Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->AHL20(2)              <---------AHL20(2)      --------->YAB1                                                                <---------MYB46(3) -------->LBD16                                                                    <---------WOX13(1) -------->At5g28300                                                             <---------YAB1 --------ANAC58                                                        --------->ANAC58           --- --------ANAC58                                                        --------->ANAC58          ---- --------ANAC46              ------>ZmHOX2a(1)                         --------->ANAC46         -----   gccgtgaatgatcaaattatatgaacacatcctattaatcttcgagtcatttttctgaaatggaccaatttgtaagcaagttgtgattgttagtagaaaa  16976500                                                             --------->YAB1                                                        <-----------GT1                                                       <<<<<<<<<<GT-3b                             --                                              --------->AHL20(2)                               ------                            <---------ARR14(2)<---------AHL20(1)                               <-----   <---------MYB52(2)       --------->ARR14(2)<---------AHL20(2)<---------ICU4         <---------At4g35610 -------->GT1      <---------YAB1  <----------DOF2 --------->AHL20(2)                 --------->GLK1(2) ----->DAG2  <---------ATHB12      <---------DAG2  <---------AHL20(2)                <---------GLK1(2) ----->DOF2--------->WOX13(1)   <-----------GT1   <---------AHL20(2)<-----------GT1 <------ZmHOX2a(1)   aagtaactaatgtcaatgactcttattgagtatttgactttttcttattttatttatttttcttcataattttccatttgaatacaggaatctgatatat  16976600                                                                                                   --         ---------->DOF2                                                                           <-      --------->ANAC46                                                                            <--      <---------ANAC55(2)                                                                       <----      --------->ANAC58                                                                          -----      --------->ANAC58                                                                         ------     <-------TEIL                                                                              <-----    --------->CCA1(2)                                                                        <-------   <---------SPL7                                                                           <--------   --------->ARR14(2)                                                                       ---------   <---------ARR14(2)                                                                    ------>MYB46(1)  --------->HSFB2a(1)                                                                    ------>MYB83  <---------HSFC1(2)                  <------------CBF                                  ----------->RAV1(1)  --------->HSFC1(2)       <------------CBF                                            --------->AtMYB61  <---------HSFB2a(1)   ------------>CBF                         <----------DOF2    --------->REM1(1) ------->LBD16         ----------->RAV1(1)                    <-----------GT1       --------->ANAC46 --->ARR14(2)         --------->REM1(1)                 --------->AHL20(2)         --------->ZAT14--- ----ARR14(2)<------ZmHOX2a(1)      --------->ICU4      <---------AHL20(2) ---------->DOF2 --------->TOE2(3)   ccgaaggtacgcaaaggatgaactacaacaattgtgtcaaaattgaaaactatatcatataatttttctttcttcataaaagctctacaccaacattatt  16976700     --------->AHL20(2)    <---------YAB1  --------->YAB1  <---------ICU4                                                               <------ZmHOX2a(2) --------->ICU4                                                         <---------AHL20(2) <---------YAB1                                                       <---------AHL20(2) ------->YAB1                                                      --------->AHL20(2) --------ICU4              <---------YAB1                          <---------AHL20(1) -------YAB1              <------------CBF                         --------->AHL20(1) -----ICU4               --------->ATHB51                          <---------AHL20(2) ---->YAB1               --------->ATHB12                          <---------ARR11(3) --->ICU4                <---------ICU4                       <---------YAB1  --------->ARR11(3) ----YAB1                -------->ATHB1                    --------->ICU4     <---------ARR11(3) --ICU4                 <---------YAB1         --------->TOE2(3)   --------->ARR11(3) -YAB1                <---------ICU4         <---------ARR11(3) <---------AHL20(2)              ----- >ICU4   <-----------GT1--------->ICU4       --------->ARR11(3) --------->AHL20(2) --------->YAB1---- ------>ICU4       --------->YAB1   --------->ARR14(2)  <-------TEIL<---------AHL20(2)          -----   attattattatttacaaaaaataagaattattgttccaaatattcgaaatcttagacatacattattaatatattttttagatcatcaaaatgttcaaac  16976800                         --------->TOE2(3)                       <-----------GT1                    <---------ICU4                    <---------AHL20(2)                    --------->AHL20(2)                <---------AHL20(2)             <----------DOF2                      --------->YAB1            <---------ANAC58               --------->HSFB2a(2)                                      - ---->ANAC58<---------ANAC46               <---------HSFB2a(2)                          ---------->DOF2 ----->TOE2(3)  --------->AHL20(2) <---------ANAC58                                   --------->AHL20(2) ---->ANAC58<---------ANAC58       <---------ANAC58                                   <---------AHL20(2)   