Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ARR11(3)                                                                     <---------ARR11(3)                                                           --------->REM1(2)                                                         --------->LBD16                   ----------->GT1                      <---------ANAC46              ------->GAMYB                             <---------ANAC58             <---------MYB52(2)                         <---------ANAC55(2)             --------->MYB46(3)                         --------->ANAC55(2)  --------->DEAR3(1)        --------->TOE1(3)                               <---------ANAC58  <---------ALFIN1 --------->GLK1(1) ----->YAB1--------->MYB52(1)                           <---------ANAC55(1) --------->ANAC46 ----->AHL20(2) ------->TEIL                           <-----------------------TaNAC69(2)  <---------GLK1(1) -YAB1  --------->TOE2(3)  <---------ICU4    <---------ALFIN1    ---------->DOF2    --------->MYB59<-   aaaactaaaaccctaacgaacatgaaaaatcagtacatcgttcttcccaactccaattccgtgttgacaaagctctccaccgaagttaagtcgaaatcca  16931500                                                        ------>NtERF2             --------->TOE2(3)      <---------ALFIN1                             --------->ATERF1(1)<---------ANAC55(2)    <---------ALFIN1                             <---------ANAC58     <---------ANAC58 --------->ANAC58                            <---------MYB52(1)       --------->ANAC55(2) --------->bZIP60(2)                        <-------GAMYB     ---------->DOF2    <---------ANAC55(2) --------->ANAC58                     <-----------HVH21 --------->LBD16    --------->MYB46(3) --------->ANAC55(1)                  <-----------TGA1 --------->ANAC46  <---------ARR14(2) <-------- --------->ANAC46                   <-----------STF1  <---------LBD16 <---------ANAC58      ========= --------ALFIN1--------->ZAT6   ---------->DOF2  <---------ANAC58     --------->ANAC46     <---------DAG2   aacacgccactctcttcccactactcgatttcttcaaagtcgtcaccgttgtcgtctccggcatgaaagaatgcgtaaccaatacgttagaagccttttc  16931600                            ----------->HVH21                          --------->O2                          --------->TGA1a                                                   <------NtERF2                          --------->ANAC55(2)                                             <---------DEAR3(1)                          <---------TGA1a                                                <------NtERF2                          <---------O2                                                   --------->ATERF1(1)                       ------>ZmHOX2a(1) <---------ANAC58        --------->RAP2.6(2)    <---------RAP2.6(3)               <---------TOE1(2)         <---------ANAC58        ----------->RAV1(1)   --------->RAP2.3(2)               <---------TOE2(2)       --------->ARR11(3)     --------->ANAC58         --------->DEAR3(1)   =================================bZIP_DOF          --------->ARR14(2)              --------->DEAR3(2)   <----------DOF2 <-----------GT1     <---------ARR11(3)     --------->ANAC58       --------->At4g35610 --DOF2       ------>ZmHOX2a(1)--------->MYB46(3)     <---------ARR14(2)      --------->ANAC58 ===================================bZIP_DOF ---------->ID1   --------->ANAC46--------->ANAC58   tcgttctttctcgttcctatgtttcctcatgtgaccaccaagagcttgtcccatcggaaactccaagccacaaatcggacaagtatgagccgtcgtcgta  16931700                                                              <---------ANAC58   <---------ANAC58                                                              <---------ANAC58   <---------ANAC58                                                           <XXXXXXXXXXXXXXXXXXXXMIR841                                                       <---------MYB52(1)        --------->ATERF1(1)                                                       <--------P               <---------ATERF1(1)                                                      <-------GAMYB             <------NtERF2                                                     <---------MYB46(3)        --------->ABI4(2)                                         <-----------GT1   <XXXXXXXXXXXXXXXXXXXXMIR841B                                      <----------DOF2<------MYB46(1)           ------>NtERF2                               <------ZmHOX2a(1)     <------MYB83    <---------ANAC46                             --------->LBD16         --------->MYB55(2)  <---------AtLEC2   ---------                            <-----------RAV1(2)    <---------MYB52(1)<---------ANAC58  ---------->DOF2    <---------ZAT6<----------DOF2----------->GT1 <-----------RAV1(1) <---------ANAC58 ------>ZmHOX2a(1)  <---------TOE1(2)         <---------LBD16--------->YAB1--------->MYB52(2)<---------DEAR3(1)     ---  <---------TOE2(2)        ------>ZmHOX2a(2)<-----------TGA1  <---------ANAC46 <---------ZAT18    ---   gtcgtagttttaggcttcttctttggtgatccaggaagtgatttatcgtcactgttggttagtttcgagtggcttgcacggtggcctcctaaagcttgga  16931800                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            <--------                                            <----------DOF2                                <---------DEAR3(1) ------->TEIL                          <-------MYC3   <---------ANAC46                  --------->ZAT2 ------------>WRI1                     ------->MYC3  <---------MYB52(1)                 <---------ZAT2 ------>ANAC58                        <---------ANAC55(2)             ------>ZmHOX2a(1) <---------At4g35610 ------>ANAC58                        --------->ANAC55(1)             --------->LBD16   --------->At4g35610   acgaatcgaagtctctctcacaagtcttgcatcggaaaacacgtttctttcttccgtcgtgttctccaattcctgataacaacatcagacagctcgccgc  16931900       <-----------HVH21      --------->DREB2C(2)      --------->DEAR3(1)    <---------At5g28300  --------->MYB46(3) ---------ARR14(2) ---------ARR11(1) -------->ARR14(2) --------CCA1(2) -------SPL7 ---->RAP2.3(1) --NtERF2 >NtERF2<---------MYB52(1) --->ABI4(1) ----ATERF1(1)                          <---------ARR11(3) -->RRTF1(3)                          --------->ICU4 -->RAP2.3(3)                         <---------YAB1 ---DEAR3(1)                        --------->YAB1                                                 -- -->RAP2.3(2)       <---------ICU4 --------->MYB46(3)                                            ---- -->ANAC46          --------->YAB1 <---------ATHB12                                              <--- -->DEAR3(1)    <---------YAB1    -------->P                                                <-------- ->RAP2.3(1) <------ZmHOX2a(2)  --------->MYB46(3)                                          <-------- ->ERF1<-----------TGA1   <----------DOF2                                                   <-------- ->DEAR4(2)--------->At4g35610 --------->At4g35610                                      <---------ANAC58 ->ATERF1(1)--------->ARR11(3) <---------At4g35610                                      <---------ANAC58 -ATERF1(1)<---------At4g35610--------->ANAC46                     <----------DOF2    <---------YAB1   cgtatccaccgtcagatcacgattatcactttcagcaaccatgattttagtttcgaatcgagcgagtgactttctagggttttgttttatgcttgtgtgt  16932000 ------->WRKY38(1)                                 <---------WOX13(1) ----->REM1(2)                                    <------------CBF ----GAMYB                                      <---------AHL20(2)                       ----------->GT1 -ANAC58              <------ZmHOX2a(1)    ----------->GT1   <-----------GT1     ----------------->AGL1 -ANAC58       <-----------TBP       ---------->DOF2  <---------TOE2(3)         ------>NtERF2 ------- -ANAC46  ------>ZmHOX2a(1)   <------------CBF  <---------YAB1               --------->At4g35610<----   gttgactcactcctcttatatataggagactggattgagtaaagacggttttaattgacgaaaataccctctcaagacttgctgcctaagttagtaaaaa  16932100                    ------->TEIL              --------->ICU4       <---------ANAC46      <---------DEAR3(1)                                                                      <------     <---------LBD16<-------TEIL             <----------DOF2                                  -------  <---------At4g35610                   <---------At5g28300                                   -------  <---------ZAT2--------->ARR11(3)     <-----------GT1                                        <------  --------->At4g35610                <-----------HVH21                    <---------KAN4(2)   <------  --------->ZAT2<---------------AtSPL8 <---------WRKY38(1)    ----------->GT1  --------->ATHB12     < -->ICU4 <---------ANAC46 ----------->GT1    <---------DAG2 <---------LBD16   <-------TEIL    ------- --------CBF---------->DOF2      --------->YAB1   --------->ZAT6      ----------->GT1  ---------->DOF2   ttgaagctgcggtgtaaagatgtacatgtagaaaatcagagtcaccgctttaacactaaaaactcggaaaaatggaaatattcatttgtgaaagaatata  16932200                                                                 <---------YAB1       <----------DOF2                                          --------->AHL20(2)      <---------ANAC58                                          <---------AHL20(2)             <-----      <---------ANAC58                                  <---------AHL20(2)                     ------  <------------CBF                     <---------ANAC55(2)    <---------YAB1                <-------- ---AHL20(1)                           --------->ANAC55(2) --------->ICU4                   --------- -->AHL20(1)                          <---------------AtSPL8<---------ICU4               --------->AHL20(2) -->ARR11(3)                          --------------->AtSPL8<---------AHL20(2)          --------->AHL20(2) ---ARR11(3)                          --------------->AtSPL3--------->AHL20(2)          <---------AHL20(2) ---AHL20(2)                          <---------------AtSPL3--------->ATHB51        <---------AHL20(2) ---------YAB1   <---------ATHB12 ---------->DOF2       --------->AHL20(2)          --------->AHL20(2) -->AHL20(2)------>ZmHOX2a(1) <------------CBF          <---------YAB1              <---------YAB1   ttcttattgctttcctccactaattagacaaatattgaaagacgtactataaccagttttaattatttttataaaaaaaacaagttttaattaatatata  16932300                                           --------->AHL20(2)                                 --------->TOE2(3)                                 --------->YAB1                                                 <----                               --------->ARR11(3)                                            <-------                               <---------ARR11(3)                                           <--------                              --------->YAB1  <---------AHL20(2)                           <------NtERF2         <---------AHL20(2)  --------->ICU4--------->AHL20(1)                             <---------RAP2.6(3)        --------->AHL20(2)<---------YAB1   <---------AHL20(1)                             ------>NtERF2    ------->TEIL        ----------->GT1   <---------AHL20(2)            <---------ANAC58 --------->RAP2.6(2) ----AHL20(2)       --------->AHL20(1) <---------ICU4                   <---------ANAC46 --------->RAP2.3(2) --->AHL20(2)       <---------AHL20(1) <---------AHL20(2)               <---------ANAC58 --------->RAP2.3(3) -AHL20(1)          --------->ARR11(3)--------->AHL20(2)               <-------TEIL      --------->DEAR3(1) >AHL20(1)    <---------AHL20(2)<---------YAB1--------->AHL20(2) <---------LBD16       <---------At4g35610   aatatgtatattatatataaaaaatattgtaattatcttaataaatattttattctaacgcggtctcttcgggttcgtgttccttcttaagccgcctttt  16932400  Previous    Next  AGI:  At3g46070.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G46080.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52061.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 16931430    to: 16931942    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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