Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                          <xxxxxxxxxx                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                --------->ZAT6           <xxxxxxxxxxx                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                              <-----------GT1        <------ZmHOX2a(2)                                                             --------->YAB1          ================                                                            <---------YAB1  --------->ATHB12<--------                                                         <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <xx                                                   --------->ZAT14    --------->YAB1<xxxxxxxxxxxxxxxx                                                   <---------ZAT14    --------->AtMYB61<xxxxxxxxxxxxx       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)         <---------ZAT18  xxxxxxxxxxxxxxxx>smallRNA(i)  <xx  --------->ARR11(3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------YAB1xxxxxxxxxxxx --------->YAB1                  <------ZmHOX2a(1) --------->ZAT18xxxxxxxxxxxxxxxx>smallRNA(i) <----- ------->DOF2                   <----------ID1  ---------->DOF2<---------YAB1 <xxxxxxxxxxxxxxxxsmallRNA(i) ----->GT1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxx -AtLEC2  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ARR14(2) --------------TaNAC69(2)--------->GLK1(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxx   taaagataaccagatgtgtaattgaagtatctataggacgaagttgtcgctagagcactcttattatcactaccatcactattggcgatccaatatgtaa  16950400                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  --------->AHL20(2)              ------>ZmHOX2a(1)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             --------->TOE2(3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        --------->MYB46(3)        --------->HSFB2a(1)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <---------HSFB2a(1)        <---------HSFC1(2)                 xxxxxxxxxxxxxxxx>smallRNA(i)        --------->HSFC1(2)                 --------->YAB1      <-----------GT1             --------->ANAC46     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------YAB1 >ANAC55(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <---------ANAC55(2) xxxxxxxxxxxxxsmallRNA(fl3)       --------->O2                             <---------ANAC46 xxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   <---------MYB52(1) ====================HOX2a_HOX2a<xxxxxxxxxxxxxxxxsmallRNA(i)           <----------DOF2 -ANAC55(2)------>MYB46(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC58                    <---------ANAC46 xxxxxxsmallRNA(i2)<---------AHL20(2)    --------->ARR11(3)           <---------ANAC58 xxxxxxxxxxsmallRNA(le3)       --------->TOE1(2)              --------->GLK1(1) xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC58            <---------GLK1(1)   --------->TOE2(2) xxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ANAC58    --------->ICU4 ------GT1 ------>MYB83   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------>ZmHOX2a(2)  --------->TOE1(2) xxxxxxxxsmallRNA(i2)    <---------ZAT6  <---------ARR11(3)  <---------ARR11(3)  ----------->RAV1(2)x xxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->ARR11(3) ------->TEIL<--------   cgacgttagaaccatcctcatttaatggtgttacccacgagatgatcatacctcgaccagcgtgatctccttgcgttatgtgaacctgagaaataagtaa  16950500                                                                                             xxxxxxxx                                                                                           ----------                                                                                          xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                     <-----------RAV1(2)                                                                                     <---------LBD16                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               <---------ANAC55(1)                                                                               --------->ANAC55(2)                          ---------->DOF2        ----------->GT1               <---------ANAC58                        <---------ANAC46    --------->AHL20(2)                 <---------ANAC58                     --------->ALFIN1     <---------ANAC55(2)                  <---------ANAC46                    <xxxxxxxxxxxxxxxxsmallRNA(i) --------->YAB1                <---------ANAC55(2)                --------->TOE2(2)--------->AHL20(2)                          <-----------GT1<-------GAMYB      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)----------->GT1                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  ---------->DOF2------>ZmHOX2a(1)--------->AHL20(2)        ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->AHL20(2)<---------AHL20(2)<---------ICU4<------ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------AHL20(2)<---------AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(i) -ANAC55(2)     --------->TOE2(3)<---------AHL20(2)    --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   gagtaaaagcctataaatcctaagtggcgaaagaaataaataatatgtaaatagtaattttataaagagaaattgagaattacttgttcaggagcgttat  16950600                                                --------->ARR14(2)                                                <---------ARR14(2)                                                <---------GLK1(2)                                         --------->HSFC1(2)                                         <---------HSFC1(2)                                         <---------HSFB2a(1)                                         --------->HSFB2a(1)                                         <---------MYB46(3)                                    <-----------RAV1(2)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------MYB52(1)                     <----------ID1         ----------->GT1        xxxxxxxxxxxxxxxx>smallRNA(i)                           <xxxxxxxxxxxxx       --------->ALFIN1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <---------DOF5.7(2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ARR14(2)                        --------->MYB52(1)   <-----------RAV1(2)         <---------ARR14(2)                                  <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC58              --------->ARR14(2)                                 <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC46             xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC58    <---------ANAC46   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              <---------ZAT2 ->GT1<------ZmHOX2a(1)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               --------->ZAT2---------- xxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        xxxxxxxxxxxxxxxx>smallRNA(i)  <-- xx>smallRNA(l2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          xxxxxxxxxxxxxxxx>smallRNA(i)   <-- xx>smallRNA(l2)     <---------ANAC58 <---------At4g35610  --------->ICU4 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xx>smallRNA(fl3)    <---------ANAC58<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxsmallRNA(i)   aacaagcaggagggggaaatgtttcgagtggcatttcttcagatggttccgatactcggacatgagtactggtgactccagcttggctaacgacaaagat  16950700                                                                                             --------                                                                         <------ZmHOX2a(2) <---------ICU4                                                                        --------->ARR14(2) --------->YAB1                                                                        --------->AGP1     <--------ATHB1           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         <---------AGP1     --------->AHL20(2)          <xxxxxxxxxxxxxxxxsmallRNA(i)                                  --------->ARR11(3) <---------AHL20(1)         <xxxxxxxxxxxxxxxxsmallRNA(i)                                   <---------ARR14(2)--------->ICU4        xxxxxxxxxxxxxxxx>smallRNA(i)                         --------->HSFB2a(1)        --------->YAB1       ------->GAMYB                                         <---------HSFB2a(1)       <---------AHL20(2)      --------->ANAC58                                  --------->HSFB2a(2)    <----------DOF2      --------->ANAC46                                  <---------HSFC1(1)    <---------ANAC58 xxxxxxxxxxsmallRNA(i2)         <---------ANAC55(2)     <---------HSFB2a(2)   <---------ANAC58<------ >DOF2--------->ANAC58          --------->ANAC55(2)     --------->HSFC1(1)------>ZmHOX2a(2)<---------AHL20(2) -------ANAC58             <---------ZAT6         <---------ANAC58      <---------ARR11(3)<---------YAB1 -------ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(i)       <---------ANAC58<---------YAB1 ----------->GT1 <---   gcttaacaacgcaatcgcagagcaaacaagtgttaagtgattcaatcccatttcgtttctagaaaattctaatagatcttgctttgtaaataataatttt  16950800                 <-----------TBP                <----------DOF2            <-------MYC3      <---------ARR11(3)                                                                 --------->ARR11(3)      --------->AGP1 --------->HSFB2a(2)                                                 <---------AHL20(1)      --------->ARR11(3)                                    <---------ARR11(3)           --------->AHL20(1)     --------->GLK1(1)                                      --------->ARR11(3)     ----------->GT1 ->ICU4<------ZmHOX2a(2)                                ---------->DOF2  --------->ARR11(3) ---ICU4<-------TEIL <---------HSFB2a(2)            <---------ZAT6       <---------ARR11(3)        <- --------GT1------->MYC3                          <------------CBF      --------->YAB1   <---------ARR11(3)   tactatgagatccatatgcttttatagaaaaaacaaaatgctaagtatattctattgttaaagatttattccaaagataatcagtttgaaaaatattcta  