gtaaacataccatggcttttaattttttcttaatatttcttgctactagaaataataagttgatatatcaaaaatgtctaaatacgaattaaaagtaact  16976900                                                                                  --------->TGA1a                                                                                  <---------TGA1a                                                                         <---------At5g28300                                                                   <---------MYB111(2)                                                              ------>ZmHOX2a(1)   ===================     <-----------HVH21                                   --------->HSFB2a(1)  <-----------HVH21    ----------->GT1    --------->At4g35610 --------->YAB1<---------HSFB2a(1)  <-----------TGA1 --------->DOF2  --------->ANAC46         ----------------->AGL1   --------->MYB46(3)       <--------   tctaaagggtcacaaaaacacgagaagctcaagaccgctcttctaccatattggagagaacgtcctccaacaacttacagcgtcacgttcgagtcttttg  16977000                               <---------ANAC55(2)    -------->HAHB4             --------->ANAC55(2)  --------->ETT(2)               <---------DOF5.7(2)    --------->ATHB12           <---------ANAC58     <---------ETT(2)            --------->TOE2(3)   --------->ICU4              <---------ANAC58   <-----------HVH21             --------->TOE1(3) ==bZIP_DOF      <<<<<<<<<<<<<<<<<LFY      <----------DOF2           <-------TEIL--------->DOF5.7(2)- --DOF2      ----------->GT1 <-----------GT1   <---------At5g28300   --------->SPL7---------->DOF2---   ggaaaatgatggagctagtaaacaatggatattacgagtcccttcctttcactgtcgatggaatcaactggtacgtcgttttcgttaaagaccattacaa  16977100                                                                                                 <---                                                                                                 ----                                                                                               ------                                                             <---------TOE2(3)           --------->TOE1(3)                                                             <---------TOE1(3)           --------->TOE2(3)             ------>MYB83                                   --------->MYB52(1)     --------->ARR11(3)             ------>MYB46(1)                                <-----------GT1        --------->GLK1(2)           <---------MYB59                             --------->AHL20(2)          <---------ARR11(3)        <-----------GT1                  <---------MYB52(1) <---------DOF5.7(2)    <-----------ARR10 <---------AHL20(2)                 <-----------GT1    <---------AHL20(2)     <-------TEIL   >>>>>>>> -------->AHL20(2)               --------->YAB1     --------->TOE2(3)    <------ZmHOX2a(1)  --------- ------>TOE2(3)              <---------YAB1    <----------DOF2       ---------->DOF2   -------->P<---   cattaatttgttacctagcttatatatgtttctaattgtaacccttattctttttcttaaattaacgttttaaaaggacgttcaaaatctaccctaacgg  16977200                                                                  ----------->RAV1(1)                                                                  ------>MYB83                                                                  ------>MYB46(1)                                                                 --------->ANAC46                                                                 <---------ALFIN1                                                                --------->MYB46(3)                                                                <---------MYB55(2)                                                              ------>MYB46(1)                                                              ------>MYB83                                                             --------->ORA47(1)                                                            --------->DEAR4(1)                                                            <---------MYB46(2)     --------->SPL7                                         <---------MYB55(2)                ------- ------GLK1(2)                                              --------->DEAR3(1)                <------ ----->ARR14(2)                                             --------->MYB46(3)           <------ZmHOX2a(2) ->GAMYB                         ----------->GT1           --------->DEAR3(2)           --------->ARR11(3) >MYB98  --------->AtMYB61   <----------DOF2          --------->YAB1                   --------->GLK1(1) >MYB52(1)                <-----------GT1           --------->ANAC58                --------->LBD16 ------ARR14(2)  <------ZmHOX2a(1)    --------->ICU4--------->ANAC58              <---------LBD16   aaactcggacaccacaagaggacttatttatctttatgtaaaaattgatgactcaagcatcaccgacccaccattagatgtgtatgcggagatcaagttc  16977300                                                                        --------->ANAC55(2)                                                                        <---------ANAC55(2)                                                                --------->ATHB12     --------->REM1(1)                                         <-------TEIL                       --- -->ARR11(3)              <---------YAB1                  <---------WOX13(1)                     <--- ---ARR11(3)   <----------DOF2            <-------TEIL  <------ZmHOX2a(1)              ------->TEIL   ttcgtctacaactatggcattagcgagtattatacataccaaggtacttcaacttagaggattgattcattggtatgtaatgtaagacgaatgtgtattt  16977400  Previous    Next  AGI:  At3g46190.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to ZW9 [Arabidopsis thaliana] (TAIR:AT1G58270.1); similar to unknown [Populus trichocarpa] (GB:ABK94833.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain TRAF-type (InterPro:IPR013322) Range:  from: 16976874    to: 16978330    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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