Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <----------DOF2                      <-------TEIL             <-----------ARR10                   <---------ZAT2  --------->ARR14(2)                   --------->ZAT2  <---------ARR14(2)                   --------->At4g35610         --------->ARR14(2)                   <---------At4g35610<---------ALFIN1                                   <---------At4g35610            --------->ARR14(2)     <---------TCP20                                       <XXXXXXXXXXX            <---------ARR14(2)   <---------MYB46(3)-------->P   ---------->DOF2          --------->At4g35610        <---------At4g35610 <---------ANAC58   <---------ARR14(2)                        <---------ZAT2        --------->At4g35610 <---------ANAC58   <---------ARR11(1)                 <---------GLK1(2)   agcgattttaagcagaaacacagctgcattacgagcggttccacttccaaatctaccattactcccaaaagaaacatgcttagagattgtctgctgaaca  17106200                              --------->ANAC55(2)                              ----------->GT1                             <---------TOE2(3)                             --------->MYB59                             <---------TOE1(3) --------->LBD16                         <----------DOF2      <---------HSFB2a(2)                    <---------HSFC1(2)        --------->HSFB2a(2)            --------->At4g35610              <---------LBD16     --------->YAB1      <---------HSFB2a(2)            <---------At4g35610    --------->MYB46(3)           <---------YAB1       --------->HSFB2a(2) XXXXXXXXXMIR780.1  --------->HSFC1(2)   <----------DOF2 --------->At4g35610       -------->P  ------   gctcttggaatagcagctactaagcttcttttaggtaacaactctttcccagaagaaacagttgccatcatagagtttctacttctaccagaattatccc  17106300                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                          --------->bZIP60(2)                                     --------->ANAC55(1)                                     --------->ANAC58                                     --------->ANAC46                                     <---------ANAC55(2)                                            -                                     --------->ANAC58                                      --------->ARR11(3)                             --------->ANAC58                                              <---------ARR11(3)                             --------->ANAC58    --------->ANAC46                          --------->GLK1(2)  --------->YAB1--------->ANAC46  <---------ARR14(2)          --------->ANAC46             <---------ARR14(2) --------->AHL20(2)    --------->AHL20(2)------>NtERF2     <------ZmHOX2a(2)               --------->ARR14(2) --->ANAC46     <---------ALFIN1  --------->ARR14(2)      <---------ARR11(3)           --------->YAB1   ccattaaaaatcgattccacacacttaaaataagcaaatacgccacgaaactcgaaacgagatcacaccaatttcatgtcgaaacaatatcaaaatctgc  17106400                                                                                                   --                                                                                                  <--                                                                                            <------ZmHOX2a(1)                                                                                            =========                                                                              ------>ZmHOX2a(2)  ----                                                                              =====================HOX2a_HOX2a                                                                            --------->ARR14(2)   <---                               --------->ANAC58                            ==========================                               --------->ANAC58                            <------ZmHOX2a(1)=========                               --------->ANAC46                            ==========================                             --------->MYB52(1)    ---------->DOF2    ------->TEIL          =========                        ----------->GT1        <---------YAB1      <---------MYB52(2)   ------->GAMYB -------->YAB1       --------->MYB52(1)    --------->GLK1(1)     --------->MYB52(1)  --------->MYB52(1)   aaacaaaatttgcatatataagagaacggataaacggaatcagagaattcttataaagctatgaacaaaacgaaccaggatcgaaatcaacggaggacag  17106500                                       <------NtERF2                                       --------->RAP2.3(1)                                      <---------RAP2.3(1)                                      ------>NtERF2                                      <---------ERF1                                      <---------ATERF1(1)                                      <---------DEAR4(2)                                      <---------ORA47(2)             <---------ZAT6          <---------RRTF1(3)  <---------GLK1(2)                  <---------DEAR3(1) ---->ZmHOX2a(2)                     <---------ANAC46 ----ZmHOX2a(2)                      <---------RAP2.3(3) ====HOX2a_HOX2a                     --------->DEAR3(1) ----->ARR14(2)                      <---------RAP2.3(2) ------ARR14(2)                  <---------LBD16 ====HOX2a_HOX2a                 <---------At5g28300                            --------->DAG2    --- =======================HOX2a_HOX2a <---------ABI4(1)                 --------->LBD16          ------ =====HOX2a_HOX2a      --------->GLK1(2)  ---------->DOF2 <---------ANAC58     ---------->DOF2 ====== =====HOX2a_HOX2a------>ZmHOX2a(2)--------->ANAC46        <---------ANAC58 <-------TEIL  ----------->GT1   atcggaatcgttgtagtgatcggagaatcaaatttcacggcggcgaaagcgagcgagatttcgtcttctctccgaagttcataaagcgaaacagaaaaaa  17106600                             --------->ZAT14                             <---------ZAT18                           <-------MYC4                           ------->MYC2                           ------->MYC3                           <-------MYC2                                                       -------                           ------->MYC4                                                       =======                           <-------MYC3                                                       <------                          --------->ANAC55(2)                                                 <------                          <---------ANAC46                                                 ----------                          <---------ANAC55(2)                            ------->GAMYB    <----------                          <--------ABF1                               --------->MYB52(1)  <----------                          --------->O2                            --------->WOX13(1)     --------->bZIP60(2)                          <---------TGA1a                        >>>>>>>>>GT-1           --------->ANAC46                          --------->TGA1a                     <------MYB46(1)   <------ZmHOX2a(1)                          <---------O2                        <------MYB83   <---------HSFB2a(2)                         <-----------------------TaNAC69(2)   ----------->GT1<---------LBD16---------                        *TSS --------->ZAT18                  <---------ANAC55(2)  ----------->HVH21                      ----------------->PIF3(1)           --------->ATHB12   --------->HSFB2a(2) -------->GT1    --------->ALFIN1                       <---------WOX13(1) --------->WRKY18(1)------- ---->DOF2   XXXXXXXXXXXXXXXXXXXX>MIR826               <------------CBF  ============================ ===================================bZIP_DOF   <---------YAB1--------->MYB59 <-----------RAV1(2)    <   aggaaacaagaacaacacggtgttggacacgtgtactctcccaactgttttgatagcgattgataggtaaatcaacggtccaggagcgacaacgtcacgg  17106700              --------->TCP16(1)   --------->AHL20(2)   ----------->TBP --------->ANAC58 -->TGA1a<---------ANAC55(2)                               ---------->DOF2 ==========bZIP_DOF--------->ANAC58                      --------->HSFB2a(2)                    <---- ---TGA1a<---------ANAC46                             <-----------GT1                           <---- ---ANAC55(2) --------->PCF5                     <---------AHL20(1)                           ------- ->HVH21 <---------ANAC58                        --------->AHL20(1)              --------->GLK1(2) -TGA1   <---------ANAC58                        --------->ARR11(3)            --------->HSFB2a(1) -HVH21 <-------TEIL    <---------MYB52(2)       <---------ARR11(3)            <---------HSFC1(2)  -- >MYB52(1)  --------->WRKY12--------->YAB1      <---------AHL20(2)             --------->HSFC1(2)  -- -->ANAC55(2)<---------TCP16(2)             --------->AHL20(2)            --------->SPL7      ------- ===MYC_MYB --------->WRKY38(1)             <---------AHL20(2)  --------->RAP2.6(2)     <------ZmHOX2a(1) ----------DOF2    --------->ANAC46   <---------MYB52(1) <---------HSFB2a(2)   <---------HSFB2a(1)<--   gccttttaaatacgtggacccaagaaacaaacatcatgctgtttgtttaaatatttttactagaagccgaaaactgtacgaagtttctgaggagaacgta  17106800      --------->ALFIN1      <------NtERF2    <---------ANAC58    <---------ANAC46    <---------ANAC58        --------->ANAC58 -----TOE2(2)               --------->ANAC58 -----TOE1(2)               <---------TOE2(3) -->TOE1(2)              <---------ATHB12 ------->ARR14(2)   ----------------->AGL1                ----------->HVH21 ------->MYB52(1)<---------ANAC58                     --------->HSFC1(2)   <---------HSFC1(2) -->TOE2(2)   <-----------GT1   ----------->GT1       <---------HSFC1(2)   --------->HSFC1(2)     <-- ----ZmHOX2a(1)  <---------ANAC58                  ---------->DOF2      ---------->DOF2   -----------   ggaacggcgtggagttttagcgtccaaatcaaggaagtaaacacactgaaaaacaaagcttcgacagacaaaaacaaagcttctatgaagaatagtataa  17106900                                         ------>MYB83                                         ------>MYB46(1)                                       <---------MYB59                   ---------->DOF2                                       --------->MYB46(3)        --------->ANAC58                                       --------->AtMYB61         --------->ANAC58 --------DOF2                 <---------AHL20(2)              <------ZmHOX2a(1)        ----------->GT1 >GT1                   ----------->RAV1(1)<---------ALFIN1 <---------TOE2(3)  <-------TEIL   cttttaatgtcagtttttttcaagaacaacatttttttcgaccaaacacttcatttcacgttgaggaacgcgattaaaagatgcaagacgggtttattac  17107000                                                                                      ---------->DOF2                                                                                  <---------ZAT6                                                                                  --------->ALFIN1                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                                <---------ANAC58                              <---------AHL20(2)                          <-----------RAV1(1)   <---------ZAT6   ---------->DOF2                 <----------DOF2       --------->ALFIN1      <----   aagtagtgtttggacagtttttcaaagggaatttttttcgataagataaatgagcttttgaactccatagaagatggtgttggagtgtgaaagtgtttct  17107100  Previous    Next  AGI:  At3g46450.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G21540.2); similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G21540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21692.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251) Range:  from: 17103923    to: 17106624    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46460.1    Description:  UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2 13 (UBC13) [Arabidopsis Thaliana] (GB:Q42541); similar to UBC14 (ubiquitin-conjugating enzyme 14), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G55380.1); similar to ubiquitin-conjugating enzyme [Arachis hypogaea] (GB:ABI84264.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 17106863    to: 17108437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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