Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           -------->ATHB1                         --------->ATHB51                         --------->ATHB12                         <---------ICU4                        <---------ATHB51                        --------->ICU4                        --------->AHL20(1)                        <---------YAB1    --------->ANAC58 <---------AHL20(2)    --------->ANAC58 --------->AHL20(1)    --------->ANAC55(2) <---------AHL20(2)    --------->ANAC46 --------->AHL20(2)                         --------->ANAC58 ------ARR11(1)     --------->AHL20(2)                          --------->ANAC46 ->MYB46(1)    ----------->GT1                                  --------->ANAC58 ->MYB83      --------->LBD16                       --------->DAG2 >GAMYB      <---------ANAC46              --------->YAB1 --------->At4g35610 -->AtMYB61  <---------LBD16              --------->AHL20(2) <-------TEIL >ANAC58    <---------LBD16               <---------ATHB12<---------At4g35610    <---------ANAC46 >ANAC58   <-----------GT1           -------->P    ---------->DOF2     --------->WOX13(1)    --------   atctatacgcattttacgggaaaaaaattattgtatacttaccaataaatataaaaagttagatgcaaggcatcaattagatagagtgtattagaaaaag  17131100                                                                           --------->CCA1(2)                                                                     <---------ATHB12                                                               <-----------GT1                                                          --------->AHL20(2)                                                       --------->WOX13(1) --------->ARR11(3)                                                    --------->ANAC58--------->ANAC46              <--                                                    --------->ANAC58--------->ANAC58            -----                                                  ---------->DOF2   --------->ANAC58           ------                                   <---------ALFIN1--------->DAG2--------->MYB46(3)       ----------- -->DOF2                 ---------->DOF2  <---------ZAT18 --------->YAB1  <---------ARR11(3)   <-----   actcgatcgactcaagggactaatagaaaaagactcaacacttgttcacacataaagcaattaaaaaaccactcaagatatagaatcacagcatgttata  17131200                                                                 <----------ID1              --------                                                        <---------YAB1                       <-------                               <---------ARR11(3)  <---------AHL20(2)                        <------- -------WOX13(1)               --------->ARR11(3) <---------AHL20(2)              <---------YAB1 ---->ATHB51  <---------ARR11(3)                  --------->AHL20(1)        --------->AHL20(2) --->ICU4     <---------AHL20(1)                  --------->AHL20(2)        <---------AHL20(2)      - >GT1------->TEIL         ------>ZmHOX2a(1)    ------>MYB83    <---------------AtSPL8        -------- ----YAB1     --------->AHL20(1)               ------>MYB46(1)---------->DOF2<---------AHL20(2) -----   attgatgaacattcaatatatatgtgtcctctagttcttgaataaaaccaaatttaatatgatataaagaacaaactattaattttgatatttttctcga  17131300                                                                                        <-----------TBP                                                                                       ------->TEIL                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(2)     <-------GAMYB                                                         --------->ANAC55(2)    ----------->GT1                                                        <---------ANAC55(2) ->HSFB2a(2)                                ------->GAMYB                  --------->YAB1 --HSFB2a(2)                             --------->YAB1               --------->At4g35610 --HSFC1(1)                              <-----------GT1              <---------At4g35610<---------AHL20(2) -------->ARR11(3)         <-----------GT1 --------->ZAT6         --------->ALFIN1--------->CCA1(2) ->HSFC1(1)      <-------GAMYB        --------->YAB1        <---------AHL20(2)   <---------AHL20(1) ----->DOF2     <---------MYB46(3) <----------DOF2          --------->AHL20(2)--------->AHL20(2)   aagatgtggttattttggctgttaacatatcacaagactttaataacagtccgattgaaattttaaatgtggagcttacataatatatgaatttatagca  17131400                                                                                                <----                                                                                             <-------                         <---------CCA1(2)                                          XXXXXXXXXXXXXXXXX                        ------>ZmHOX2a(1)                                          <---------At4g35610                      ----------------->AGL1                                       --------->HSFB2a(1)                     ---------->ID1                                                --------->At4g35610                 <------------CBF                                                  --------->HSFC1(2)              >>>>>>>>>>>>>>>>>LFY       <---------REM1(2)                         <---------HSFC1(2)             --------->ANAC46          <---------WRKY38(1)                         <---------ZAT2             --------->ANAC58   ---------->DOF2           --------->CCA1(2)        <---------HSFB2a(1)             --------->ANAC58 XXXXXXXXXXXXXXXXXXXXX>MIR2936      *TSS           <------ZmHOX2a(1)   gtggaatcttggaacaagccattgtccttatcttgaaagagtcaacacagagaattagagagatggagaacaaaactcaagaggaagcttcgaccattaa  17131500                        --------->ANAC58                        --------->ANAC58         <---------ZAT2                      ------>ZmHOX2a(2)          <---------At4g35610                     <------ZmHOX2a(2)           --------->At4g35610                    --------->ARR11(3)           --------->ZAT2           <---------ANAC46          --------->YAB1         ---------->DOF2     <<<<<<<<<NAM   <---------ARR11(3)           ----------->RAV1(2)<---------ANAC58             ---- -----TOE2(3)       <---------AGP1  <---------ATHB12--------->At4g35610                         ----- --YAB1    <---------ANAC58 ------>NtERF2     <------ZmHOX2a(2)     <---------ANAC58  <----------DOF2 XXX>MIR783<---------ANAC58--------->DEAR3(1)<-----------HVH21 <---------At4g35610<----------DOF2<---   tgtttcatcccttgcttgtatagatctcgccaactccaatcttcatcgatcagctgcttcgcttaagcaggcttggctcttcttctttctttttctcaac  17131600           <---------MYB52(1)        <---------TOE2(3)   <--------ATHB1   <---------ICU4                              --------->KAN4(2)   --------->ATHB12                         <-------GAMYB   --------->YAB1              ----------->HVH21  --------->ICU4             <---------ANAC55(2)         <---------HSFB2a(2)  <---------ATHB12 --------->ICU4          <---------MYB46(3)  <---------YAB1  <----------DOF2          <------MYB46(1)                                      <---- ----->TOE2(3)   --------------->AGL15     <------MYB83  --------->HSFB2a(2)                   <----- ---->ANAC46     <---------------AGL15 <---------MYB46(3)>>>>>>>ZML2             <-----------GT1----- --------HVH21 ---------->ID1--------->ANAC55(2)<---------YAB1        <---------GLK1(2)<-----------HVH21   gtcaatgattacggtttggcctttattagttatgtgactagttgttggttattcttgttctaggcatgtctagattgtggatttttctatgtcacaaatc  17131700                           <---------ANAC58                      <---------bZIP60(2)         <----------DOF2                    <------ZmHOX2a(1) --------->ANAC58                   <----------ID1     --------->ANAC58 -----ICU4      ---------->DOF2     ---------->DOF2                                        <--------- ----ATHB12 ----------->GT1<---------ANAC58    <---------ARR11(3)                          ---------- ---->YAB1 <------ZmHOX2a(1)<----------DOF2    --------->ARR11(3)                   ----------->GT1   atggtataagtgaggagttaaaggacgaggctttcgagcaaagcaagaagttctttgctcttcctttggacgagaagatgaaagtcttgaaaaacgaaaa  17131800                                                     <---------ANAC58                             <--                                                     <---------ANAC58                <---------AHL20(2)                                           <---------ARR14(2)                        --------->AHL20(2)                                           --------->ARR14(2)              <---------WOX13(1)     <--                    ------>ZmHOX2a(1)     ------>MYB46(1)                 <---------ANAC58        <--                   --------->TOE2(3)      ------>MYB83                    <---------ANAC46        --- -ID1         --------->MYB46(3)  --------->YAB1     <---------ANAC46     <---------ANAC58  --------- ->GT1     <-----------GT1 <---------CCA1(2)        <-------TEIL    <-----------GT1 --------->AHL20(2)   acatcaaggctattcacccgtccttagtcaaatctctgataaccaaatccatggttcgtgtaaccaagtttcacttgcttgatcaaaaaaatttgttgtt  17131900                                                                                     <-----------GT1                                                                        --------->HSFB2a(1) -------ANAC55(1)                                                       <---------HSFC1(2) -------ANAC46 <---------REM1(1)                           --------->ATHB12          --------->ANAC46 -------ANAC55(2)                                         <---------YAB1--------->HSFC1(2) ------>ANAC55(2) <-----------GT1                ---------->DOF2        <---------HSFB2a(1)   <------ ->ID1   <---------ATHB12                    ---------->DOF2            <---------ATERF1(1)  <-------   aagtgttcccaatcttgttgtaacctctcatggattttaggggattacaaagaaagttttttcattggaatcgaaggctccaacgatacaccattctgtc  17132000  Previous    Next  AGI:  At3g46500.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT3G46480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65454.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 17131465    to: 17133730    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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