Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ANAC58          <---------WOX13(1)                      ---------->DOF2        --------->ATHB12                  <-----------GT1       <---------ANAC58       <---------YAB1                  <---------ICU4      --------->STY1(2)                    <----       <---------AHL20(2)           <---------AHL20(2)  <---------MYB59          <---------ANAC58 -------->YAB1                     <---------AHL20(2)<---------ZAT18             <---------ANAC58 ---------->GT1     <-----------GT1--------->AHL20(2)--------->ZAT18  --------->ANAC46<----------DOF2   aattgtaatttgattgggtttttaacaaatatttctattaatttttactagataatgccctaactagcttactcgttactgatgcttcctttgtaattaa  17092700                                                        <---------------AtSPL3                                                        --------------->AtSPL8                                                        <---------------AtSPL8                                         --------->AHL20(2)                            <-----------GT1       ----------->GT1   --------->TOE1(2)                     ----------->GT1     <---------AHL20(2)         --------->TOE2(2)         ------- -----TOE2(3)     ---------->DOF2     --------->YAB1--------->AHL20(2)     --------->MYB46(3) -------   catatacttgacgaaaaaaaaaaaggaaattaacatctaaaaataaaatcaaatgtaaatagtacttaaacatgggaacgactagacgttgatgacaaga  17092800                                           <---------YAB1                                   --------->ANAC58                              ==================HOX2a_HOX2a  <----------ID1                <---------ANAC46        ----------->GT1       <------ZmHOX2a(2)        <-------TEIL                    --------->ARR11(3)     ------>ZmHOX2a(1)       <---------ARR11(3)    <---------TOE2(2)                   <---------GLK1(2)     ================================HOX2a_HOX2a--------->ATHB12  --------->ANAC58   --------->ICU4   ----------->RAV1(2)       --------->ARR11(3) --------->YAB1    --------->ANAC58 ---------->DOF2 -->ANAC58            <----------ID1     ------>ZmHOX2a(1) <---------ICU4         --------->AHL20(2) -->ANAC58          ---------->DOF2--------->ANAC58<---------TOE1(2)              <---------AHL20(2)   catgctcctgtcgttataagaaaaaagacaagatcacaagctcctattattcataggttcattaagacaagacaaactagaaatttaaagattatgtgta  17092900                                                                                       ------>ZmHOX2a(1)                                                                                       ----------->HVH21                                                                                       ----------->TGA1                      <---------AHL20(2)                                             ----------->RAV1(2)                      --------->AHL20(2)                                           <---------ARR14(2)                   <---------AHL20(1)                                           =====================                   --------->AHL20(1)                                           <---------TGA1a                   --------->AHL20(2)                                           --------->TGA1a                 --------->ARR11(3)                        <---------HSFB2a(2)  <---------O2                 --------->AHL20(1)            <-----------TBP                  --------->ANAC55(2)                 <---------ARR11(3)          <----------DOF2                    --------->O2                 <---------AHL20(1) --------->At4g35610    --------->HSFB2a(2) <---------TOE1(2)            ----------->GT1    --------->YAB1=============================================bZIP_DOF  -   aaacttatgctatagagaaaatattttattcattcatcagttgaattctttatgtagtcttgtagaagtaagacatgttctcacgtttcctgacgactta  17093000                <------------CBF          <-------GAMYB         <---------MYB46(3)   <---------CCA1(1)                               ------------>CBF   <---------RVE1(1)                   --------->At4g35610  <---------ARR11(3)                   <---------At4g35610                             --------->ARR14(2)  <---------GLK1(2)                  <-----------RAV1(2)                               <---------ARR14(2)  --------->ARR11(3)     --------->ANAC58   <---------ANAC46                      ----------->GT1 =================MYC_MYB--------->ANAC46   <---------ANAC58                     --------->DAG2 ---------->ARR10        --------->ANAC58   <---------ANAC58                    ---------->DOF2   gtaagattttttggttgaaattgtttcaaggaatatttctcagatggcttatcaacaatgtctgtcttaattttctttgaacaaaagtgaatatggagag  17093100                   ----------------->AGL3                <---------ANAC58                <-------GAMYB                <---------ANAC58                <---------ANAC46               <------MYB83               --------->MYB55(2)               <---------MYB46(3)                                            ------>MYB83               <------MYB46(1)                                               ------>MYB46(1)               --------->MYB52(2)                                           ----------->RAV1(1)              <---------AtMYB61                                        <---------SPL7           <-----------RAV1(1)                                       --------------->AtSPL8           <---------MYB46(3)                                        --------------->AtSPL3        <----------DOF2 --------->YAB1                              --------->RAP2.6(3)          <---   tctcaagaagcttttgttggttgcattaatagcaacttctgccattcaccttgttcaagctcaaaatcaagacggtaccaacatttcaatgtttcaatag  17093200                                                             --------->GLK1(1)                                                            --------->ARR14(2)                                                    <---------------AtSPL8                                              <---------AHL20(2)                                              --------->AHL20(2)                                  ---                                              --------->AHL20(1)                                 ----                                    <---------STY1(1)       <---------ARR14(2)              ---------                                 --------->ZAT6  <---------AHL20(2)                         <--------                            <----------DOF2   <---------AHL20(1)                            <--------                           <---------DAG2     <---------ARR11(3)                           <-------GAMYB        <----------DOF2 <-----------GT1       --------->ARR11(3) <---------AHL20(2)       <------MYB83    <-----------GT1   <-----------GT1   ----------->GT1   ----------->GT1                 <------MYB46(1) ------GLK1(2)       <-----------GT1--------->STY1(1)  --------->MYB52(1)              <---------MYB52(1)   aatttgtttccttttacaaatttttatcacctttagcactaggggtaatatattatggaacggatattcaattttggtttttgtaattcgttcggttatg  17093300                ------>ZmHOX2a(2)                                                        <---------ICU4            ----------->HVH21                                                            --------->AHL20(2) -------->RAV1(1)                                                                       <---------AHL20(2) ------------->AGL1                                           <---------ALFIN1      <---------YAB1 >ARR14(2)<---------At4g35610                              <-----------GT1      --------->TOE2(3) -ARR14(2)=============HOX2a_HOX2a<---------MYB52(2)<---------TOE2(3)          ----------->GT1    --- -MYB52(1)------>ZmHOX2a(1)  --------->AtLEC2      ---------->DOF2  <---------MYB52(1)  --------->AHL20(2)   ccacaatcggtcctctgatcggtattctgctatgcaactaagcatacaactgttaaagtatttcccacccgttcgtacaaaacgttataaataatttcaa  17093400                             <---------ICU4        <---------------AtSPL8        ----------->GT1  --------------->AGL15        --------->TOE2(3)       --------->DAG2    <---------------AGL15--------->YAB1                             --------->YAB1      ---------->DOF2    ------->GAMYB       <---------YAB1            <----------DOF2  <---------TOE2(3) ------>ZAT6            --------->MYB46(3) --------->YAB1<---------AHL20(2) <---------YAB1   acactagaaaaagttacaaaaattcaaccaaaaattgcaatacacttatcattttttcttaaattttaaaactctttgatgaatacaactaagataacta  17093500                               <---------AtLEC2               <---------ARR11(3)              <------                           <---------ANAC58                   --------->ARR11(3)          --------->AHL20(2)                           <---------ANAC58               ---------->DOF2           <----------DOF2            <-----------GT1<---------ANAC46         ----------->GT1                 ------>ZmHOX2a(1)     <---------YAB1  <---------DAG2                ----------->GT1                 --------->TOE2(3)   --------->YAB1    <----------DOF2        <---------------AGL15     --------->ZAT18     <---------AHL20(2)  <---------ATHB51  <---------DAG2          --------------->AGL15     <---------ZAT18<---------MYB52(1)  --------->ICU4  <---------ARR11(3)        =========================================================   tacaattatgtttttttcaatacctttttgtgtgcatgctagattactaatataagttaaaaaaggtcttagttcacaaactaatcctttatttatataa  17093600  Previous    Next  AGI:  At3g46420.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46340.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G07560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45781.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (Inte Range:  from: 17093093    to: 17097519    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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