Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------AGP1                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                                <---------ARR14(2)                                                                <-----------ARR10                                                           <---------ANAC58                                                           <---------ANAC46                                                           <---------ANAC58                                                          <-------TEIL         ----------->HVH21                              --------->ARR14(2)                  <-------- <---------At4g35610                                    <---------ARR14(2)               ------>MYB46(1) --------->At4g35610                             <---------ARR11(3)          ----------->HVH21 ----ZmHOX2a(2)                <---------ANAC46--------->ANAC58 --------->ARR14(2)       ------>MYB83 ----->ARR14(2)     <----------DOF2            --------->ANAC58<---------CCA1(2)       <---------MYB59 ------ARR14(2)----------->HVH21 ----------->HVH21 ----------->GT1------>ZmHOX2a(2)    --------->AtMYB61   atcagcttaatgtgactgtgacctttgatactgatgtgaagcctaaggcaagatagtatatacgtggatcttctctaatgtgacataaaccaaacctttc  16893900                                    --------->AHL20(2)                                   <---------ATHB51 <---------ANAC58                                   --------->AHL20(2)   <---------ZAT6        <---------MYB52(1)                                   --------->ICU4   <---------ANAC58     <-----------GT1            -         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <-----------GT1    <---------ICU4      <---------AHL20(2)       <---------DAG2              <---------AHL20(2)   ----------->GT1 <-----------GT1--------->AHL20(2)    <-----------GT1     --------->MYB46(3)        <---------AHL20(2)------->TEIL      <---------AHL20(1) -DAG2 <----------DOF2<-----------GT1        <---------AHL20(2)  <---------YAB1       --------->AHL20(1)   gatgtataactttatgttattagttaaccattgtgaaataattttgttttatttacttgtgttaaatatgaatattacccgttcgtaatatatatatgtg  16894000                                                 ----------->GT1                                         <---------MYB52(1)                               <----------DOF2                                       <---------ANAC58                                <---------ANAC46                             --------->ATHB12  <---------At5g28300                    <------NtERF2                            --------->ICU4    --------->MYB52(1)                    --------->ALFIN1                            <---------YAB1 --------->MYB52(2)                       <---------DEAR3(1)              <---------AHL20(2) <---------AHL20(2)                                --------->LBD16              --------->AHL20(2) --------->AHL20(2)                               <---------ANAC58              --------->AHL20(1)--------->AHL20(2)--------->At5g28300      --------->TOE2(3)      <-----------GT1     --------->YAB1--------->TOE2(3)       ---------->ID1    <---------ANAC58 ---------->GT1          <---------YAB1<---------ANAC58    --------->GLK1(2)------>ZmHOX2a(1)   aaatgttataacgaaattttttgttctatgatgatttaatttcgttagtaacggtgaaaagaatttggcgctatattcctcaatccgtggcgcttatttg  16894100                                  --------->ARR14(2)                                  <---------ARR14(2)                              --------->LBD16                                 <---------ANAC55(2)                             <---------ANAC46                                 --------->ANAC55(2)                            <---------LBD16                          --------->MYB46(3)                         <-----------HVH21                    <---------AHL20(2)                      --------->ANAC58                       <---------AHL20(2)                     <                      --------->ANAC46                       --------->AHL20(2)                   ---                      --------->ANAC58              ----------->GT1--------->MYB52(1)<---------YAB1 -              <-----------------AGL1------>ZmHOX2a(2)   --------->AHL20(2)   <---------ICU4      ----           <----------DOF2----------->HVH21--------->YAB1<---------AHL20(2) --------->ICU4      <----   aaaatttcataaactttcacttacaggcatcacggggatcgacaatattaagcgtcgataaaattaaatcaacggctaataagtaatctcattgttcacc  16894200       <---------At4g35610       --------->At4g35610    --------->DOF5.7(2)    <---------MYB52(1) ------>ZmHOX2a(2)   <-------GAMYB      <------ZmHOX2a(2)                  ==================================HOX2a_HOX2a  ------>ZmHOX2a(2)  <---------AGP1                      <------ZmHOX2a(2) <------ZmHOX2a(2)   --------->ARR11(3)           --------->WOX13(1) ---------ARR14(2)   --------->AGP1             <---------ATHB12 ------>LBD16    <---------MYB52(1)             ------------>CBF----------->GT1     ------>ZmHOX2a(1) -------->ARR14(2)   <---------ARR11(3) <---------MYB46(3)<-------TEIL--------->AHL20(2) ----->ANAC46   <-----------HVH21   ----------->HVH21   --------->AGP1----------->TBP -----LBD16   --------->MYB46(3)  <---------At4g35610 --------->MYB59 <---------AHL20(2)      <------   cggatcgttatctgcaaccgttagatctaaaaacacatctgatggttcaaatcaattagatccatcttgtatataaatgacatctcctcttaacaaaatt  16894300                                                                                             <------NtERF2                      <---------ARR11(3)                                             ---------->DOF2                      --------->ARR11(3)                                        <---------ANAC46                    <---------AHL20(2)                                      --------->MYB59 ---------                   <---------AHL20(2)                                       >>>>>>>GRF7--------->DAG2             --------->TOE2(3)                                             <-----------RAV1(2)   <---------ATHB12--------->AHL20(2)                                    <-----------HVH21  --------- *TSS --------->At4g35610                   --------->LBD16    <----------DOF2  <---------ANAC58    - ---GLK1(2)  --------->YAB1     ----------->GT1            <---------ARR11(3)   <---------ANAC58 <---   ctcaaatcatctcaatctcaattaaatcttcaaatcgaaaaatttccgaagaaaaattcaagttcctttagaaaatgtcaggtcgtggaaagggaggcaa  16894400                                   --------->GLK1(2)                                 <---------HSFC1(2)                                 --------->HSFB2a(1)                                 --------->HSFC1(2)                                 <---------HSFB2a(1)                                 <------MYB83                                 <------MYB46(1)                     --------->LBD16                       <-----------TGA1                             --------->TOE1(2)                      --------->ANAC58                              --------->TOE2(2)                      --------->ANAC46                             --------->DEAR3(2)              <-       ---------->DOF2--------->ANAC58                          --------->ZAT14       <---------ANAC46    xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                          ---------->DOF2  <---------ARR14(2)<- >ANAC58    --------->ALFIN1  <------ZmHOX2a(1)                 <---------ZAT14  --------->ARR14(2)-- >ANAC58 --------->DAG2<-----------HVH21              --------->ANAC46    --------->GLK1(2)     <---- -------->ALFIN1    <---------ALFIN1                  --------->ANAC58   <---------ARR14(2)     ----- ------TOE2(3)      --------->MYB52(1)                --------->ANAC58   --------->ARR14(2)  <-------   aggtttgggcaaaggtggagccaaacgtcataggaaggttctgagagacaacatccaaggaatcactaaaccggcgattcggagattggctcgtagaggt  16894500                                         <---------ANAC46                                         <---------ANAC58                                         <---------ANAC58                                      --------->ALFIN1                                     <-------MYC3                                    <---------ANAC58                                     -------->ABF1                                   <---------ANAC58                                     ------->MYC2                                   --------->MYB52(2)                                     <-------MYC4                                 <---------MYB52(1)                                     ------->MYC4                                --------->At5g28300                                     ------->PIF5                                <-------GAMYB                                     <-------PIF5     <----------DOF2          <---------------------WRI1                                     ------->MYC3   <---------RVE1(1)          <------NtERF2                                     <-------MYC2  <---------ARR11(3)         ------>NtERF2                                    --------->ANAC55(2)                      <---------bZIP60(2)                                    >>>>>>>>>>HY5  --------->ARR14(3)        --------->bZIP60(1)                                    =============================bZIP_DOF    <---------bZIP60(1)                                    <---------bZIP60(2)                    <---------ATERF1(1)                                    --------->O2   --------->ARR11(3)     ----------->HVH21                                    <---------ANAC55(2)                   ----------->TGA1                                    <---------O2   --------->AGP1         <---------MYB52(1)      --- --------ANAC46                     --------->TGA1a<---------AGP1        --------->LBD16          --- --------ZAT6                       <---------TGA1a--------->ARR14(2)    <-----------HVH21       <--- --------->GT1                      >>>>>>>>>>ABI5 <---------ARR14(2)   --------->ANAC46         ---- -----AtMYB61                   --------->CCA1(2)  <---------ARR14(3)   --------->ANAC55(2)    ------ ---->ALFIN1           ------>ZmHOX2a(2)<------NtERF2------>ZmHOX2a(2)  <---------ANAC58   --------->ANAC46 --AtMYB61           --------->AGP1 >>>>>>>>>>AtMYC2<------ZmHOX2a(2)   <---------ANAC58 --------->ZAT6   ggtgttaaacgtattagtggtctgatctacgaagagacacgtggcgttctcaagatctttttggagaatgttatccgtgacgccgttacttacactgagc  16894600                                                                              --------->ATERF1(1)                                                                              <------NtERF2                                                                             ------>NtERF2                                                                             <---------DEAR3(2)                                                                             <---------MYB46(3)                                                                             <---------ERF1                                                                             <---------RAP2.3(1)                                                                            <---------RAP2.3(2)                                                                           <---------LBD16                                                                           <---------At4g35610                                                                           --------->ATERF1(1)                                                                          <---------RAP2.3(1)                                                          --------->ARR11(3)<---------RAP2.6(2)       <------ZmHOX2a(1)                                  <---------ARR11(3)<---------DEAR3(1) ------>ANAC58             ------->TEIL             --------->ANAC58     <---------DEAR3(1)  <------- ------>ANAC58 --------->WRKY38(1)                  --------->ANAC58  --------->ARR14(2)    <-------- ------ZAT18   ----------->HVH21                --------->CCA1(2)     <---------GLK1(2)    >>>>>>>>>ARR2 ----->ZAT18  --------->At5g28300              <----------ID1         <---------ARR14(2)  --------->ATHB12 --->ZAT2   <---------DEAR3(1)          <---------------AGL15     <---------LBD16        <---------YAB1   acgctcggaggaagacggtgactgctatggatgttgtttatgctcttaagagacaaggaagaactctctacggattcggcggctagggtttttgattgtt  16894700                                                                                               ------                                                                                              <------                                                                                            <--------                                                                                            <--------                                             <---------ZAT6                      <-----------RAV1(1)                                           <------MYB83                   <---------TOE2(3) <--------                                       <---------ARR14(2)       ---------->DOF2<-------GAMYB---------                                       --------->ARR14(2)      <---------AHL20(2)<---------MYB46(3)                                      <------ZmHOX2a(1)        --------->AHL20(2)<---------REM1(1)<--                         ----------->GT1   <------MYB46(1) <---------AHL20(2) <---------MYB46(3) <--- --MYB46(3)            <------ZmHOX2a(1)  <---------AtMYB61--------->ICU4 <---------TOE1(3) <-------- -WOX13(1)    --------->TOE2(3)    <---------LBD16         --------->AHL20(2) --------->MYB111(2)<---   gttttttgtgtttctacgtttattaggatgttaattttcaggatttggtgttaacttcgaaaaaattaaagaattgaaggttgttgttgcaatttcgtga  16894800  Previous    Next  AGI:  At3g45920.1    Description:  receptor protein kinase-related. similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to receptor-like protein kinase [Arabis gemmifera] (GB:BAC80241.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16893167    to: 16893986    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g45930.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G53730.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 16894301    to: 16894861    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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