------MYC4                        <---------ICU4                 <---------ICU4                    <-------MYC2                       --------->ICU4                  --------->YAB1         ------->TEIL  <---------ANAC58      --------->ARR14(2)                       <---------YAB1      <---------YAB1<-------PIF5            --------->GLK1(1)                         --------->ICU4    --------->YAB1  ------->MYC3            <---------CCA1(2)                       --------->YAB1    <---------ICU4  <-------MYC3            <---------GLK1(1)                      <---------YAB1   <---------ATHB12 <-------PIF4    <---------ANAC58   <---------YAB1           <---------MYB52(1)   --------->ICU4   ------->PIF4    <---------ANAC58 --------->YAB1            <-------GAMYB   <---------ATHB51 ------->PIF5  <-----------GT1   <---------ATHB12        <---------At5g28300 --------HVH21    ------->TEIL <---------YAB1<---------ARR14(2)         --------->WOX13(1)   gtcaaataatgaatcttatgcacatgcttgattattttacttgcacatatccctatcatcattatcacatttgtcaattaccgttatcatcattactctc  17138800                                               <----------DOF2                                             <------ZmHOX2a(2)                                             <---------RVE1(1)                                            --------->ARR14(3)                                            <---------ARR14(3)                                            --------->AGP1                                            <---------ARR14(2)                                            --------->ARR14(2)                                            <---------ARR11(3)                                            --------->ARR11(3)                                          ----------->ARR10                                      ------>MYB46(1)           <---------DAG2             ------>MYB83<-----------GT1 --------->YAB1           <----------DOF2          <---------MYB55(2)      --------->TOE2(3)        <---------ARR11(3)          --------->MYB46(3) <---------DAG2      --------->LBD16              --------->ANAC58    <----------DOF2     --------->HSFB2a(2)           --------->ANAC58<-----------GT1-------->HAHB4     <---------HSFB2a(2)      --------->ANAC46------>ZmHOX2a(2)  <---------YAB1      <----------DOF2   attcttcccagaactttttcagcaatttccatacctcacccactaagatcttttaccctttttcttaattatagtttggatagcactcttttacatagca  17138900                                                                                --------->GLK1(2)                          --------->HSFB2a(2)                  <---------WOX13(1)   ---------->DOF2                   --------->AHL20(2)                        --------->ATHB12 <---------KAN4(1)        <-------GAMYB     <---------HSFB2a(2)            <-----------GT1  --------->AHL20(2)     <---   ctgaaatttcggttgaacacataaattactagaaactagaaggaaatgttactgaaatttcactgattgtctaaaattgaataatctaaagaaaatggcc  17139000                                                   --------->WRKY12                                                   --------->WRKY38(1)                                                   ----------->HVH21                                                  <-----------HVH21  ---------->DOF2                                                 <------MYB83      --------->At5g28300                                                 <------MYB46(1)<---------LBD16                                                 <---------ANAC58--------->HSFB2a(2)                                                 <---------ANAC58<---------HSFB2a(2)               --                                          <---------ANAC58  --------->HSFB2a(1)                  <---                                          <---------ANAC58  --------->HSFC1(2)                <------     <----------DOF2                    <---------YAB1     --------->ARR14(2)                 <------    <---------DAG2                    --------->YAB1      --------->ARR14(2)                 <-------    --------->TOE2(3)                <---------ATHB12     <---------GLK1(2)                <--------- <-----------GT1                  --------->ZAT6<---------MYB46(3)----------->GT1       --------->ARR14(2) -------DOF2                   <-----------GT1  <---------DEAR3(1)--------->LBD16       <---------ARR14(2)   ttttaacctttttcttaggcccaaatgggctcattaccactcatgcttgttcggtgacccgattcttccggtaaaacagagcctaaaccgtattttcagg  17139100                                            ------->MYC3                                            <-------MYC2                                            <-------MYC3                                            -------->ABF1                                            ------->MYC4                                            <-------MYC4                                            ------->MYC2                          --------->TOE1(3)--------->TGA1a                          --------->TOE2(3)<--------ABF1    <------MYB46(1)       <-----------------AGL3    <------MYB83          <---------MYB59  --------->ANAC55(2)             <---------ATHB12         - ------->MYB59            ----------------->AGL3                       ------------>CBF            <- -----P                 -------->P         <---------ANAC55(2)  <------------CBF                <---- ---TOE2(3)             ------>MYB46(1)    <---------TGA1a     --------->CCA1(2)                ----- ---TOE1(3)             =============================MYC_MYB  --------->ARR11(3)       --------->RAP2.6(3) ----RAV1(2)            ------>MYB83       <---------O2       <---------ARR11(3)      --------->MYB52(1) --GT1      --------->TOE2(3)              --------->O2     ----------->ARR10       <---------MYB52(2)   ttaggctggtgttttcttaattctccaacctaaaaatagatggacacgtgtctatagaggctgagatattggtctcaatgaagaaaactaacggctcaga  17139200                                          --------->LBD16                                         --------->HSFC1(1)                                         <---------HSFB2a(2)           <---------ARR11(3)            --------->HSFB2a(2)           --------->ANAC58  --------->REM1(2)           <---------ANAC58                         --------->ANAC58           --- -------->LBD16               <---------ANAC46                      <---------ZAT18               <-- --------ANAC46               <---------ANAC58  *TSS    --------->ANAC58                  <----------DOF2 -----ARR14(2)         ---------->DOF2   <---------HSFC1(1)       --------->ANAC46    <----------DOF2 ---->ARR14(2)     <----------ID1       <---------LBD16 --------->ANAC58        <---------ALFIN1  ---   cccgtgtatgaacgatattaagggccaaagttgcttctgttttccagaaatttttgaaacccaatttcagggcacgattccacaacctctttcttttctt  17139300             <-------TEIL       --------->TOE2(3)      --------->ANAC46   ------>ZmHOX2a(2)  <------ZmHOX2a(2)  --------->CCA1(2) --------->ARR14(2) --------->AGP1 <---------ARR11(3) <---------ARR14(2)                                                                          -------- --------->ARR11(3)                                                                 <---------AHL20(2) <---------AGP1                                                                     --------->AHL20(2) ------>HSFB2a(2)                                                       <------NtERF2        -------- -------HSFB2a(2)               <---------AHL20(2)                     ----------->GT1       -------- ------>HSFC1(1)      <-------TEIL       <---------AHL20(2)<---------YAB1           <---------YAB1   ctagatctacgtaaattcatcaggtacatgttattttttttgtttatttgatgtcaaaattttgatcacaaggaggcaaaaccaatataaatgtaacgct  17139400                                                                                    <---------ICU4                                                                                    -------->ATHB1                                                                                    --------->ATHB51                     --------->MYB52(1)                                             --------->ATHB12                  --------->ANAC46             --------->AHL20(2)                   <---------AHL20(2)                  --------->ANAC58             <---------AHL20(2)                   -------->HAHB4                  <---------ANAC55(2)          <---------AHL20(1)                  --------->ICU4                  --------->ANAC55(2)          --------->AHL20(1)                  <---------ATHB51 <---------ANAC58 --------->ANAC58    ----------->GT1                            --------->YAB1 <---------ANAC58 --------->ANAC55(1) <---------MYB46(3)                        --------->AHL20(2) ->ANAC58  <---------YAB1             <---------ICU4                            --------->ICU4 ->ANAC58  <---------TOE2(3)      <---------AHL20(2)                     <---------WOX13(1) ->ZAT6 <---------YAB1           --------->AHL20(2)                 <---------YAB1 <---------YAB1<---   aatgcgtttgattatggtatacgtaacgaattagatttaatggttacattttattgttttagatttagttatgagattggcattaattattggtgtttcc  17139500                                                                 <---------RVE1(1)                                                                <---------ARR14(2)                                                                <---------ARR14(3)                                                                <---------ARR11(3)                                                                --------->ARR14(2)                                                                --------->ARR11(3)                                                                --------->ARR14(3)                                                              ----------->ARR10                                                          --------->At5g28300                                                        <---------DEAR3(1)                                                       --------->SPL7                                                       <---------ORA47(1)                                                      <------NtERF2                                                      ------>NtERF2                                                     <---------SPL7                                                     ----------->HVH21                 --------->MYB52(1)                                                    <---------ANAC58                   <---------DOF5.7(2)                                                    <---------ANAC58                 --------->DOF5.7(2)                        <---------TOE2(3)           <---------ANAC46               ----------------->AGL1                   <-----------RAV1(1)    ----------->GT1----------->GT1 --------->DEAR3(1)               <---------ANAC58  --------->At4g35610<---------RAP2.6(2)--------->At4g35610 -------DOF2   <---------ANAC58  --------->ZAT2    <---------LBD16     <---------At4g35610   tttgaatttgctatgtttcttatgttgatgtaatcagctagagattgaaaaatggcggacggtgaagatattcagccgctcgtttgcgataacgggactg  17139600                                                                                             <------MYB46(1)                 --------->DAG2                                                              <------MYB83                ---------->DOF2                     <---------ANAC58                   <--------P             --------->YAB1                         <---------ANAC58                  --------->REM1(2)      <---------TOE1(3)                          <---------YAB1                      --------->ALFIN1      <---------TOE2(3)            <---------ARR14(2)                              <---------ANAC58    <---------WRKY12 <----------DOF2--------->CCA1(2)                              <---------ANAC58    <---------WRKY38(1)            --------->ARR14(2)             --------->ANAC58 <---------ANAC46   --------->WRKY18(1)             <---------ARR11(3)             --------->ANAC58<-------TEIL      <   gaatggtcaaggtaatcaaaaagctttagagaaacaagatttgtgaatgttattatgtgccataagttaagcaattcaactatgtgcgtgtaggctggtt  17139700  Previous    Next  AGI:  At3g46520.1    Description:  ACT12 (ACTIN-12); structural constituent of cytoskeleton. Identical to Actin-12 (ACT12) [Arabidopsis Thaliana] (GB:P53497); similar to ACT4 (ACTIN 4) [Arabidopsis thaliana] (TAIR:AT5G59370.1); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT4 (ACTIN 4) [Arabidopsis thaliana] (TAIR:AT5G59370.2); similar to Actin (GB:Q05214); similar to hypothetical protein [Vitis vinifera] (GB:CAN83697.1); similar to Actin (GB:O81221); contains InterPro domain Actin/actin-like; (InterPro:IPR004000); contains InterPro domain Actin, conserved site; (InterPro:IPR004001) Range:  from: 17139248    to: 17141195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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