Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------NtERF2                                                                          <-----       --------->LBD16                                                                       --------       <---------ATERF1(1)                                                              <---------ANAC58       <---------RAP2.6(3)                              ==========================================bZIP_DOF       ------>NtERF2         <------NtERF2              ---------->DOF2                 <---------TGA1a      --------->ATERF1(2)   ------>NtERF2        --------->DAG2            <---------HSFB2a(2)-------      <---------ATERF1(2)<---------ANAC58       ---------->DOF2  --------->GLK1(2)      <---------ANAC46     <---------LBD16  <----------DOF2           ==================================================bZIP_DOF     --------->RAP2.6(3)<---------AtMYB61  --------->ANAC58     <---------GLK1(2)       =============    ------>NtERF2  ------>NtERF2           --------->ANAC46     --------->ARR11(3)      <---------O2 ------------------ANAC81<---------ANAC58  --------->ANAC58   ----------->ARR10         <---------ANAC58   cttctctgccggcttcttctctgcctttggtgccattttcttcacacgaaaaaagtttcaaagaaagattctgaattttagaagatggagtcgtgagatc  16925100                                                                                                  ---                                                                                                  ===                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                    <------MYB46(1)               <--           ---------->ID1              <-----------TBP              <---------MYB46(3)            <--          <-------GAMYB       --------->At4g35610                   <------MYB83                 ----         --------->MYB52(2)   <---------At4g35610                   ----------->GT1              <---         <---------MYB46(3) <--------P------->TEIL                <---------WOX13(1)            <----   <---------ANAC46        <---------MYB52(1)                    <------------CBF              ------ -ZmHOX2a(2)             --------->MYB59                     <-------TEIL                      ------ ->At4g35610          --------->ARR14(2)                 --------->MYB59                   <---------WOX13(1) -->ARR11(3)    *TSS  <---------ARR14(2) <---------AHL20(2) --------->CCA1(2)             <---------- ====================================MYC_MYB ----------->HVH21   <---------GLK1(2)       <------ZmHOX2a(1)   aagttttgtgtttgttgtttagacgattcggtagctcatgtatatatatgaccatgaattagatacagattggttaattctcgtttcacgaggattgatg  16925200            <---------ANAC58            <---------ANAC58            <---------ANAC55(2)            <---------ANAC55(1)      <---------ARR11(3)      --------->AHL20(2)      <---------AHL20(1)      <---------AHL20(2)      --------->AHL20(1) ------>O2 <---------------AtSPL3 =========================MYC_MYB -------ANAC58 -------ANAC58 -------ANAC46                                                 <-----------ARR10 -------O2<-----------GT1                         --------->MYB52(1) -------bZIP60(2)  <---------MYB52(1)             <---------DOF5.7(2) -------TGA1a     <-------GAMYB                  --------->ZAT14 ------->STF1  ------->TEIL                      <---------WRKY38(1) --------------------TaNAC69(2)                  <---------ZAT14       <----------DOF2 -----TGA2(2)<---------SPL7                     ----------->HVH21     <---------DAG2      <---------At4g35610 ----->HVH21--------->ANAC55(2)         <-------GAMYB         <---------CCA1(2)        ---------->DOF2 ----->TGA1--------------->AtSPL3      <---------MYB46(3) --------->ANAC58 --------->AHL20(2) --CBF--------->ARR11(3)             <-----------HVH21    --------->ANAC58 <---------AHL20(2)      --   acgtggaatatattacgtaccgttagattagaataaatccgtcgttggcagtgaacggctaagcatctctcacctttttaaatgggccattaagcagcga  16925300                                                                            <---------O2                                                                            --------->O2      <---------AHL20(2)                                                    =========================     --------->AHL20(1)                                     --------->GLK1(2)     --------->AHL20(2)       ----------->GT1           --------->YAB1  ------>ZmHOX2a(1)     <---------AHL20(2)      ------->GAMYB             <---------AHL20(2)   <---------TGA1a     <---------AHL20(1)   <-----------GT1         <---------MYB59<---------MYB52(1)    --------->AHL20(2)<----------DOF2             --------->TOE2(3)     <---------HSFB2a(2) ------->YAB1     <-----------GT1                <---------ANAC55(2)    --------->HSFB2a(2)   atcaaaattaatttcgagttttatcttttaacgggctaaaatgggcttaatacctaaataataatctgttagtcctagacgtgaatcagttaagagaatg  16925400                                                        <--------ATHB1                                                        --------->YAB1                                                        <---------ICU4                          ----------->GT1               --------->ATHB51                          <------MYB46(1)              <---------ATHB12                          <---------MYB46(3)           <---------ATHB51       <---------YAB1                          <------MYB83             ------------>CBF         --------->YAB1                         --------->MYB59          ------->TEIL            <-----------TBP                  <-------TEIL                 --------->ANAC55(2)       ------->TEIL             ---------->DOF2                   <---------ANAC55(2)    <---------ANAC55(2)     --------->YAB1   --------->ATHB12      --------->ICU4            --------->ANAC55(2)           - =======================bZIP_DOF        <---------MYB59--------->ICU4--------->MYB59                -   ccatcaatgttgatacaaagtccatgtttggttacaaatgggcctaattatgtatcaataatgggcctagttatgtatttataatgggcttagttataca  16925500                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                <----------ID1                                                                 <-----                ----------->GT1                                                            <---------          ----------->HVH21                                                               --------->O2         --------->LBD16                      <---------ANAC58                            <---------TGA1a        <---------ANAC46                      <---------ANAC55(1)                         ===========        --------->ANAC55(2)                   <---------ANAC55(2)                         --------->TGA1a        <---------ANAC55(2)                   <---------ANAC46                            <---------O2        --------->O2                          <---------ANAC58                           <-----------        <---------O2                          --------->ANAC55(2)            --------->ANAC58 <------       <---------LBD16           ----------------->AGL3         <----------DOF2  --------->ANAC58<---    <-----------HVH21   *TSS    --------->TOE2(3)               ====================================bZIP_DOF ------>TEIL---------->DOF2     --------->TOE1(3)        <---------AHL20(2)  --------->ANAC58<------- -------->GLK1(2)    ---------->DOF2         <-----------------------TaNAC69(2)  --------->ANAC58<---   tgaatctgtcccgtgaaagcgataaaagcgaaaaccctaaaaatagttccgtcttctgtttaatctctttttcaaggccaagcgagcaagagacgtcgga  16925600   <---------At4g35610   --------->ATERF1(1)   <------NtERF2  ------>NtERF2  <---------ERF1  <---------MYB46(3)  <---------RAP2.3(1)  <---------DEAR3(2)  <---------ATERF1(1) <---------DEAR3(1) <---------RAP2.6(2) <---------ANAC46 --------->ATERF1(2) --------->DEAR3(1) -------->ATERF1(1) ------NtERF2 -------->DEAR4(2) -------->RAP2.3(1) --------DEAR4(2) --------ATERF1(1) --------RAP2.3(1) -------DEAR3(1) ------>ALFIN1 ------>ATERF1(1) ----->At4g35610                     <---------GLK1(2) -NtERF2            <---------TOE2(3)<---------ARR14(2) --HVH21     <---------TOE2(3)      <------NtERF2 ===============================MYC_MYB      <---------CCA1(2)                                   ---- ------------TaNAC69(2)<--------P  --------->LBD16                                         --------->DEAR3(1) ---DEAR3(2) <---------TOE1(2)    --------->LBD16                                         <---------LBD16 ------At4g35610    <---------TOE1(3)--------->ARR14(2)               <---------DAG2     --------->MYB52(1) --DEAR3(1)  <---------TOE2(2)   <---------LBD16    ------>ZmHOX2a(1) <----------DOF2   <---------ALFIN1 ------ABI4(1)     <-----------RAV1(2)--------->ARR14(2)    --------->At4g35610 <-----------RAV1(1)   gcggcggctactacttaggtttcaggttagtaatcgccggaatctccatctctcctctaatccgatgaactgctttattgttttgttggaacaccggctt  16925700                               <---------ARR14(2)                               --------->ARR14(2)                               --------->GLK1(2)                              <---------GLK1(2)                <---------TOE2(3)                                                                <---        --------->LBD16   --------->LBD16                        --------->ICU4 <---------ARR14(2) ------->GT1XXXXXXXXXXXXXXXXXXXX>MIR870>>>>>>>>>>>>>>>>>LFY ----------->GT1     --------->ARR14(2)   agttaatctccccaatttgatgtttctccagagaatctagattccaatgtcattttcagagtgtgtaatttttagggaatcgaattcgttccctctgtag  16925800                         <---------ANAC58                         <---------ANAC58                                                       -----                         <---------ANAC46                                                       <----                        <-------TEIL                                                            <----                       --------->CCA1(2)                                                       ------                      <---------GLK1(2)                                                        <-----                      --------->ARR11(1)                                                 --------->At4g35610                    ----------->ARR10                                                    --------->ZAT18         ------->TEIL --------->ARR14(2)                                               --------->ZAT14         <-------TEIL <---------ARR14(2)         <-----------GT1                       <---------ZAT14     --------------->AtSPL8               <---------TOE2(3)                            <---------ZAT18     <---------------AtSPL8    <---------At4g35610                               --------->GLK1(2) ------ARR11(3)    --------->YAB1      <---------WOX13(1)                 ----------->GT1<---------At4g35610   atgtttttatgtacatgtcaataagattcgtgaagctgttgatttatgtttttgcagtttttgaaattttgaagaatggtgagaatcagtgtgctcaatg  16925900                                                                                                 ----                                                                                             --------                                                                                             --------                                                                                             --------                                                --------->ICU4                           <-----------TGA1                                                <---------YAB1                      ------>ZmHOX2a(1) ---->YAB1                                 <------MYB46(1)                         <---------ANAC58 ----ATHB1                        ---------->DOF2--------->YAB1          --------->YAB1  <-----------HVH21 -----ICU4          <---------ZAT14        <------MYB83                 <---------YAB1  --------->YAB1 --->ICU4           --------->ZAT14      <-----------RAV1(2)      <---------TOE2(3)<---------ANAC58 ----ATHB12<---------------AtSPL8<------ZmHOX2a(1)               ---------->DOF2<---------ARR11(3)   atggtcttaagagtatgtacaatgcagagaagagaggaaagaggcaggttatgatcaggccttcttctaaagttatcatcaagttccttatcgtcatgca  16926000  Previous    Next  AGI:  At3g46030.1    Description:  HTB11; DNA binding. Identical to Histone H2B.7 [Arabidopsis Thaliana] (GB:Q9LZT0); similar to HTB9, DNA binding [Arabidopsis thaliana] (TAIR:AT3G45980.1); similar to unknown [Populus trichocarpa] (GB:ABK93993.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96597.1); similar to unknown [Picea sitchensis] (GB:ABK25288.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 16924433    to: 16925116    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46040.1    Description:  RPS15AD (ribosomal protein S15A D); structural constituent of ribosome. Identical to 40S ribosomal protein S15a-4 (RPS15AD) [Arabidopsis Thaliana] (GB:Q9LX88); similar to 40S ribosomal protein S15A (RPS15aF) [Arabidopsis thaliana] (TAIR:AT5G59850.1); similar to RPS15A (RIBOSOMAL PROTEIN S15A), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G07770.1); similar to RPS15A (RIBOSOMAL PROTEIN S15A), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G07770.2); similar to unknown [Solanum tuberosum] (GB:ABA46758.1); contains InterPro domain Ribosomal protein S8; (InterPro:IPR000630) Range:  from: 16925524    to: 16926744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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