Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------ZmHOX2a(1)                             <---------TOE1(3)                       --------->ICU4 --------->REM1(1)   --------->ATHB51                             <---------HSFB2a(2) ------DEAR3(2)      <---------ICU4                --------->ANAC58 ---MYB46(1)      --------->TOE2(3)                --------->AtLEC2            <---------YAB1 ---MYB83         --------->TOE1(3)                --------->ANAC46  ----------->GT1 -----TOE1(2)     --------->YAB1          <-----------GT1         --------->HSFB2a(2) -GAMYB  <---------WRKY38(1) <---------TOE2(3)     --------->ANAC58  <---------ZAT6   ggtacaactagtcaacaaaaccataatttttaaggaattgtttttctcaatacatgcaacgttttcttctagagtgaattcattatcgacttggaagatt  16979900                             --------->YAB1                             <---------ICU4                    --------->ARR14(2)--------->WRKY12                                --------->ANAC58                    ------->TEIL    <---------At4g35610                       ---------->DOF2                    <---------ARR14(2)----------->HVH21                 <-------GAMYB --------->ANAC58       --------->YAB1     --------->YAB1        <---------AtLEC2 --------->MYB52(1) ---------->DOF2     ------->TEIL  <---------CCA1(2)--------->At4g35610<---------YAB1  --------->ALFIN1   gaacatgtatcatcaagagttgtatctgtaatcatatcagttgacagtttgaatggtcttattgaactaaggggtgttaacaaagccaaagcaagtagat  16980000                       ----------->GT1                      --------->CCA1(2)                   <---------YAB1                                             ---------->DOF2       -                   <---------TOE2(3)                        <----------DOF2----------->GT1         <-        <---------ATHB12     --------->AHL20(2)     --------->AtLEC2  ---------->DOF2 <------ZmHOX2a(1)   ttatgctccaatgagcttattaagatagaaataaactagggacttgaatagctcatgcagagctttattgtgcaaagaagtaaagagaggaagaacaact  16980100                             <---------AHL20(2)                       --------->AHL20(2)                 <-----------------AGL1                --------->WRKY45                    <---------MYB52(1)         ---------->DOF2    --------->AHL20(2) ------>NtERF2 -------->YAB1  --------->WRKY38(1)            ---------->ID1                       <-----------GT1 --------YAB1   --------->WRKY12        <---------TOE1(3)<---------ZAT18   ----------->GT1   tatcaaaagattaaagcgttgacaaaaatataaaatagatttaagcttcggcccattagttcccttcttgggattaatggtttatttatcggcccattta  16980200                                                                                                <----                                                                                         --------->ARR14(2)             --------->YAB1                                                              ------->TEIL        <-----------------AGL3            <----------DOF2                                <---------ARR14(2)        ----------------->AGL2         <-----------GT1                              --------->CCA1(2)        ----------------->AGL3      <---------AHL20(2)                     --------->MYB52(1)------>ZmHOX2a(1)      <---------At4g35610  ------>ZmHOX2a(1)       *TSS        <---------AtLEC2--------->At4g35610  <   gtgatttcagcccattaatggtttcattcctctctcatttttttctttctgtgttcgagcttcttccatggcgaaactagcagaagagatgaatcctgaa  16980300           <---------ZAT2                                                                        ----           --------->ZAT2                                                                       <----   --------->ANAC58                                                                         ------>ZmHOX2a(1)   --------->ANAC46                              <---------TOE1(2) ------->TEIL            --------->TOE1(3)   --------->ANAC58                         <-----------HVH21      <---------ARR11(1)      --------->TOE2(3) -----TOE1(3)                 ----------->RAV1(2)<---------TOE2(2)<---------ARR14(1)    --------->ARR14(2) -------TEIL<---------GLK1(2)------>ZmHOX2a(1)  <-----------RAV1(2)--------->GLK1(2)    <---------ARR14(2)   ggttcacgataccagcttcttctctcatgtccttctggcctctctccgtctcaggtttctctccaatcgaatctatacaatgtgacttagtatccttaat  16980400                                                                                           --------->GLK1(2)                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(2)                                                                                          <---------GLK1(2)                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <---------ARR11(3)                                                                           <---------GLK1(2)                                                                           <---------ARR14(3)                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                           --------->ARR14(3)                                                                           --------->ARR11(3)                                                                   =================HOX2a_HOX2a                                                                   ------>ZmHOX2a(1)     --------->HSFC1(2)                                                                   ================HOX2a_HOX2a                                                              --------->ARR14(2)         <---------HSFB2a(1)                                                           ------>ZmHOX2a(2)--------->GLK1(2)                                            --------->HSFC1(1)<---------ARR14(2)    <---------HSFB2a(2)                                            <---------HSFC1(1)<---------GLK1(2)------>ZmHOX2a(1)                                            <---------HSFB2a(2)--------->GLK1(1)    --------->HSFB2a(2)                                        --------->GLK1(1)  ===========================HOX2a_HOX2a                             <---------ARR11(3)         --------->ATHB12   --------->AGP1<---------HSFC1(2)                             --------->ARR11(3)       <---------TOE1(2)  ----------->ARR10<---------ARR14(2) ----->YAB1              ---------->DOF2<---------GLK1(1)  ===============HOX2a_HOX2a    --------->HSFB2a(1) -----ATHB12         <---------------AGL15  --------->HSFB2a(2)<---------GLK1(1)    <---------HSFC1(1)   catccgatattgttgtttcgatgctaaaaaaggtctcagtggatttctcgaaatcgcatgatcggattcctcgtcaagatcctggtctagaagattctat  16980500                                        <---------YAB1                                      <---------ICU4                                      --------->YAB1                                       <-------TEIL                                      <--------ATHB1                                     <---------ARR11(3)                                     <---------ATHB51                                    <---------ARR14(2)                                     <---------ATHB12                                    --------->ARR11(3)       ----------->ARR10   --------->HSFB2a(2)                                           --------->ARR14(2)   --------->ZAT2          <---------HSFB2a(2)                                          --------->GLK1(1)   <---------TGA1a      <---------ARR14(2)         ------>ZmHOX2a(2)             <---------ATHB12   --------->TGA1a      --------->ARR11(3)  <---------MYB46(3)                   ----------->TGA1   <---------ZAT2       --------->GLK1(2) <---------ANAC58                  --------->YAB1<------ZmHOX2a(2) <-----------RAV1(2)    --------->ARR14(2)<---------ANAC58----------->GT1   --------->TOE2(3)   ttcacaggtgagaaccgaaaatggagtatctagaattcaataatgcttgttgatcgaaatttgaaaaaaaaaactcaatctcaatgacgaagatccattt  16980600                                                                        <---------ICU4                                                                        --------->ATHB12                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                 --------->At4g35610   <---------YAB1                                                 <---------At4g35610 --------->YAB1                           <----------DOF2       --------->ZAT2     <-------TEIL               <---------TOE1(3)       --------->MYB59--------->GLK1(1)--------->ICU4               --------->MYB59         <---------TOE2(3)<------ZmHOX2a(2)               <---------TOE2(3)       <---------TOE1(3)----------->HVH21        <---------ATHB12  <---------YAB1         <---------ZAT2  --------->GLK1(1)              <----   cgaaactctaatcaatttaggtttgattacttttgaaaatttaggtttgggagcagagatcacagggaaattcatcattgttcaatggccaaaaatttag  16980700                         <-------TEIL                    ------>MYB46(1)                                                         ---------                    --------->MYB52(1)                                       --------->ARR14(2)                   --------->MYB55(1)                                        <---------ARR11(3)   <--                  <---------MYB59                                            <---------ARR14(2)------                  <---------MYB46(2)                                         --------->ARR11(3)<-----    ------->TEIL  --------->MYB46(3)                                        <------ZmHOX2a(1)--------   <---------CCA1(2)------>MYB83            --------->At4g35610           <---------ANAC46  <-------- -----TOE2(3)  <-----------GT1   <---------YAB1                 <-----------GT1        <---------At4g35610   ggtatgtatctattgttttaccaaacgttcatgttatgtttcgataagcttactcttagttaaaattttcagtatggaggatattgtttagatgatgatg  16980800  Previous    Next  AGI:  At3g46200.1    Description:  ATNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9); hydrolase. Identical to Nudix hydrolase 9 (NUDT9) [Arabidopsis Thaliana] (GB:Q8VYR2;GB:Q8GXK4;GB:Q9LX75); similar to unnamed protein product [Vitis vinifera] (GB:CAO21734.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 16980251    to: 16982189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version