Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <------MYB83                                                                      <------MYB46(1)                                                                     --------->MYB59                                         --------->AHL20(2)  --------->ATHB51                            --------->GLK1(2)             --------->YAB1                            --------->ARR11(3)            <--------HAHB4                            <---------ARR11(3)           <---------YAB1                            <-----------ARR10    --------->AHL20(2)  <---------AtMYB61                           --------->RVE1(1) --------->AHL20(2)    <---------MYB52(1)                         --------->AHL20(2)  <---------AHL20(2)  <---------MYB46(3)     <---------ARR14(2)                  <---------AHL20(2)     --------->AHL20(1)  --------->ATHB12     <----------ID1 --DOF2           --------->AHL20(2)     <---------AHL20(2) <---------YAB1     ---------->DOF2   tatgttttagttggcacaaattaaaaaaaaaatctatcccaaattttttaaatatatgtattattattggttaggttttaaaaaagaacaaatatgggtt  16906800                                                                                                   --                                                                                                   <-                                                                                                <----                                                                                                -----                                                                                                -----                                                  ---------->DOF2           ---------->DOF2     -----         <---------AHL20(2)                     <---------MYB59<---------MYB52(1)             <------        <---------AHL20(2)                      --------->TOE2(3)        --------->ANAC58<---------DEAR3(2)        --------->AHL20(2)                     ----------------->AGL1    --------->ANAC58<------MYB46(1)   <---------MYB52(1)                          ----------------->AG    ---------->DOF2   <------MYB83 <---------ANAC58                           <---------MYB52(1)<-----------HVH21         <---------DEAR3(1) <---------ANAC46            --------->MYB46(3)====================================================== <---------ANAC58    <---------ALFIN1   ---------->ID1        <---------RAP2.6(3)---------->DOF2-----   atttcgtttattaattagtttcgacactctaacaaatgttttgtcccttacctaaagagaagaccgtcatgaacaaagcaaagaaaagagtcggtgtaac  16906900 --------->REM1(1) --------->bZIP60(2) --------->RAV1(1)    ----------->GT1                                             ---------->DOF2 --------ALFIN1 --------->YAB1 --------->ARR11(3)                               <XXXXXXXXXXXXXXXXXXXXMIR1886.2 -----bZIP60(1)--------------->AGL15                                         <---------AHL20(2) ---->bZIP60(1)<---------------AGL15                                     --------->ATHB12 ---->ANAC58  <-----------------AG                                      <---------ATHB12         >>>> ---->ANAC46  <-----------------AGL1                                    --------->ICU4<---------ARR11(3) -----GT1  ----------->HVH21   <---------ARR11(3)      <----------DOF2  <---------YAB1--------->ARR11(3) ==============================MADS_MADS      <---------ALFIN1         <---------TOE2(3)       <----- ---->ANAC58  <-----------------AGL2     <----------DOF2   <-----------GT1  --------->AHL20(2)-------   gccacatcatcccatgactcatattggtaaaactatcttctctctttcacacttcttctttttactttggactaatgatttaatcaaagatgtcatttta  16907000                                                         ----------->HVH21                                                       <---------ANAC58                                                       --------->TGA1a                                                       <---------TGA1a                                                       --------->bZIP60(1)                                                       --------->TGA2(1)                                                       <---------ANAC58                                                       <---------bZIP60(2)                                                       --------->O2                                                       <---------ANAC46                              <-------TEIL             <---------ANAC55(2)                            <---------ARR11(3)         <---------bZIP60(1)                            --------->ARR11(3)         <---------O2                     <---------ZAT2                            --------->ARR14(2)         <---------ANAC55(1)              <---------At4g35610                            <---------ARR14(2)         --------->ANAC55(2)              --------->At4g35610                          ----------->ARR10           ----------->STF1                  --------->ZAT2                  --------->ATHB12                  ----------->TGA1              --------->ICU4               --------->ANAC55(2)                  ----------->HVH21      <------------CBF       --- >>>>>MYB98    --------->ANAC46                 --------->ZAT2           <---------ARR11(3)       --- ------GT1     <---------ANAC55(2)          --------->MYB52(1)           --------->ARR11(3) <------NtERF2 -->AHL20(2)  >>>>>>>>>>AtSR1--------->CCA1(2) --------->ANAC46--------->ALFIN1 <---------At4g35610   acatatatgtataaaacgcgtaattgggaagatacacacacacacataccagctatgacgtgacagtgtgtgttagatattgagatgatgagctggcatc  16907100                                                                                                    <                                                                                                    -                                                                                                    =                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                           <---------RVE1(1)                                                                                           <---------CCA1(1)                                                                                          --------->ARR11(3)                    <-----------GT1                *TSS        --------->ARR11(3)         --------->AHL20(1)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------ARR11(3)         <---------ARR11(3)      --------->ZAT14              ------>ZmHOX2a(1)      <-----------GT1             ---------->DOF2 ----->P          <---------AHL20(2)        <----------DOF2   <---------CCA1(2)    --------->YAB1  <- ---->TEIL      ----------->TBP ---------->ID1    ----------->GT1                 <---------YAB1   <-   aacctctctatagtctctatataatccattctttgtcctctcttctctttacatgtaaattcacatatctctctctcttatttgatcataaagatattat  16907200       --------->ANAC58 ---------------AGL15 -------------->AGL15 ==============================MADS_MADS                                             ------>ZmHOX2a(2) -->ATHB12                  <----------DOF2                                      <---------YAB1 -->ATHB51                <---------HSFB2a(1)                             <---------TOE2(3) --YAB1--------->ANAC58   --------->HSFB2a(1)           ====================================HOX2a_HOX2a --AHL20(2)  <-----------------AGL3   ------>ZmHOX2a(1) ------>ZmHOX2a(1)<---------DOF5.7(2) --------ANAC58           <---------HSFC1(2)      <---------At4g35610  <---------MYB52(1)      <----- --------ANAC58           --------->HSFC1(2)      --------->At4g35610  --------->DOF5.7(2)    <------   tgcttcttcaagtaaacaaaaaatgggaagctttctcttcctcatcgtagtcatcttcctcttctcttcatccgttaacgcttgtgatcgatgtcttcac  16907300                           <---------At4g35610                        ------>NtERF2                     <---------At4g35610                     ------>ZmHOX2a(1)                                                        <------         --------->At4g35610  <---------At4g35610                                             <------   ---------->DOF2   --------->At4g35610                                                      <------ ----At5g28300 <-----------GT1--------->At4g35610           <----------DOF2 ------->TEIL   <---------CCA1(2) -----GT1<---------At4g35610  --------->ZAT14      <-----------GT1<-----------GT1  <----------DOF2   cgttctaaagcagcttatttctcctctgcctctgctctctcttgtaaacattttaactacttcttttttaactatctgtatgtttcttttctcatgtctt  16907400                            <---------ANAC58                            <---------ANAC58                      <---------ANAC58                      <---------ANAC58               <---------ZAT2                               ----------->HVH21         <---------CCA1(2)               <---------At4g35610                          --------->LBD16<---------At4g35610 ---ANAC58     ----------->RAV1(2)                         --------->DEAR3(1)--------->GLK1(1) ---ANAC46     --------->ZAT2                             <---------LBD16  --------->At4g35610    <-- ---ANAC58     --------->At4g35610  <----------DOF2<-----------ARR10    <---------At4g35610  --------   gtttatgtgttttttgcagctggagcttgtgcttatggctctatggctacgagtttcttcgccggacatatcgctgcagctatcccttctatctacaaag  16907500               <---------ANAC58               <---------ANAC58              <---------At4g35610              --------->ZAT2     ------>NtERF2    <---------ATERF1(2)    --------->ATERF1(2)   <---------ANAC58                                        ---------->DOF2   <---------ANAC58                                --------->REM1(2)  --------->ABI4(2)              <-------TEIL --------->At4g35610           --------->YAB1  <---------ZAT2              --------->At4g35610  --------->ZAT14          <---------ICU4  --------->ZAT2    <----------DOF2           <---------ZAT2               --------->ICU4  <---------At4g35610         <---------At4g35610 --------->ALFIN1         <---------YAB1  --------->At4g35610    --------->ANAC46     --------->ZAT2      --------->MYB46(3) --------->ALFIN1  <---------ANAC58 --------->ANAC58       --------->MYB52(1) -------DEAR3(1)   <---------ANAC58 --------->ANAC58   --------->ZAT6   <---------YAB1              - -->DOF2  --------->ALFIN1<-----------HVH21   <---------At4g35610>>>>>>>>>>>>>>>>>LFY             <--   acggtgctggctgtggagcttgctttcaagtcagatgcaagaaccctaagctgtgtagcactaaaggaaccattgtgatgatcacagacttaaacaagag  16907600          ==============HOX2a_HOX2a          ------>ZmHOX2a(2)         ===============HOX2a_HOX2a         <------ZmHOX2a(2)        --------->ARR14(2)        <---------ARR14(2)        --------->ARR11(3)                                             --------->ARR11(3)   --------->MYB52(1)                                              ---------->DOF2            <------   ------>MYB46(1)                                             ----------->HVH21             <-------   ------>MYB83                                              <---------At4g35610    --------->ANAC46 --------->AtMYB61            <----------DOF2                --------->At4g35610    --------->ANAC58 <---------MYB59 ------>ZmHOX2a(1)                        <------MYB83 <---------ARR11(3)    -------- -------->MYB46(3)     --------->At4g35610                <------MYB46(1)           --------->ANAC58 ---------GT1   --------->TOE2(3)                     <-----------RAV1(1)    --------->HSFB2a(2)   taaccaaaccgatcttgtccttagtagcagagcttttagagctatggctaaacctattgttggtgctgacaaagaccttctcaaacaaggcattgtcgac  16907700  Previous    Next  AGI:  At3g45970.1    Description:  ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1). Identical to Expansin-like A1 precursor (EXLA1) [Arabidopsis Thaliana] (GB:Q9LZT4); similar to ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2) [Arabidopsis thaliana] (TAIR:AT4G38400.1); similar to unknown [Populus trichocarpa] (GB:ABK93417.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPr Range:  from: 16907151    to: 16908293    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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