Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ------->TEIL                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                     <-----------RAV1(1)                               --------->ARR11(3)                   xxxxxxxxxxxxxxxx>smallRNA(i)             <--------ATHB1              <---------WOX13(1)                            --------->ATHB12             <---------ANAC58            ----------->GT1   <---------ATHB12             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------YAB1 <----------DOF2             <---------ANAC58      <---------TOE2(3)       --------->ICU4------>ZmHOX2a(2)         --           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ---------->ID1    <---------ARR11(3)    --------     <---------MYB52(1)   <---------CCA1(2)    <---------AHL20(2)<-----------GT1        <---------ANAC46   tacttcagttatttggattgccaatgttgtatctattagggtatagtatttttttgtcacaatgatttaactcgatcttttggattgtctacgtatagtt  17070500                                                       <---------ICU4           --------------->AtSPL8                      -------->HAHB4        <------NtERF2         --------->ARR14(2)                 <-----------GT1      ----------->GT1      ----------->GT1         <---------ARR14(2)              <---------YAB1--------->YAB1      <---------ANAC46     --------->YAB1                     --------->AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <---------YAB1                   --------->YAB1   --------->ICU4       --------->ETT(1) ------->ZAT6         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->At4g35610     ----------->GT1 --->GT1 --------->GLK1(2)       ----------->GT1      <---------ATHB51   <-----------HVH21         --   aatactatgagaatatgtactagataactatgaaatcgataatattatacaaactaattatgagctacagtaacatgtcggagagatagagaaaataaca  17070600                                                            --------->TOE2(3)                    xxxx                                                            --------->TOE1(3)                    <xxx                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  -------                                                      <---------YAB1                       <---------ICU4                                                    <---------ICU4                     <------NtERF2                                                    --------->ATHB51            xxxxxxxxxxxxxxxxxxxxx                                                    <--------HAHB4      ------>ZmHOX2a(2)  --------->YAB1                                                   --------->ICU4       xxxxxxxxxxxxxxxx>smallRNA(s)                                                 <--------HAHB4       <---------ARR11(3)  <xxxxxxxxxx                                                 <---------ICU4       --------->ARR11(3)  <xxxxxxxxxx                                                --------->ICU4       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->TOE2(3)          <---------CCA1(2)--------->YAB1     xxxxxxxxxxxxxxxx>smallRNA(i)<xxxx    --------->MYB46(3)   <----------DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)     ------>NtERF2 -  <-----------GT1   <-----------GT1 <----------DOF2<---------YAB1 xxxxxxxxxxxxxxxx>smallRNA(i)<------ ------->ANAC55(2)<-----------GT1<-----------GT1<---------YAB1  xxxxxxxxxxxxxxxx>smallRNA(i) <-------   tatgtaacctccattcaatttttctctcttttgtttatctttctctcaccatcattattaaacctcaaacttgatctttccaccatggcaccatcatcat  17070700                              ------>ZmHOX2a(2)                              =================HOX2a_HOX2a     ------>MYB46(1)         <------ZmHOX2a(2)     ------>MYB83  <-----------HVH21   <---------ALFIN1<-----------TGA1   --------->AtMYB61<---------MYB52(1)   --------->DEAR3(1)        ==================HOX2a_HOX2a xxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        ----------->HVH21 -->YAB1       <---------ALFIN1<----------DOF2 xx>smallRNA(se3) --------->DREB2C(2)   <---------At4g35610 xxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxsmallRNA(fl3) --------->ARR11(3) xxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->At4g35610                        <----------DOF2 <x -------->ANAC46  --------->DEAR3(1)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <-----------GT1         <-- ---ICU4    --------->ANAC46<---------ARR11(3)                           --------->AHL20(2)   ------- --YAB1--------->ANAC46  --------->SPL7 ------>ZmHOX2a(1)       ----------->GT1    ------>ZmHOX2a(1)   caacaccaccctcaactccaccgtcagtacgatctttgtttcctctgacattgcaatagaactctatagaaaaaatttactaatccttttagtcatttag  17070800                                                                              <---------ARR14(2)                                       ------->MYC3          <---------ARR14(2)                                       <-------MYC3          --------->ARR14(2)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ARR11(3)                                      =================bZIP_DOF   <----------DOF2                                      <---------O2           <---------ARR11(1)                                      <---------ALFIN1       --------->ARR11(3)                        --------->ATHB12    <----------DOF2  <---------ARR11(3)   ------>ZmHOX2a(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <---------GLK1(1) --------->ARR14(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->O2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------GT1 -------GLK1(1)  --------->AtMYB61    --------->TGA1a       <---------CCA1(2)<---------CCA1(2) -->YAB1      <---------ALFIN1      ----------->RAV1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aattctcaattttcttccacctccattgatttcaagagccacatgtctttttctactcttgcatatctctttcacttccatatcctcttatttctctctg  17070900                                                 --------->TOE2(2)                                                 --------->TOE1(2)                                               --------->GLK1(2)                                               ------->TEIL                       <---------ARR11(3)                                            --------->ANAC46                      --------->GLK1(2)                      <-----------TGA1      --------->ANAC58    <-------TEIL      <---------ARR14(2)                     --------->YAB1         --------->ANAC58--------->AHL20(2)    --------->ARR14(2)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     --------->YAB1     <------ZmHOX2a(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<-----------HVH21       --------->AGP1              <-----------GT1        <-----------GT1----------->HVH21 <---------ANAC46      --------->GLK1(2)         ------------>CBF----------->RAV1(2)<---------MYB52(1)   atttcgatattctttgtaacccatcgtcatgttctacaattaccacacgaacctgtgactcataaattcgtttcttagatccaaaatctgtatgaaaaat  17071000                                           <---------AHL20(2)            <---------GLK1(2)                                          <---------AHL20(1)      ------>ZmHOX2a(2)                                          --------->AHL20(1)     <------ZmHOX2a(2)                           <---------AHL20(2)    <---------YAB1  --------->CCA1(2)                    --------->AtLEC2      <---------ARR11(3)    <---------ARR11(3)                    <---------YAB1       ----------->TBP        --------->AGP1             <---------AHL20(2)                  --------->YAB1    <---------ARR11(3)    <---------ANAC58               --------->ANAC55(2)                 <---------ATHB12   --------->ARR11(3)    <---------ANAC55(2)         <---------AHL20(2)               <---------GLK1(1)   --------->RVE1(1)      <---------ANAC46--------->ARR11(3)               --------->GLK1(1)   --------->CCA1(1)      <---------ANAC58<---------ARR11(3)  -------       <---------YAB1      --------->AHL20(2)   <-----------GT1 --------->ARR11(3) ------->TEIL   acaagtagtatttttggaaatcatgctaataaaacaaatatctatatatttatcaatatttcgtgagatctaacaaaatctcatgtattttaagtaattt  17071100                                     <-------TEIL                                    --------->CCA1(2)                    <------------CBF                <-------TEIL <----------DOF2                       <----------DOF2                  < -->ICU4<-----------GT1 <----------DOF2                        <---------CCA1(2)                    <   tcatgttatttaacaaaatacatatacttttcttttagatacatgttattttcacttaaaaccgtgtttctttagaattgtcatattctatatcaattct  17071200                                                                    <---------AHL20(2)                                                                   --------->AHL20(1)              ----------->GT1                                      <---------AHL20(1)   <---------------AGL15                                     <---------ARR11(3)   --------------->AGL15                                     --------->ARR11(3)  <-----------------AGL3                                    --------->CCA1(1)      <-----------GT1  ----------------->AGL3                            <---------AHL20(2)     --------->YAB1  ----------------->AGL2                            --------->AHL20(2)   <-----------GT1          --- <<<<<<<<GT-1<---------WOX13(1)              ----------->GT1--------->RVE1(1) <---------ICU4    ----- -----------GT1                 <---------YAB1    <---------YAB1   <---------ARR11(3)      <-------TEIL   attaaccaaaaatagattgaaaaatacaagtagtatttttgaaaaacatgttattaaaacaaatatctatatatttatcaacatttcacaagattcaaca  17071300                                                                                   <------ZmHOX2a(2)                                                                                   <---------RVE1(1)                                                                                  <---------ARR11(3)                                                                          --------->AtMYB61                                                                          <---------ALFIN1               <---------ANAC55(2)                                        --------->ZAT6               --------->ANAC46                                          --------->MYB46(3)               --------->ANAC55(1)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)               --------->ANAC55(2)                                      ----------->RAV1(1) <--------               --------->ANAC58                                        <---------ALFIN1   <---------YAB1        ------->TEIL                                                   --------->ANAC46 <---------CCA1(2)   <---------ANAC46                                                 ------>ZmHOX2a(2)<----------DOF2   <---------ANAC55(1)                                            <---------ARR11(3)------>ZmHOX2a(2)  <-------TEIL --------->ANAC58                               <---------ANAC58    --------->ARR11(3) -------->GT1 <---------TOE2(3)                             <-----------GT1       --------->AGP1<<<<< -->GAMYB    <-----------GT1  --------->ICU4<---------TOE1(2) <---------ANAC58   <---------GLK1(1) --   gagttacatgtatttttacgtaatcacatgtaatttttaaaattctcatgttttttttgttttttcttgatctccaccactagagatcttttatctttgg  17071400  Previous    Next  AGI:  At3g46380.1    Description:  unknown protein Range:  from: 17070203    to: 17070881    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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