Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->At5g28300         --------->LBD16               ------->GAMYB                                            -----        ------->GAMYB --------->HSFB2a(2) ---------->DOF2                                   <--------        ----------->GT1       <---------ICU4     --------->ARR14(2)                         ---------       <------------AtMYB77 ----------->RAV1(1)  <---------ARR14(2)                        <---------GLK1(1)     --------->MYB52(1)--------->LBD16--------->ANAC46                                     --------->GLK1(1)  --------->ANAC58    <---------HSFB2a(2)XXXXXXXXXXXXXXXXXXXX>MIR2112-5P               --------->ANAC58  --------->ANAC58    --------->ANAC46--------->ANAC58       ------>ZmHOX2a(2)         --------->ANAC58  --------->ANAC46   <---------LBD16  --------->ANAC58     <---------AGP1            ---------->DOF2   caaaacgcaaccgtgaatatttatccggaacaacattacaacgcaaacgcgaatacaaatcgatctgaaattccaaaatgaaatcactaaagcaaatcct  17031000                                   <---------ARR14(2)                                   --------->ARR14(2)                                   --------->GLK1(2)                                   <---------ARR11(1)                                  <---------ARR14(1)                              --------->MYB52(1)                             <---------ALFIN1                             ------->GAMYB                             --------->AtMYB61                            <---------MYB55(2)                        ------>ZmHOX2a(1)                  --------------->AGL15                       --------->TOE2(3)                 ---------->ID1                       --------->TOE1(3)                 <---------CCA1(2)   <---------ALFIN1 <---------ARR14(2)               <---------ANAC58                      <---------At5g28300 ->ZmHOX2a(1)       --------->ARR11(3)               <---------ANAC58                     <---------WRKY38(1) -ARR14(2)          --------->ARR14(2)         --------->ARR11(3)                       <-----------HVH21 >ARR14(2)   --------->ZAT6 --------->MYB46(3) <---------ARR11(3)               <-------TEIL --------   agacaacactctaaaacactaaaatcctcaaccaccgaatccatagagagttcttccttgtctcttaagagcataaacaacatccatagcagtcaccgtc  17031100                                                                      ------->MYC3                                                                      ------->PIF5                                                                      <-------PIF5                                                                      <-------MYC4                                                                      ------->MYC4                                                                      ------->MYC2                                                                      <-------MYC3                                                                     --------->O2                                                                     <---------O2                                                                     <---------TGA1a                                                                     --------->TGA1a                                                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                     <--------ABF1                                                                     --------->ANAC55(2)                                 --------->ANAC58                    <<<<<<<<<<HY5                                 <---------ANAC55(2)                 <---------ANAC55(2)                                 --------->ANAC58                    --------->bZIP60(2)                                 <---------ANAC46                    <<<<<<<<<<ABI5                                <---------LBD16                 --------->ANAC58                               --------->MYB52(1)               --------->ANAC46                              <------NtERF2                     --------->ANAC58                             <-----------HVH21          ------>ZmHOX2a(2)                             <-----------TGA1           =============================HOX2a_HOX2a                             ------>NtERF2             ==============================HOX2a_HOX2a                            --------->bZIP60(2)        <------ZmHOX2a(2)                     <---------MYB52(2)               --------->ARR14(3)                    --------->ANAC58                  --------->AGP1 <<<<<<<<<<AtMYC2                <---------ZAT6--------->ATERF1(1)     <---------ARR14(3)              --------------------->WRI1              <---------ARR11(3)          <---------ZAT2    <---------bZIP60(1)       --------->ARR11(3)       --------->TOE1(1)        --------->ZAT18     --------->bZIP60(1)       <---------ARR14(2)      ==============HOX2a_HOX2a        <---------ZAT18   ------->GAMYB               --------->ARR14(2)      ------>ZmHOX2a(1)       <---------ANAC58 <---------At5g28300           <---------AGP1------>NtERF2       <---------ANAC58--------->MYB52(1)            --------->RVE1(1)<-------MYC2 ------>ZmHOX2a(1)  --------->ANAC58              ---------->DOF2  <---------ALFIN1  <------ZmHOX2a(2) ->DEAR3(1)   <---------ANAC46----------->HVH21   =============================bZIP_DOF   --------->MYB46(3)   ttcctccgagcgtgctcagtgtaagtaacggcgtcacggataacattttccaaaaagatcttgagaacgccacgtgtctcctcgtagatcaaaccactaa  17031200                                                                                     --------->ALFIN1                                                                                     <---------MYB52(1)                                                                                   <---------ANAC58                                         <---------ZAT14                           <---------ANAC46                                         --------->ZAT14                           <---------ANAC58                                        <----------DOF2                         ----------->TGA1                                      <---------DEAR3(2)                        ----------->HVH21                                     <---------TOE1(2)                        ------>ZmHOX2a(1)                                     <---------TOE2(2)                     ------>MYB46(1)            --------->AtMYB61   <---------ARR14(2)                         ------>MYB83         --------->AtMYB61      --------->ARR14(2)                      --------->HSFC1(2)         <---------ALFIN1      <---------GLK1(2)                        <---------HSFC1(2)       <---      --------->ZAT6    <---------ARR14(2)         <---------ANAC58     <---------HSFB2a(1)     <----      --------->ANAC46  --------->ARR14(2)         <---------ANAC46     --------->HSFB2a(1)  <-------    <-----------GT1--------->ANAC46 <---------LBD16<---------ANAC58   <---------GLK1(2)  <xxxxxxxxxxx   tacgtttaacaccacctctacgagccaatctccgaatcgccggtttagtgattccttggatgttgtctctcagaaccttcctatgacgtttggctccacc  17031300                   <----------DOF2                                                                 <-                  <---------DAG2<<<<<<<GRF7                                                 <--------        --------->TOE2(3)--------->ANAC58                                                   <--------     <---------ALFIN1    --------->ANAC46     --------->ARR14(2)                      <---------AHL20(2) -------DOF2   ------>NtERF2----------->RAV1(2)                --------->HSFB2a(2)    --------->AHL20(2) -----DAG2   <---------ANAC58 ----------->HVH21  --------->TOE2(3)   <----------DOF2 --------->AHL20(2) --ALFIN1    <---------ANAC58<---------MYB59  <---------ARR14(2)     <---------DAG2--------->ARR11(3) xxxxxxxxxxsmallRNA(i2)  --------->ANAC58---------->DOF2     <---------LBD16       <---------ARR11(3)   tttgcccaaacctttgcctccctttccacgacctgacattttctaaaggaacctgaatttttcttcggaaacttttcgatttgaagatttaattgagatt  17031400                                                                                       ----------->HVH21             *TSS                                                      <---------At4g35610           --------->ARR11(3)                      ------>ZmHOX2a(2)<---------MYB52(1)------>ZmHOX2a(2)           <---------ARR14(2)                      <---------MYB59 <-----------HVH21 <------ZmHOX2a(2)           --------->GLK1(2)           <-----------GT1   --------->ATHB12           <---------ARR11(3)           <-----------ARR10       <---------AHL20(2)  <---------WOX13(1)           <---------AGP1<--  --------->ATHB12      <------ZmHOX2a(1)        <---------AGP1  --------->MYB46(3) --------->AGP1--- --------At4g35610      ==================================HOX2a_HOX2a<-----------RAV1(2)--------->MYB52(1) -TOE2(3)  --------->ARR14(2)      --------->AHL20(2) <------------CBF --------->At4g35610 <---------MYB46(3) -YAB1    <---------GLK1(2)      <-----------TBP ------->TEIL    --------->DEAR3(2) --------->ARR11(3)   gagatgatttgagaatcttgttaagaggagatgtcatttatatacaagatggatctaattgatttgaaccgtcagatgtgtttttagatctaacggttgc  17031500         --------->LBD16                                                           <---------ANAC58        <---------ANAC46                                                           ----------------->AGL1       ------>ZmHOX2a(2)                                                           <---------ANAC46       <---------LBD16                                                             <---------ANAC58      <------ZmHOX2a(2)                            <-----------GT1            ----------->HVH21     <---------ARR14(2)                     <---------AHL20(2)               --------->LBD16     --------->ARR14(2)               <---------MYB52(1)                     <-----------HVH21    ------->GAMYB            <---------ICU4 --------->AHL20(2)             <---------LBD16 <---------DOF5.7(2)        --------->ICU4 --------->AHL20(2)           <------ZmHOX2a(2) --------->MYB52(1)        <---------ANAC55(2)   <---------AHL20(2)    --------->ARR14(2) -------At4g35610          --------->ANAC55(2)  --------->AHL20(2)     <---------ARR14(2) ------>At4g35610   --------->YAB1  <---------MYB46(3)        <---------YAB1--------->ANAC46 --------   agataacgatccgggtgaacaatgagattacttattagccgttgatttaattttatcgacgcttaatattgtcgatccccgtgatgcctgtaagtgaaag  17031600                                                                               <---------YAB1                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                <------ZmHOX2a(1)                 --------->ANAC58                       --------->ANAC58                           --------->ANAC58                       --------->ANAC58                          <---------TOE2(3)                      ------>NtERF2                           <---------MYB52(2)--------->YAB1                      <---------LBD16                      <---------MYB52(1)--------->YAB1                     <---------ALFIN1                     --------->At5g28300<---------ICU4  --------->YAB1     --------->DEAR3(1)       <---------GLK1(2) --------->MYB52(1) <---------YAB1   --------->ANAC46      <----------ID1 <---------At5g28300  <---------ATHB12     ---- -->DOF2      ---------->DOF2 <---------TOE2(3)       <-----------GT1   --------->AHL20(2)  ---------   tttatgaaaatttcaaataagcgccacggattgaggaatatagcgccaaattcttttcaccgttactaacgaaattaaatcatcatagaacaaaaaaaat  17031700                                 --------->AHL20(1)                                 <---------AHL20(1)                                <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                            --------->AHL20(2)                            <---------AHL20(2)                          --------->AHL20(2)                          <---------AHL20(2)                        --------->AHL20(2)                        <---------AHL20(2)                                                      xxxxx                      --------->AHL20(2)                                  --------->AHL20(2)   ------                      <---------AHL20(2)              --------->YAB1 --------->AHL20(2)        <-----                    <---------AHL20(2)               <-------TEIL  --------->ANAC58 --------->ATHB51                    --------->AHL20(2)            --------->ICU4   ----------->GT1  <---------AHL20(2)   <-----------GT1--------->AHL20(2)         ----------->GT1       --------->ANAC58 <---------ICU4 ------->GT1      <---------AHL20(2)        ----------->GT1    --------->ZAT6       --------->AHL20(2) >AHL20(2)      --------->AHL20(2)       --------->MYB52(1)  <-----------GT1       <---------AHL20(2)   cgttataacatttcacatatatatatatatatatatatattacgaacgggtaatattcatatttaacacaagtaaataaaacaaaattatttcacaatgg  17031800                                                                        <---------ANAC58                                                                  <-----------GT1                                                               ------->TEIL                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                            --------->ANAC58                                                            --------->ANAC46                                                        <------ZmHOX2a(2)                                                        --------->CCA1(2)                                                       --------->AGP1   <---------ANAC58                                        <-----------HVH21   --------->ANAC58                                 <------MYB83          --------->ARR14(2)            --------->DAG2      <---------AtMYB61      <---------ARR11(3) xxxxxxxxxxxxxxxxxx>smallRNA(si3)<------MYB46(1)       <---------ARR14(2)                         --- ----->GT1 ---------->DOF2 --------->DAG2              --------->ARR11(3)           <-----------HVH21 ----MYB46(3)----------->GT1    --------->MYB59      ----------->ARR10--------->ARR11(3)--------->ANAC46   ttaactaataacataaagttatacatcgaaaggtttggtttatgtcacattagagaagatccacgtatatactatcttgccttaggcttcacatcagtat  17031900  Previous    Next  AGI:  At3g46320.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G53730.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 17030896    to: 17031413    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46330.1    Description:  MEE39 (maternal effect embryo arrest 39); kinase. similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46340.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45750.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro Range:  from: 17031732    to: 17035996    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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