Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <-----------GT1                                                                             <---------RAP2.6(3)                                                                             --------->LBD16                       ------>MYB83                                    <------ZmHOX2a(1)                       ------>MYB46(1)                         <---------------AGL15      <---------YAB1                     ------->GAMYB                            ----------------->AGL1    <---------At4g35610                   --------->ANAC58                     --------->AHL20(1)   --------->At5g28300 ----   --------->YAB1--------->MYB46(3)                     --------->AHL20(2)  --------->RAP2.6(2)  <--- <---------TOE2(3) --------->ANAC58                     <---------AHL20(2)  ----------->GT1  -------- ---->YAB1  <------ZmHOX2a(2)                   <----------DOF2======================================   atcaaggataatggatcaaacaaccaaatgttatcgaaattgatatataactttgaaattttttgcaataacaggaagccgtaaatactcttctgatttc  16921400                                        ------->GAMYB             <---------ARR14(2)--------->ZAT14       --------->CCA1(2)       <---------ZAT14 <---------ARR11(3) ----------->AGL15  ---------->DOF2  ----------->RAV1(1)                                   <---------ANAC55(2) ------------AGL15---------->DOF2    --------->MYB52(1)        <---------YAB1           <------ZmHOX2a(2) ->GLK1(1)  <------ZmHOX2a(1)  <---------ZAT18 --------->ARR11(3)                  --------->MYB52(1) ============MADS_MADS   ----------->RAV1(1)  --------->At4g35610          --------->WOX13(1)       -   aaattttagatagaggaatcgaaagagccacagtgaactcaacagagaagctctctcgcacagttttgattctaaatcagtcacaaaacgatcacataaa  16921500             --------->CCA1(2)             <------ZmHOX2a(2)         ------>ZmHOX2a(2)            >>>>>>>>>GATA-2           <------ZmHOX2a(2)            >>>>>>>>>GATA-4          --------->ARR14(2)            --------->AGP1           <---------ARR14(2)            >>>>>>>>>GATA-1          <---------ARR11(3)            >>>>>>>>>GATA-3          --------->ARR11(3)            <---------ARR11(3)       <-----------ARR10                           --------->ARR14(2)            --------->ARR11(3)       <---------AGP1                              <---------ARR14(2)     --------->TOE2(3)               --------->AGP1                              <---------ARR11(3)   --------->ARR14(2)          <---------ETT(2)                                ----------->ARR10   <---------ARR11(1)          --------->ZAT14                       <---------ANAC55(2)   <---------ARR11(3)          --------->ETT(2)                      --------->ANAC55(2)  <---------CCA1(2)      --------->ARR14(2)                      --------->GLK1(2)             ------  ------>MYB83------>ZmHOX2a(2)<---------ZAT14                  --------->ARR14(2)             ------  ------>MYB46(1)        --------->GLK1(2)                      <---------ARR14(2)  ----------->GT1  <---------ARR14(1)     <---------ARR11(3)      ----------->RAV1(1) <---------ANAC46          ------ -------->AtMYB61        <---------ARR14(2)     <----------ID1  <---------GLK1(2)--------->ARR11(3)   caccaaatcttagagatctaaaaccaaaatctgtatacagatctagcgaaacaacaaaatgagccagaatcgcgtaaacagaagatttgtatataagacg  16921600                           <------ZmHOX2a(2)                          --------->AGP1                          --------->ARR14(2)                          <---------ARR14(2)                                                  -------                      --------->ZAT14                                                         <------                      <---------ZAT14                                                      <---------ANAC58                  --------->ANAC58                                                         <---------ANAC58 --->ANAC46       --------->ANAC58                 --------->At4g35610                  <---------ARR14(2) --->ANAC58      <---------ZAT18                   <---------At4g35610     --------->YAB1 <-------TEIL --->ANAC58      --------->ZAT18         ----------->GT1               --------->ZAT6   --------->ARR14(2)   aaaccaaaatcgagagaagcacactacagatcgagataacaagtggaaaattgagcttaccatggctagagaaacactaatatcagagcaaattcgtggt  16921700                              --------->ATERF1(1)                              --------->At4g35610                             <---------ATERF1(1)                             <---------RAP2.3(1)                             ------>NtERF2                             <---------MYB46(3)                            <---------DEAR3(1)                            <---------RAP2.6(2)                            --------->ATERF1(2)                <---------CCA1(1)                   <-----------HVH21                <---------RVE1(1)              --------->GLK1(2)---------->ID1               --------->ARR11(3)       <---------LBD16        <-----------GT1               <---------ARR11(3)      --------->MYB52(1) <----------DOF2                      <-----               <---------ARR14(2)     ----------->HVH21  <---------DAG2             <----------DOF2 ---->GT1<------ZmHOX2a(1) --------->ATERF1(1) <---------ARR14(2)     <-----------GT1      <--------- ---MYB46(3) ----------->ARR10<------NtERF2    --------->ARR14(2) <----------DOF2<---------ARR11(3)   taaacgagagaggagaagatatttcttcgggcggctacaatcgacggagaatacggtcacctttttttcttttttcttctcaatttcttttctctttctt  16921800                                                                                             --------                                                                                             <-------                                                                                    <---------YAB1                                                         <------MYB83              <------------CBF                                                         <------MYB46(1)         <---------AHL20(2)                  --------->ZAT18                <--------HAHB4                  --------->AHL20(1)     <----------DOF2               --------->ANAC58     --------->MYB59          <---------YAB1     *TSS         <---------ZAT18  --------->ANAC58 <---------AHL20(2)          --------->YAB1     <---------DAG2                ----------->GT1 <---------YAB1               --------->AHL20(2)  - -----DOF2 <---------LBD16      <----------ID1   --------->YAB1            ------------>CBF --------- -DOF2    <---------LBD16 <---------YAB1        <---------YAB1  ------->TEIL   <---------ATHB12<-----   tcttcaactttattcgggagtccaccatattatagagacgaaaaaaaactattattatttggtatgtatttcaaattttcaataatattgttgaattatg  16921900                                             <------MYB46(1)                                             <------MYB83                                            --------->MYB111(1)                                            --------->MYB55(2)                                            --------->MYB46(2)                  <---------AHL20(2)        <---------MYB46(3)                 --------->AHL20(2)         --------->MYB111(2)              <---------AHL20(2)            <---------AtMYB61             <---------AHL20(2)      <---------YAB1             --------->AHL20(2)   <---------YAB1                                 --------->AHL20(2) ->YAB1      <---------AHL20(1)   --------->ICU4        --------->YAB1   --------------->AGL15 --ICU4   --------->YAB1        --------->YAB1          <---------ICU4<-----------GT1 ----------->CBF <---------AHL20(2)<---------ICU4      <---------ATHB12 <---------ANAC58          <-- >ICU4    <--------HAHB4       <-------TEIL<--------P  <---------ATHB51 <---------ANAC58          --- ----YAB1<---------YAB1    <---------YAB1  <---------MYB55(1)--------->ZAT6      <---------AHL20(2)   aattcaatactataattaattttatgtttttgattcattattttggtaggtgtttcaataataacactgatttttcttgttatataaataaactgaattt  16922000                                                                                      <------MYB83                                                                                      <------MYB46(1)                                                                                   <-------GAMYB                                       <-----------GT1                            --------->MYB52(2)                                 --------->ANAC58                     ----------->GT1 <---------MYB46(3)             <-----------GT1     <---------ANAC55(2)              --------->ATHB12--------->MYB55(2)       <---------AHL20(2)        ----------->GT1                 <---------ATHB12 --------->MYB111(2)   --------->AHL20(2)            --------->ANAC58         <---------SPL7          <-----------RAV1(1)   <---------AHL20(2)            --------->ANAC55(2)     --------->TOE2(1)        <---------MYB46(3)  <---------AHL20(2)    <---------AHL20(2)               --------->TOE1(1)  ---------->DOF2 -------AHL20(2)        --------->AHL20(2)              --------------->AtSPL8 ------------>MYB.PH3(2) ------>AHL20(2)       --------->AHL20(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)     -------   ttaatttatatttttaaactatctataaaattagtaagtaataacatttttgaatttcgtcgtaccattgattcgataaaaagtttgttggtttgagaac  16922100                                        --------->AtMYB61                                        ----                                     --------->ZAT6                                    --------->ATERF1(1)                                   <-----------GT1                                     <------NtERF2                                ----------->GT1                                       <---------ATERF1(1)                       <---------AHL20(1)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->AHL20(1)                   <-----------GT1          <---------DEAR3(1)       <----------DOF2 --------->ARR11(3)    --------->MYB46(3)        <-----------GT1------>NtERF2 -->ARR11(3)   ----------->GT1<---------ANAC46          --------->AHL20(2)        <---------DEAR3(1)   ttgattcaacttttaagaagtaaaaaatattgatgtgtaacaccacaacaactacaaaaaatatacttcattttcacaataagttcggcgtctccaaaaa  16922200                                                                                        <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(1)                                                                                       <---------AHL20(2)                                                                                       <---------ARR11(3)                                                             ----------->GT1           --------->ARR11(3)                                                         <---------AHL20(2)         --------->YAB1                          --------->YAB1                --------->AHL20(2)          --------->AHL20(2)                          --------->ATHB12              <---------AHL20(2)         <---------YAB1          --------->ARR11(3)                        <---------AHL20(2)          <---------AHL20(2)          <---------ARR11(3)   <------ZmHOX2a(1)    --------->AHL20(2)         --------->AHL20(2)        <---------TOE2(3)<---------YAB1         --------->ICU4           --------->ARR11(3)     XXXXXXXXXXXXXXXXXXXX>MIR1888  --------->AHL20(2)<---------AHL20(2)  <---------ARR11(3)    <----- ------>DOF2   <---------YAB1 ----------->GT1   <---------YAB1          <---------CCA1(2) <---------AHL20(2)   aaagataactaagatttatgaaaaacgatgataggaaaaaaattcaaatactgattaaataaatggtaaaacacatatctattttataatatatttttaa  16922300  Previous    Next  AGI:  At3g46010.1    Description:  ADF1 (ACTIN DEPOLYMERIZING FACTOR 1). Identical to Actin-depolymerizing factor 1 (ADF1) [Arabidopsis Thaliana] (GB:Q39250); similar to ADF4 (ACTIN DEPOLYMERIZING FACTOR 4), actin binding [Arabidopsis thaliana] (TAIR:AT5G59890.1); similar to Actin-depolymerizing factor 1 (ADF-1) (GB:Q9FVI2); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) Range:  from: 16920348    to: 16921805    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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