Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <-----------GT1                                                                                --------->AHL20(2)                                                                                --------->ATHB51                                                                                <---------ICU4                                                                                <---------AHL20(2)                                                                               --------->ICU4                                                          <---------AHL20(2)   <---------YAB1                                                          --------->AHL20(2) <---------ICU4                                                         <---------AHL20(2) --------->AHL20(2)   <---                                                      --------->AHL20(1)    --------->ICU4      -----              --------->ANAC46                        --------->AHL20(2)    <---------ATHB12   <-----              --------->REM1(1)                       <---------AHL20(2)    <---------AHL20(2)<------            <-----------GT1                   ----------->GT1 <-----------GT1--------->YAB1   ------- ------->AtLEC2                  <----------DOF2     --------->AHL20(2)     <---------ATHB51 --------   gatgcaaatgagttttacatcacttatataagtgactttagaattggtgagtgaaaaaaattatttacatcgtttcaaataattatttacatcgattata  16877800                                                                     --------->YAB1                                                                     <---------ICU4                                                                     -------->HAHB4                                   --------->ANAC46              <---------AHL20(2) ------AHL20(2)                    <----------ID1                --------->AHL20(2) ---->YAB1                   --------->AHL20(2)                  --------->AHL20(1)                <- ----YAB1     <---------ANAC58     --------->ANAC58             --------->AHL20(2)                 -- ---AHL20(2)  <---------ANAC58     --------->ANAC58     --------->At4g35610                        -- -->AHL20(2)<---------YAB1 --------->TOE2(3)         --------->MYB46(3)                            -- ->YAB1--------->YAB1     --------->YAB1           <-----------GT1  <---------YAB1     --------->ANAC55(2)   atattagaaacatgatgcttaactcttaacataaattacgccaagaccaatttgaaccatctgaaaattaattatagcattctatatttatgtattcgtt  16877900                                                                        <---------YAB1           ------->TEIL   <---------AHL20(2)  <---------AHL20(2)      --------->YAB1               --          <---------CCA1(2)                   <---------AHL20(1)  <---------AHL20(2)               <-        --------->ANAC55(2)                   --------->AHL20(2) --------->AHL20(1)              ---- --------HSFB2a(2)       --------->AHL20(2)--------->YAB1       <---------AHL20(2)      <------ZmHOX2a(1) ------->HSFB2a(2)    --------->YAB1       <--------HAHB4--------->GLK1(2)            <---------TOE1(3) ---->ZmHOX2a(1)   <----------DOF2        <---------YAB1<---------GLK1(2)    --------->YAB1     <---- ------->LBD16<----------DOF2   <-----------GT1<---------AHL20(2)<---------AHL20(1)   <---------TOE2(3)   cctcgaatttatgtatctttacttttataaaattttaccatactataattaatttttagattctatatatatttataaatgaaaatttaaggaaattagt  16878000                       <------ZmHOX2a(2)                               --------->MYB52(2)            ----------->GT1                                          <---------MYB52(1)            <------NtERF2                                      --------->ATHB12           --------->LBD16                                     <---------ICU4          <---------ANAC58                                    --------->ICU4          <---------ANAC58                                    <---------YAB1         <---------LBD16 --------->WOX13(1)              <---------TGA2(1) ------->ICU4        <------ZmHOX2a(1)                   --------->TGA2(1) --------YAB1 <--------P --------->KAN4(2)          --------->YAB1 <---------MYB46(3)      <------ZmHOX2a(2) ----->YAB1<---------MYB46(3)          <---------ANAC58  --------->bZIP60(1)           <---------TOE1(2) -----ZAT6<---------ANAC46             <---------ANAC58  <---------bZIP60(1) ----------->RAV1(2)   gataatggaatggcgggtaaataggatcaatcccaatgcatgcttgtgtccgaagcatgatgtcatcatttgttagttcccctgtctcgttcgatcaaaa  16878100                                                           ------>MYB46(1)                                                           ------>MYB83                *TSS<---------HSFB2a(2)                                             --------->AHL20(2)               --------->YAB1     ----                                             <---------AHL20(2)           <---------ANAC58 --------->HSFB2a(2)       >>>>>>>>>WRKY18       --------->WOX13(1)           <---------ALFIN1<---------ANAC58 --------->LBD16      ----------->HVH21    ------------>CBF --------->AHL20(2)       ----------->RAV1(2) <---------LBD16  ------->MYC3       ---------->DOF2      <---------ARR11(3)     ----------->HVH21  <----------DOF2 <  <-------MYC3     <-------TEIL<---------ATHB12          --------->MYB46(3)<----------DOF2<---------LBD16   aacacgttttgacagaagagattcaaagtgacaatcagtttcaagatttaattctcttacccactctctcaccctggctttcataactttctccgggaat  16878200                                                                  <-------MYC3                                                                  <-------MYC2                                                                  ------->PIF5                                                                  ------->MYC3                                                                  <-------PIF5                                                                  ------->MYC2                                                                 --------->O2                                                                 <---------O2------>ZmHOX2a(2)                                                                 --------->TGA1a                                                                 <---------TGA1a                                                                 ====================================                                                                 <---------ANAC58                                                                 <---------bZIP60(2)                                                                 <---------ANAC58                                                                 --------->ANAC55(2)                                      <---------ANAC46           <---------ANAC55(2)                                    --------->SPL7              ------------>OsbHLH66                                    <---------ZAT14         --------->At4g35610                                    --------->ZAT18      ---------->DOF2     ========================                                  <---------ZAT14        ==================bZIP_DOF                                  <---------SPL7      <------NtERF2--------->ALFIN1                       >>>>>>>>>>>>>>>>>LFY         <---------ANAC58      --------->ATHB12          ---------->DOF2   <---------ATHB12        --------->ALFIN1     --------->ICU4        <------NtERF2  <<<<<<<<<<<<<<<<<LFY         <---------ANAC58     <---------YAB1       --------->LBD16------->GAMYB --------->ZAT14 <---------ANAC46 <------NtERF2                  <      --------->LBD16 --------->ANAC46----------->GT1 --------->ALFIN1<---------ANAC46          -----     <---------LBD16  --------->RAP2.6(2)          <-----------------------TaNAC69(2)        -------- ----->YAB1           --------->DEAR3(1)   ---------->DOF2  <---------At4g35610             <-------- ---------GLK1(2)    --------->MYB46(3)    ================================bZIP_DOF         <--------   aagaatcgccggaaaagaagaaaaccgccaatggagagtacggtggaaagagaggcgtggaaagctcacgtggcgatgatcggtgtgcaattgttcaacg  16878300       <---------bZIP60(1)       --------->bZIP60(1)   --------->ARR11(3)  --------->GLK1(1)  <---------GLK1(1) <---------ARR11(3) --------->ARR14(2) --------->ARR11(3)                                                     <---------YAB1 <---------ARR14(2)                                                    ------>ZmHOX2a(2) ===MYC_MYB                                   ------>MYB46(1)          ============================== ======HOX2a_HOX2a                            -------->P             <---------ARR11(3) ------ZmHOX2a(1)                             ------>MYB83       <---------ANAC58 -->GAMYB                          <------MYB46(1)               --------->ANAC55(2) ->MYB52(1)                        <------MYB83                  <---------ANAC46 -WRKY38(1)          --------->ALFIN1<---------ANAC46            <---------ANAC58 -WRKY12         ---------->DOF2  <---------AtMYB61           <----------DOF2                    ----   gaggatatcatgtcattaccaaagtggctctcaacgttggtgtaaaccaacttgtcttctgtgtctttcgtgatctcattgctctctccattcttgctcc  16878400           --------->LBD16          --------->ANAC55(2)       <---------ARR14(2)       --------->ARR14(2)      <---------CCA1(2)                                                          --------->At5g28300     ----------->ARR10                                               <---------TOE2(2)  <---------ANAC46               <----------DOF2                     <---------TOE1(2)  <---------ANAC58         <---------ARR11(3)                      <---------ANAC58  <---------ANAC58         --------->ARR14(3)            <----------DOF2        ----------->GT1 ===HOX2a_HOX2a            --------->ARR11(3) <---------GLK1(2)    <---------ANAC58 -->ZmHOX2a(1)      <----------ID1       ------------>AtMYB77 <<<<<<<<<TBF1<-----------GT1          -   tcttgcttatatccgtgataagagaacaagacctcctttgaatcgacagtttctcttagctttcttcttccttggtttaacagggtaattcaagttttct  16878500                                <---------YAB1                           --------->At4g35610                              <---------ICU4                     <------MYB46(1)                              --------->YAB1                <---------CCA1(1)                             <---------ATHB12               <---------RVE1(1)                           --------->WOX13(1)               <---------GLK1(1)                     --------->ATHB12                      <---------ARR11(3)                     <---------ICU4                        --------->ARR11(3)        --------->ATHB12                    --------->ICU4                        <------ZmHOX2a(1)<----------DOF2                    <---------YAB1                    --------->ICU4     <---------At4g35610      --------->GLK1(2)  <------------------ATHB9   --------->ATHB12 ----------------------->TaNAC69(2)     <---------GLK1(2) <---------WOX13(1)        <---------ANAC46<------MYB83       <---------YAB1  < ------->P <---------MYB52(1)--------->ICU4   <---------AtMYB61 --------->MYB59     ------>ZmHOX2a(1)   tctaccagtttctgttatcttcatgattgcaatcatcacagtgatgttttggtgtgattaggatatttggtaatcagcttttgttcctcattggtctgaa  16878600                                           <---------MYB52(1)                                          --------->LBD16                                 <-----------HVH21                                --------->DEAR3(1)                   <---------At4g35610   --------->LBD16                --------->At4g35610     <---------LBD16                      ---------->DOF2                <---------At4g35610  <---------ARR14(2)                   <---------ANAC46     ------>MYB46(1)          --------->At4g35610                    <---------ICU4                 <     ------>MYB83  --------->At4g35610<------ZmHOX2a(2)             <---------YAB1     <------ZmHOX2a(2)    --------->WOX13(1)        <---------At4g35610  <----------DOF2  --------->ICU4    --------->ARR14(2)   --------->AtMYB61  ------>NtERF2  --------->ARR14(2)  <---------ICU4   ----------->GT1     <------ -----------GT1<-----------RAV1(1)<------NtERF2 <-----------GT1   --------->YAB1      <---------ARR14(2)   ttacaccaatccaacttatgctgcagccattcagccgtcgatcccggtttttactttcatcttggctctcattatggggtaaagactcgatccagtcttt  16878700  Previous    Next  AGI:  At3g45870.1    Description:  integral membrane family protein / nodulin MtN21-related. similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G19185.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63731.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 16878187    to: 16879911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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