Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ICU4                           ------>MYB83                          --------->ICU4                            ------>MYB46(1)                  --------->ANAC58                                ------->GAMYB                 -----                  --------->ANAC55(2)                   ------>NtERF2                         <------               ----------->HVH21                        --------->LBD16               <---------ATHB12              <-----------HVH21                       <---------LBD16                --------->ANAC58             --------->bZIP60(1)                  <---------At4g35610                --------->ANAC46             <---------bZIP60(1)                  --------->ZAT2--------->ANAC58     --------->ANAC58 <----------DOF2  <---------ANAC55(2)        <-------TEIL     --------->MYB46(3)  --------->ZAT18 ----->ZmHOX2a(2) --------->ANAC58 ------>MYB46(1)--------->At4g35610        --------->LBD16 <------- ------>ARR11(3) <---------LBD16   ------>MYB83   <---------ZAT2--------->ANAC58  <---------ZAT18<--- -------ARR11(3)--------->MYB52(1)--------->WOX13(1) --------->MYB52(1)   ------>NtERF2    <---------ARR11(3)   gatctttatgaaatgaagtcacggagtcatcagtaccaatccaaaggttcacagcttccggcgaacaaccaaatgcctccgtagcccactcaatatcacc  16882100                                                                   <-----------HVH21                                                                  --------->TOE1(3)                                                                ------>MYB46(1)                     <---------ARR14(2)                         -------->P                     --------->ARR14(2)                         ------>MYB83                <-----------HVH21                              ------>MYB83               --------->DEAR3(1)                            <---------MYB59               ------->GAMYB                                 --------->MYB46(3)            --------->MYB52(1)                              --------->ANAC58         --------->ANAC58                                   --------->ANAC46                    -----         --------->ANAC58                                   --------->ANAC58         --------->ATHB12 ---->DEAR3(1)--------->MYB46(3)                  <-------GAMYB------>MYB46(1)      <---------YAB1 ---At5g28300 --------->DEAR3(2)<---------HSFB2a(2)      --------->ARR14(2)      --------->ANAC46 ----GT1 --------->ANAC46       --------->HSFB2a(2)      <---------ARR14(2)<----------DOF2      ----- --------HVH21<------------AtMYB77               <-----------RAV1(1)       ------>ZmHOX2a(1)---------   gtcgcagtctaacgcaaccgtcgaatactccgttctaaaacaatcgttttgctgttgcaaatacccaaccttcagtcctttacacgacgattgaacaacc  16882200                                                                               --------->RAP2.3(3)                                                                               --------->DEAR3(1)                                                                              --------->ATERF1(1)                                                                              --------->ERF1                                                                            --------->ANAC46                                                                           <---------ZAT14                                                                           <---------LBD16                                                                           --------->ZAT18                                                                           --------->At4g35610                                                                         <---------DEAR3(1)                                                                        --------->ATERF1(1)                                                                        <------NtERF2                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                       <---------SPL7                                                                      <---------ANAC58                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                     <------NtERF2                                                                   <---------RAP2.3(3)                                                                   <---------bZIP60(1)                                                                   <---------RAP2.6(2)                                                                   <---------DEAR3(1)                                                                   --------->bZIP60(1)                                                                  --------->ATERF1(1)                    <----------DOF2                              <---------ATERF1(1)                   <---------HSFB2a(1)                          ----------->HVH21   <---------MYB52(1)         --------->LBD16                                        ----------->TGA1<---------At4g35610         <---------HSFB2a(2)                       <------ZmHOX2a(2) --------->ATERF1(1)         --------->HSFB2a(2)                      <---------ARR11(3)<---------RAP2.3(1) <------ZmHOX2a(1)        <---------LBD16                           --------->ARR11(3)------>NtERF2  <-----------HVH21        --------->HSFB2a(2)        --------->DEAR3(1)         --------->LBD16--------->At4g35610       <---------LBD16           --------->At4g35610          <---------At4g35610  <---------RAP2.6(3) ---->TOE1(3)      --------->HSFB2a(1)           --------->YAB1<-----------HVH21------>NtERF2   <---- ---->TOE2(3)      <---------HSFC1(2)         ---------->DOF2 --------->At4g35610 <---------MYB46(3) >MYB46(3)         --------->HSFC1(2)   ----------->GT1     <---------LBD16<---------At4g35610-------   ttaagagcctccgggaacagaactttctcaacatgagccgaagcgaaacaaagatcactatctccggtgacggcgtctgcgcagccgttaggagtgagat  16882300                                            <------ZmHOX2a(2)                                            --------->At4g35610                                            <---------At4g35610                                           <---------AGP1                                           <---------ARR14(2)                ----------->HVH21          <---------ARR11(3)          <---------ATHB12              --------->At4g35610          <-----------ARR10      <------NtERF2           --------->TGA2(2)               --------->GLK1(2)     ------>NtERF2          <-----------HVH21               <---------ARR14(1)     <---------ATERF1(1)          <-----------TGA1                <---------CCA1(2)      --------->LBD16         --------->ANAC46    <---------MYB52(1)                  --------->ORA47(1)         --------->bZIP60(2) <-----------HVH21----------->HVH21 --------->DEAR3(1)        <-----------STF1    --------->LBD16--------->ARR14(2)   <---------ATERF1(2) <---------ANAC58         <---------LBD16--------->LBD16        --------->ATERF1(2) <---------ANAC58   ---------->DOF2     --------->RAP2.6(2)  --------->ANAC46 -----REM1(1) ----------->RAV1(2)      <---------LBD16     <-----------GT1                          < -->At4g35610 <---------At4g35610  <--------P------>ZmHOX2a(2) --------->ATERF1(1)<----------DOF2   <   gtagcgagacaacgtcatctgacaaagctccggtgaggtaagccggatctgaccagagttttaacgccggccaatgagtaatagctttggagattacaca  16882400              --------->ANAC46              <---------ANAC55(2)           <-------GAMYB              --------->ANAC58             <---------MYB46(3)              --------->ANAC58         ----------->HVH21              <---------O2             --------->ARR14(2)    <------ZmHOX2a(2)--------->At4g35610              --------->ANAC55(2)  <---------LBD16 --------->GLK1(2)          <---------At4g35610 ---------ANAC58      <---------ANAC46 <---------ARR14(2)    =====================HOX2a_HOX2a ---------ANAC58     <---------LBD16 --------->LBD16 --------->YAB1        ------>ZmHOX2a(1)  -------   aggcttgctctgagacacgtagtttcggagaaacttcaccggagacggttgagaatcaaaacgatcgattttagttcctaagctcaattctctcacttct  16882500                                                    --------->AHL20(2)                                                    <---------AHL20(1)                                                    <---------AHL20(2)                                            --------->LBD16                                           <---------ANAC58                                           <---------ANAC58                                       ---                                    --------->AHL20(2)                                           ----                                    <---------AHL20(2)                                           <---                                    --------->AHL20(1)                 --------->ANAC55(2)     <-----                                   --------->AHL20(2)                  --------->ANAC55(1)   <-------                            <---------TOE2(3)<------NtERF2             --------->ANAC46    <---------AHL20(2)     <---------GLK1(2)     >>>>>>>>>WRKY18 <---------ANAC46            <---------ANAC55(2) --------->AHL20(2)   --------->AHL20(2)     --------->WRKY12<---------LBD16          <-----------GT1        <---------AHL20(2) -->ZAT14        <----------DOF2 *TSS <------------CBF    <---------LBD16           --------->TOE2(3)   ctccataaattctctatctctttagccattgacgaaaaaaaattggcgggacaaaaaatttgggggttttaacacataaccaagaaccctaatttatatt  16882600        ----------->GT1        <----------ID1      ---------->DOF2                  <------ZmHOX2a(1) ------->DOF2                   <---------AHL20(2) ----->AHL20(2)                 --------->AHL20(2) ------AHL20(2)                --------->YAB1 ------TBP                    <---------YAB1                        <------ZmHOX2a(1)            <--- --------AGL15                ----------->TBP                     *TSS  >>>>>>>>>TBF1            <---   taaagaaaaaaagaaaaaaaactgtttttgttataaaaataggatttttgaaataaacttgtttcgaagaggaagaagaagatgagttgttcttatctac  16882700                                   <---------ANAC58                                 --------->ZAT14                                 <---------ZAT14                                --------->ALFIN1                               --------->ATERF1(1)                              <---------DEAR3(2)                              <---------MYB46(3)                             <---------DEAR3(1)                             --------->ALFIN1           <---------ANAC46                          --------->ANAC46             <------NtERF2                         <---------LBD16            <------NtERF2                       ----------->HVH21            <---------ZAT2                  ------>NtERF2                       <---------REM1(2)            --------->ZAT2                  --------->LBD16                  <------NtERF2<------NtERF2       --------->LBD16                 --------->ANAC46                 <-----------HVH21 <---------ANAC46--------->ANAC46               <---------LBD16                <---------DEAR3(1) <---------ANAC58------>NtERF2             <---------ATHB12                <---------O2 <---------DREB2C(2)  <---------LBD16          --------->WOX13(1)    ----------->TGA1<---------DEAR3(2)            --------->LBD16      --------->ANAC46          ----    ----------->HVH21 <-----------HVH21           --------->ANAC46     --------->ANAC58  --------->MYB46(3)  <---------At4g35610 <----------DOF2            <---------LBD16       --------->ANAC58 <------NtERF2 ------DAG2     --------->O2<---------ABI4(1)<---------ANAC58         <---------LBD16  --------->RAP2.6(2) -------DOF2  <-----------HVH21<-------GAMYB <---------ANAC58        <---------ALFIN1<---------MYB52(1)   tttctggtgacgcttccgtcgtcgcttcacggcggtggagtgatgtttcttcccggcagcgtttatttctcccacggcaatcactccggcagccatcggg  16882800                                                                                                 <---                                                                                            <--------                                                                                     <---------ZAT14                  --------->SPL7                                                    <----------DOF2              <-------TEIL                                                          =================          --------->LBD16                  <---------ICU4                     <---------ANAC46   ----         --------->HSFB2a(2)              <---------YAB1  <---------ATHB12    <---------ANAC58   ----         <---------HSFB2a(2)             <---------ARR11(3)      ----------->HVH21 <---------ANAC58        <---------LBD16                  --------->ARR11(3)    --------->ANAC46    <---------ANAC58 ---------->ID1<---------ANAC58         --------->YAB1  --------->WOX13(1)    <---------ANAC58   <--- ----->ARR14(2)<---------ANAC58 <---------TOE2(3)   --------->ZAT14           <---------AtLEC2<------   ttcttcgttttcccgatgcgtccgattagtcgctaatgtaaatgatcatttcagtaaacaatcactcgcgacgagaaattgcttggcttcagtgtttagt  16882900                                                                   <------NtERF2                                                                   --------->RAP2.3(1)                                                                  <---------DEAR4(2)                                                                 <---------ATERF1(2)                                                                 <---------RAP2.3(3)                                                                 --------->ATERF1(2)                                                    <------NtERF2<---------ANAC46                                                    --------->ATERF1(1)                                                   --------->LBD16<---------ATERF1(1)                                                  <---------ANAC46------>NtERF2                                                  <---------ANAC58<---------ERF1                                                  <---------ANAC58<---------ORA47(2)                                                  <---------DEAR3(1)                                                 <------NtERF2   <---------RAP2.3(2)                                                 --------->ATERF1(1)                                                 <---------LBD16--------->ATERF1(1)                                                ------>NtERF2   <------NtERF2                                               ----------->HVH21<---------ABI4(1)                                               --------->ALFIN1 --------->DREB2C(1)                                               <---------AtMYB61--------->RAP2.3(1)                                               <---------DEAR3(1)<---------DEAR3(1)                                              <-------GAMYB     <---------At4g35610                                              <---------ABI4(1) --------->DEAR4(2)                                              <------NtERF2    <---------RAP2.6(1)                                             <---------DEAR3(2)<---------RRTF1(1)                                             <---------MYB46(3)------>NtERF2                                             <---------DEAR4(2)<---------ATERF1(1)                                             <---------ATERF1(1)--------->At4g35610                                            <---------DREB2C(2)<---------DEAR4(2)                                            <---------AtMYB61  <---------ORA47(2)                                            <---------DEAR3(1) <---------RAP2.3(1)                                            <---------ANAC46   <---------ERF1                                            --------->ALFIN1  <---------RAP2.3(3)                                           --------->ATERF1(1)<---------RRTF1(2)                                           <---------ABI4(1)  <---------DREB2C(2)                                           <------NtERF2      <---------RAP2.6(2)                                          <---------ORA47(2)  <---------RAP2.3(2)                                          <---------RAP2.3(1) <---------RRTF1(3)                                          <---------ERF1  --------->ATERF1(1)                                          <---------DEAR4(2)  <---------DEAR3(1)                              --------->MYB52(1)<---------MYB46(3)<---------RAP2.3(1)                           --------->YAB1 ------>NtERF2 <---------ARR14(2)                           -------->HAHB4 <---------ATERF1(1) --------->DEAR3(1)                           <---------ICU4 <---------RAP2.6(1) <---------ATERF1(2)                          --------->ICU4  <---------RRTF1(1) <---------ABI4(1)                          <---------YAB1 <---------ANAC46<---------ATERF1(1)      <---------ANAC58  -------->HAHB4   --------->ATERF1(2) --------->ATERF1(1)      <---------ANAC46  <---------ICU4   <---------RAP2.3(3) <------NtERF2      <---------ANAC58 <---------ATHB51  <---------DREB2C(2)<---------DEAR4(2)  <---------TGA1a      --------->ICU4    <---------RRTF1(2)<---------RAP2.3(2)  ========================MYC_MYB        <---------RRTF1(3)<---------RAP2.3(3) ------ZAT14       --------->At5g28300   <---------RAP2.3(2)<---------ORA47(2) -ZAT14 --------->ALFIN1--------->YAB1   <---------RAP2.6(2)<---------RAP2.3(1) ===========bZIP_DOF --------->YAB1      <---------ATERF1(2)<---------ATERF1(1) ----->ZAT18      ----------->GT1        <---------DEAR3(1)<---------DEAR3(1)   <---------YAB1 ----->ZAT14      ------->GAMYB    --------->ARR14(2)   ----------->HVH21     <---------At4g35610 ------ZAT18   --------->MYB52(1)  <---------ARR14(2)  <------ZmHOX2a(1)      --------->YAB1 ---ANAC46   <---------MYB52(2)  ------->GAMYB--------->ATERF1(1)--------->DEAR3(1)      <----------DOF2   gcagacttgggtggaagtaacggtaataatgataacggaaatggcggcggtggcggaggagacggcggcggcgataactctgatgattcttctttcgatt  16883000  Previous    Next  AGI:  At3g45880.1    Description:  similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63727.1); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347) Range:  from: 16879899    to: 16882533    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g45890.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23851.1); contains InterPro domain Protein of unknown function DUF647 (InterPro:IPR006968) Range:  from: 16882666    to: 16885296    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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