Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------AHL20(2)             --------->AHL20(2)          <XXXXXXXXXXXXXXXXXXXMIR172B*     <------MYB83     <------MYB46(1)          --------->MYB46(3)    --------->MYB111(1)      ------>MYB83   <---------MYB55(1)        ------>MYB46(1) -------->ZAT6              ----------->RAV1(1)                --------->AHL20(2) <-----------GT1 -------->RAV1(1)         --------->MYB46(3)            <----------ID1   <----------DOF2     <-------   caacagtaggtgtattttaatggttctgaccaacatccgagtagtttttttgttaattgagacaaaaaaatcgttctttcaattctacaatactcgttat  16989700                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                   --------->ANAC58                     <---------TOE2(3)        <---                                   --------->ANAC58              ------>MYB46(1)                <----                                   --------->ANAC46              ------>MYB83                 -------                             <------ZmHOX2a(1)                 --------->TOE2(3)              <------       ---------->DOF2      <----------ID1                   ------->TEIL <------ZmHOX2a(1)   ------- --MYB52(1)              ---------->DOF2        --------->AGP1 <---------MYB59      --------->At4g35610   ctagcacataaaagacgatgtatgaacaaaaggacacacgaatcaacacagagctagactaagaacctaattttgaggaagctagaagcagagacgattc  16989800                                           --------->ARR14(2)                                           <---------ARR14(2)                                        --------->ANAC46 ------>LBD16                           <---------ANAC55(2) ----->ANAC55(2)                        --------->ANAC55(2) ------ANAC46                           --------->ANAC58 ------ANAC58                           --------->ANAC58 ------ANAC58                          <---------LBD16                  ----------->RAV1(1) ------ANAC55(1)             <---------ARR14(2)                         --------->MYB52(1) ------ANAC55(2)             --------->ARR14(2) ---------->DOF2        --------->AtMYB61 -------------------TaNAC69(2)      <---------ZAT2 <---------ZAT2------->GAMYB*TSS -->ARR14(2)        ---------->DOF2 <---------At4g35610        --------->At4g35610 ---ARR14(2)     <---------TOE2(3)  --------->At4g35610      --------->MYB46(3)<------ZmHOX2a(1)   <- -->GLK1(2)     --------->MYB52(1)  --------->ZAT2 --------->At4g35610--------->MYB46(3)           <-   cgtatcaaacaagaagactaacgaaagagagaatacacagctacggaactgaaagctggaagaacaactgaaaccaccagaggagagaaactcgaagaat  16989900                                                                      <---------ARR14(2)    ---------                                                                      --------->ARR14(2)   <---------                                           <---------ARR14(2)         <---------MYB52(1)   --------->TOE2(3)                                           --------->ZAT14           <---------MYB52(1)    --------->TOE1(3)                                           <---------ZAT14          ----------->GT1        ==========                                           --------->ARR14(2)       --------->LBD16        <---------                                  --------->WOX13(1)              <---------LBD16       <-----------GT1                                <---------ATHB12           ----------->GT1      <------------CBF --------TOE2(3)                ------------>CBF        --------->MYB52(1)     --------->ATHB12 --------TOE1(3)     ------------>CBF--------->YAB1    --------->MYB52(1)    <<<<<<<<<<<<<<<<<LFY   tagggtttatttgtttcaaaaccctcaatttcaaatcaattagagtataccgaaaacaaaccggttaatccggttattcaaacattggtttaactttaac  16990000                      --------->ANAC55(2)                                              --------->ARR14(2)                   --------->ARR11(3)                                                  <---------ARR14(2)     ------------>CBF <---------ANAC55(2)                                              --------->GLK1(2)     --------------->AGL15                                  *TSS               <---------ANAC46 <---------ZAT18   <---------ARR11(3)                  --------->LBD16       --------->MYB52(1)   --- <---------ZAT14   <---------GLK1(2)                  <---------ANAC46      ------->GAMYB ----------- --------->ZAT14 ----------->ARR10             --------->WOX13(1)           ----------->HVH21-------- >DOF5.7(2)   <------ZmHOX2a(1)              ------------>CBF  --------->GLK1(2)----------->GT1 ----- ------AGL15<---------TOE2(3)           --------->YAB1--------->HSFB2a(2)   ----------->TGA1 -------- ====================MADS_MADS   <---------MYB46(3)   <---------HSFB2a(2)  <---------MYB52(2)-------- -DOF2  <------------CBF        --------->ALFIN1     <---------LBD16<---------ANAC46  --------->RVE1(1)   cagtaaactcaattgaggaaagatacttaatacggtgtttgaacataatcaatcttccggagaagaatttgtgtataactgacggaaaaaatccgacgca  16990100                                  --------->LBD16 ------>DEAR3(1)                <---------LBD16                                                  ---- >HVH21                       --------->GLK1(2)                                                <----- ->ANAC58                <-------TEIL                                                          ------ -->TEIL          ------>ZmHOX2a(2)                                                <-----------HVH21 ->ANAC58        --------->At4g35610                           <---------YAB1      <-----------TGA1 ->ANAC46        <---------At4g35610               <------ZmHOX2a(1)--------->ATHB12  <---------DEAR3(2)   tcgacgatatcaaattttgatctgagattcaaattccggtgataacgcgaagaggaagatggatgatgaattgttggaattgcagcgtcagttcgagttc  16990200                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                         ---------->ID1                                                                     <---------ANAC58                                                                     <---------ANAC58                                <------ZmHOX2a(2)                   --------->ZAT2                               <---------ARR14(2)                 <------ZmHOX2a(1)                 -     --------->At4g35610     <---------DEAR3(2)                   ===============================HOX2a_HOX2a   <-----------RAV1(2)      --------->ETT(1)                   <-----------RAV1(2)          --------- ----->At4g35610 <---------ANAC58     <-----------RAV1(1)  <---------HSFC1(2)           <---------ARR14(2) ----ZAT18       <---------ANAC58------>ZmHOX2a(2)         --------->HSFC1(2)           --------->ARR14(2) --->ZAT18  --------->WRKY18(1)--------->ARR14(2)       <---------At4g35610<----------DOF2------>ZmHOX2a(2)   gctcaacaggtgaagtcaagcgtgagattgtcggatcgaaatgttgtcgaattggttcagaagcttcaggagcttggcgttattgacttcgatctgcttc  16990300                                                     --------->ALFIN1        --------->LBD16                              <---------ANAC46      <---------LBD16                              --------->LBD16      --------->At4g35610                        <---------LBD16               <---------YAB1   ----------->HVH21                        <---------ANAC58                 --------->YAB1  <-----------TGA1                          <---------ANAC58         --------->LBD16  <-----------HVH21--------->ANAC46<---------GLK1(2)<---------MYB52(1)       <---------ICU4 ---------------->AGL1           --------->ICU4<---------ARR14(2)   <---------HSFB2a(2)           <-- >At4g35610---------->DOF2<-----------RAV1(2)  --------->ARR14(2)   --------->HSFB2a(2)   <---------ANAC46   ataccgtcaccggaaaagaatacatcactcaggtactgattctatttcgtttccggtgtgaatttagactccagaagaatcatcactgggtttcgcatag  16990400                                                                        <---------AHL20(2)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                             <---------ANAC58                                   ----------->GT1           <---------ANAC46          --------->ICU4         ----------->GT1             <---------ANAC58          <---------YAB1         <---------ANAC58            <---------AtLEC2        --------->YAB1           <---------ANAC58       <-----------RAV1(1)  ----------->GT1 -------GLK1(1)                  <---------ANAC46--------->ZAT6    <------ZmHOX2a(1)   aattctggtatcatgatgtgagtaatgtgttaatggagtgaaaaattgctaactcttcttgttgcatgaggaatttaatcggaaaaaatgaagttaagtt  16990500                                                                  --------->ALFIN1           --------                                                                <---------bZIP60(2)        <-------TEIL                                                                <---------ANAC46          --------->ARR14(1)                                                                <---------TGA1a           --------->CCA1(2)                                                                <---------ANAC58         --------->ARR11(1)                                                                =====================================                                                                =====================================                   <------ZmHOX2a(1)                            <---------ANAC55(2)      --------->ARR14(2)                <---------LBD16                                 --------->ANAC55(2)      <---------ARR14(2)                <-----------RAV1(2)                             <---------ANAC58        <---------At4g35610       --------->ATHB12                                         --------->TGA1a         --------->At4g35610    ------>ZmHOX2a(2)         ===========================HOX2a_HOX2a              ------>ZmHOX2a(2)    =================================HOX2a_HOX2a                <---------O2     <---------At4g35610    ======================HOX2a_HOX2a       <-----------HVH21   --------->O2    --------->ARR11(3)  <  <---------ARR11(3)          <------ZmHOX2a(1)     ----------->GT1             <---------AGP1    <--  --------->ARR11(3)        <---------TOE2(3)     <------ZmHOX2a(2)       <---------MYB52(1)<--------   gtttgatcttgatttgtttcaggagcaattgaggaatgaaattactcgtgagatcagtaaattgggacgtgtctctgttattgatctggcagatacgatt  16990600  Previous    Next  AGI:  At3g46210.1    Description:  3' exoribonuclease family domain 1-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G07110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44027.1); contains InterPro domain Exoribonuclease, phosphorolytic domain 1; (InterPro:IPR001247) Range:  from: 16987725    to: 16989878    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46220.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21736.1) Range:  from: 16990060    to: 16995162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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