16950900                                                                                         --------->AHL20(2)                                                                       ------------>CBF  <---------AHL20(2)                               --------->YAB1               <---------GLK1(2)            --------->AHL20(1)                              --------->ICU4                --------->ARR11(3)          <---------AHL20(2)                         --------->ANAC46                   <---------ARR11(3)          --------->AHL20(2)      --------->YAB1     --------->ANAC58                 <---------TOE2(2)         <---------YAB1  -------->ATHB1         --------->ANAC58                 <---------TOE1(2)       --------->YAB1 ---- --------->ICU4  >>>>>>>>>>GATA-1              <-----------GT1   <-----------GT1 <---------YAB1<----- --------ICU4 --------->HSFB2a(2) --------->YAB1         ------>ZmHOX2a(1)<------------CBF  <--------   agaattattcatatttctcgatttcaaacgaaataatcaagagaaaatgttacagtttcctagattttctccgaacaattgttcttataattttattaat  16951000          <---------AHL20(2)         <---------AHL20(2)         --------->ARR11(3)         <---------ARR11(3)         <---------AHL20(1)         --------->AHL20(1)         --------->AHL20(2)        <-----------GT1    --------->AHL20(2)            --------->KAN4(2)                                                 -    <---------AHL20(2)           --------->KAN4(1)                                                 --   --------->YAB1                <----------TaMYB80                                              ----   --------->AHL20(2)            <---------KAN4(1)        --------->GLK1(2)                 <--------   <---------AHL20(2)           ---------->TaMYB80       <---------ARR11(3)                 -------->HAHB4 ----->YAB1           --------->TOE1(3)                  <---------GLK1(2)                 --------->ICU4 ----TOE2(3)        ------->TEIL<---------KAN4(2)      ----------->ARR10                 --------->YAB1 -YAB1  --------->AHL20(2) ---------->DOF2        ----------->HVH21                   --------->YAB1-   gctaattaaaatatatttgtcgaacctgaaaaagaatatacctcgttacactgtgacaagattctatagaaactagatgacaaatgaaacataataatgc  16951100                                                                                            <--------                                                                                       <---------ANAC58                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC58   --------->YAB1                                                                      <---------ANAC55(1)   <--------HAHB4                --------->YAB1                                        <---------ANAC55(2)   --------->ATHB12      --------->ICU4                                                <---------ANAC46   <---------ICU4      <--------HAHB4                                                 <---------TOE2(3)  <---------ATHB12     --------->YAB1                                            <---------AHL20(2) -------->WOX13(1)    <---------YAB1           --------->ANAC58                  --------->AHL20(2) ------->MYB46(3)    <---------ARR11(1)        --------->ANAC58                 --------->AHL20(2) ------->RAV1(1)    <---------CCA1(2)--------->GLK1(2)                        --------->TOE2(3) -ICU4     --------->YAB1<---------YAB1    --------->ZAT6                  ----------->RAV1(1) -------->YAB1   <-------TEIL   <------ZmHOX2a(2)                     <----------DOF2<-----------GT1   aacaatcatttcatcaaaattcgtatcattatcgatcacaatctagctctagcaattttgtttttgttttgtctttgcaacattaatttacgtattacat  16951200                                                      --------->SPL7                                                   <---------ANAC58                                                   <---------ANAC58                       --------->AHL20(2)                                          --------->YAB1                      <---------ARR14(2)       <-------MYC3                       ----------->GT1            --------->DAG2       <---------AHL20(2)       <-------MYC2                   <---------AHL20(2)            ---------->DOF2 ----------->GT1--       ------->MYC3        ----------->HVH21    --------->DAG2     <---------AHL20(2) --------->ICU4- ---GT1------->MYC2      --------->At4g35610   ---------->DOF2  ------->TEIL  --------->ARR14(2) ----   tacatagcatatgcttatacaaaaatgagttgacagataatttatcgtaaaaagcgttcccccatgtatataaagttgcatatttgtagtaattaaacac  16951300  Previous    Next  AGI:  At3g46120.1    Description:  ATPAP19/PAP19 (purple acid phosphatase 19); acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP11/PAP11 (PURPLE ACID PHOSPHATASE 11), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G18130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75519.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Purple acid phosphatase-like, N-terminal; (InterPro:IPR008963) Range:  from: 16946906    to: 16950751    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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