Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->YAB1                 <---------YAB1             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->ARR11(3)           <-----------ARR10                              --------->ARR11(3)           <---------AGP1                        ------->TEIL           --------->ARR14(2)                 --------->ANAC58           <---------ARR14(2)              <---------ARR14(2)           <---------ARR11(3)              --------->ARR14(2)           --------->AGP1               >>>>>>>>>TBF1     <---------ARR11(3)                     <---     <---------ZAT14           <---------AHL20(2)----------->RAV1(1)                             ---- ---------->HVH21<---------ATHB12 XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B                   <---------TOE2(3) -GLK1(2) <---------CCA1(2)   <---------ATHB12--------->ANAC58       <---------MYB52(1)       ------>ZmHOX2a(1)   cagtgaccacacagatctaatcatagatgctaataaatcgaagaagaaacgcaccagataaatcttgctcccttggctacaaaatttgagataatccttc  17137300                                                                <----------DOF2                                                          <---------MYB46(3)                                                        <---------MYB52(1)                                                      <---------MYB46(3)                                                      <---------DEAR3(2)                     --------                                                     ================================HOX2a_HOX2a                                                 ----------->HVH21                           --------                                         --------->ARR14(2)   --------->MYB52(2)             --------                                         ------->TEIL------>ZmHOX2a(2)                  <----------ID1                                         <---------ARR11(1) <---------MYB52(1)          <------ZmHOX2a(1)                                         <---------ARR14(2)<-------GAMYB            --------->TOE2(2)          <---------ANAC58               <-----------ARR10--------->MYB52(2)        --------->TOE1(2)          <---------ANAC58              <---------ARR14(1)----------->GT1          --------->YAB1 ------At4g35610           ---------->DOF2     <---------At4g35610            ------>ZmHOX2a(1)    <- ----->At4g35610      <-------TEIL      <---------CCA1(2)<-------TEIL        --------->TOE2(3)   ----   gctgaacacatagcttccttcaaattcatcaaagtcttcaacgtatcttcgctgatcggttcgttactttctctaatttcctcaaacataggaacaagca  17137400                                 <---------ZAT14                                                  <-- ->ANAC58                        --------->ZAT14                                     ---------->DOF2 ->ANAC46 --------->ANAC46 <---------HSFC1(2)          --------->GLK1(1)      --------->REM1(1)   --- ->ANAC58------>ZmHOX2a(1) --------->HSFC1(2)      --------->YAB1        <---------DOF5.7(2)     ---- ---------DOF2          ---------->DOF2         --------->YAB1         <---------MYB52(1)      <----- ----->At4g35610    <---------YAB1          --------->ANAC46           --------->DOF5.7(2)     ------   gctttaatctcctcgctagattataacaaagcttcttcactgttatacgataatcagaaatcgcagcaatctcgttaactacatcgattaagctctgtgc  17137500                                                                                                 ----                                                                         =========================HOX2a_HOX2a                                                                     <-----------GT1     <---------ARR14(2)                                                               ------>ZmHOX2a(2)         <-----------ARR10                                                               =================HOX2a_HOX2a    ------                                                              <------ZmHOX2a(2)          --------->ARR14(2)                                                              ==================HOX2a_HOX2a <--------                                                             <---------ARR14(2)          --------->ARR14(3)      <----------DOF2                                        --------->ARR14(2)          <---------ARR14(3)    --------->HSFC1(2)                                    --------->ANAC55(2)            <---------ARR11(3)    <---------HSFC1(2)                                    <---------ANAC55(2)           <---------GLK1(1) -------At4g35610                                         --------->ANAC46  --------->LBD16------>ZmHOX2a(2) ------>At4g35610                                        <---------LBD16 ========================HOX2a_HOX2a ------->RAV1(1)                                        --------->MYB52(1)<---------LBD16--------->ARR11(3) ----ZAT14                  <---------GLK1(2)           <-----------GT1  ------>ZmHOX2a(1)<------ZmHOX2a(2) --->ZAT14      ------>ZmHOX2a(1)                <-----------GT1  <---------MYB52(1)    --------->GLK1(1)   agcagaagctttctcttcctccattgaattgattcttctctgtttaaaaattcacgatttacggatccgtttttcctccggagaagatggagatctttcc  17137600               <---------ANAC46               <---------ANAC58                              ---------->DOF2               <---------ANAC58                         --------->TOE1(2)        --------->ZAT14   <----------DOF2             --------->DAG2                        <--------        <---------ZAT14 <---------At4g35610 <---------------AGL15                       <------------CBF ----->LBD16--------->ALFIN1  <---------TOE2(3)      ---------->DOF2        *TSS---------->DOF2 ----------->AGL1       --------->At4g35610----------------->AGL3       --------->GLK1(1)   <-------- --DOF2<<<<<<<<<<<<<<<<<LFY ---------->DOF2----------------->AGL2       <---------GLK1(1)   <--------   cgattgagactccagtggcgagattgagcttaaaggaagaagagaaccatttgcagaaagtgcgaaagagagagatttctgagaaagagagattgtgtga  17137700                                      --------->MYB52(1)                                     ----------->TGA1                                     ----------->HVH21                                   --------->At4g35610                                   <---------At4g35610                          <---------DEAR3(1)                          --------->DEAR3(1)                          <---------ANAC46          <------------CBF                                -                     --------->MYB52(1)--------->RAP2.6(3)                                         <- -ANAC58     <----------DOF2 <---------ANAC46   <---------At4g35610 --------->GLK1(2)            ---- -ANAC46     <---------DAG2 <------NtERF2   <----------DOF2        <---------GLK1(2)        --------- -ANAC58  <------ZmHOX2a(1)------>NtERF2 ------>NtERF2      <---------------AtSPL3        <---------LBD16   gagagaagacgaggacttttcgaaaacggcgtcgtttagctgacggctttagcttattgcaacttgtacgattctctcggcttaagaactaaaccggaac  17137800                         <---------PCF2                         <---------PCF5                                               --------->AHL20(2)                         <---------ARR14(2)                                      <---------AHL20(2)                         --------->TCP15(1)                               --------->YAB1                         --------->TCP20                              <---------AHL20(1)                         --------->ARR14(2)                           --------->AHL20(2)                        ----------->HVH21                             <---------AHL20(2)          <--                        <---------SPL7                           --------->AHL20(2)   --------->ATHB51                       --------->LBD16                           <---------AHL20(1)   <---------ICU4                      <------NtERF2                              --------->AHL20(1)   <---------AHL20(2)                     <---------LBD16>>>>>>>>>ARR2                <---------ARR11(3)  --------->AHL20(2)                     --------->LBD16>>>>>>>>>ARR1                --------->ARR11(3)  <---------AHL20(2)                     ------>NtERF2<---------YAB1                 <---------AHL20(2)  <---------AHL20(1) ---------->GT1     --------->DEAR3(1)          <---------AHL20(2)    --------->AHL20(1) <-----------GT1 --------TOE2(3)   --------->ATERF1(1)  <---------YAB1        --------->AHL20(2) --------->AHL20(2) ------>DOF2   ---------->DOF2 <---------ARR14(2)          --------->TOE2(3)<---------YAB1        --- >LBD16       --------->ANAC46 --------->ARR14(2)       <-----------GT1  <---------AHL20(2)      ----   aaaggtaaattcgaccacgaagccgcgggaccggttacgattgtgtttgttttattttttacattaatatattatattatcatttaaattatttctctat  17137900                                                    --------->ANAC58                                                    --------->ANAC55(2)       <---------ARR14(2)                                           <---------AHL20(1)                 --------->ARR14(2)                                           <---------AHL20(2)              <---------TOE2(3)                                           --------->AHL20(1)              <---------ANAC46                                          --------->AHL20(2)   --------->CCA1(2)            <---------ANAC58              --------->YAB1      --------->ARR14(2)            <---------ANAC58 <---------ARR11(3)     --------->ANAC46      <---------LBD16  <-----------GT1            --------->ARR11(3)     --------->ANAC58     <-----------GT1 -------AHL20(2)             --------->AHL20(1)    <---------LBD16    <---------ICU4 ------>AHL20(2)             <---------AHL20(1)   <-----------GT1   ------->TEIL           <--------- ----->AHL20(2)         <---------YAB1   <---------YAB1       <---------ARR14(2)           <---------DAG2   aaaattactaattttcttgtgaaattttgaatatttttcaactattatattttcacggattgaatatacgaatttttacggatatagtggtcactttttt  17138000                    <---------ANAC58        ----------->HVH21                                                 <---------ICU4      ----------->GT1                                  <---------AHL20(2) --------->ATHB12      <------MYB46(1)           <----------ID1         <---------YAB1    <---------YAB1           <--     <---------MYB46(3)<-----------HVH21             --------->YAB1      --------->ICU4    ----------  <---------MYB46(3)<---------ANAC46              ------->TEIL         --------->YAB1     <---------TOE2(3) -DOF2<------MYB83  <---------ANAC58       <---------YAB1             <---------ZAT6 --------->AHL20(2)   gctgtagttggtgacatttttggggtgtcatagaagaacaaaattgttaatgcatttataattttggatttagtgataattgaagaattaaaaaggtttt  17138100                             --------->AHL20(1)                             <---------AHL20(1)                             --------->AHL20(2)                           <---------AHL20(1)                           --------->AHL20(1)                           --------->ARR11(3)                        --------->AHL20(2)                                     ======================                      --------->ANAC58                                         ------>ZmHOX2a(1)                  --------->AtLEC2                                            <---------------AGL15                  --------->ANAC58                                            --------->TOE2(3)                --------->YAB1                --------->AHL20(2)              --------------->AGL15                <---------ICU4        ----------->GT1                        ----------------->AGL3    <---------CCA1(2) --------->ANAC58<----------ID1                         ----------------->AGL2 --------->TOE2(3)--------->ANAC58  ---------->DOF2                         <---------YAB1 ---------GT1  <---------ATHB12 <---------AHL20(2)                   ------->GAMYB            <------ ->GT1       --------->YAB1<---------ARR11(3) <---------AHL20(2) <---------WRKY38(1) ----------->GT1   atacctctatctctctaatcatgcaagaaaatattttaaaaagaaaaattaaaaatagttcaactggacaacgaaattatcctaaaatagttatttcttt  17138200  Previous    Next  AGI:  At3g46510.1    Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing family protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G28830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21678.1); similar to hypothetical protein OsI_010680 [Oryza sativa (indica cultivar-group)] (GB:EAY89447.1); similar to Protein spotted leaf 11 (Cell death-related protein SPL11) (GB:A2ZLU6); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadil Range:  from: 17134724    to: 17137676    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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