Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------->GT1                                 <---------TOE2(3)                      <---------AHL20(2)                           <---------AHL20(2)                   >>>>>>>>>>WRKY43                           --------->AHL20(2)                   >>>>>>>>>>WRKY38                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     >>>>>>>>>>WRKY26                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       >>>>>>>>>>WRKY6          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  >>>>>>>>>>WRKY11          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <---------WRKY18(1)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------AHL20(2) --------->WRKY45    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->AHL20(2) --------->WRKY12          --------->DAG2  ---------->DOF2   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->WRKY38(1)     ---------->DOF2  xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1           <---------At4g35610 <---------YAB1------ ------->GT1      --------->ICU4 <---------YAB1      ---------->ID1     --------->AHL20(2)    -------   tgtagaaagagaagagagccaatatgagtttaaatatggttatagtttaatttttgtttttttagttgaccaaaataaatgtttttataaaaaggcaaaa  16851600                             ----------------->PIF3(1)                            ----------------------->TaNAC69(2)                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58 --------->O2                      <---------ZAT14<------ZmHOX2a(1)             --------->O2  --------->ZAT18             <---------O2 --------->ALFIN1 <---------CCA1(2)                                      <-- --->DAG2    --------->bZIP60(1) <---------O2          <---------CCA1(2) --------->ZAT18       ------ --->DOF2    <---------bZIP60(1) --------->O2       --------->HSFB2a(2)  <---------ZAT18      -------   gtaagtttgaaaacgacgtcgtagtagagtgtgccacgaggactcgtctctcttctcgtatcaactcgctccgagtcgactcaaaacataaactcggacc  16851700                                                                                                    -                                                                                                <----                                                                                                <----                                                                                             <-------                                   <---------ANAC58                                        <---------     <---------ALFIN1              <---------ANAC58--------->DEAR3(1)                    <----------DOF2 -------CCA1(2)         <---------DAG2           <---------At5g28300                    <---------ANAC58 --->DEAR3(2)           <----------DOF2---------->ID1         ---------->ID1            <---------ANAC58 -->SPL7    <----------DOF2     <-----------GT1 <-----------GT1  ------>ZmHOX2a(1) <-----------RAV1(1)   gtctcttccactctctttcccaaaaacttttttttttccttgttgtaatttcaccgtcttcttcgtcctactatgccctaagtctctgtggctttaccct  16851800                                                            ---------->ID1                                                  <-----------HVH21                                                  <-----------TGA1                                                 --------->ANAC58                                                 --------->ANAC46                                                 <---------O2                                                 --------->ANAC58                                                 ================================MYC_MYB                                ------>NtERF2    =================================MYC_MYB                               <---------ANAC46  --------->TGA1a                             --------->MYB52(1)  <---------TGA1a                          <---------At4g35610    --------->bZIP60(2)     <----------DOF2      --------->At4g35610    --------->ANAC55(1) --------->ID1   --------->TOE2(3)   <---------YAB1--------->TGA2(2)                        --------- -----DAG2 --------->ANAC46 ----------->HVH21   <-----------STF1                       <-----------HVH21 ------DOF2--------->ANAC55(2)--------->RAP2.6(3)--------->O2             ------->GAMYB<-----------TGA1 ----------AGL1  --------->TOE1(3)  ----------------------->TaNAC69(2)  -------->P    --------->ANAC46 --GT1   <-----------GT1 --------->GLK1(2)     <---------ALFIN1       --------->MYB46(3)----------->HVH21   ttttcgtcttttcacataaccttcactaatctgacggctatgcttccttccacgtcaccttcgtcttcttcatcaaccctctctctctccgtcaccgtct  16851900                                                                <---------At4g35610                                                                <---------CCA1(2)                                                             <-------TEIL                                                           <---------GLK1(2)                                   <---------ARR14(2)      <---------ARR14(2)             ------>ZmHOX2a(1)        --------------------->WRI1 --------->ARR14(2)      --------->ARR14(2)             --------->HSFB2a(2)        <----------DOF2     <---------AHL20(2)        ------>ZmHOX2a(1)         <-----------GT1     ------>ZmHOX2a(1) <---------MYB52(1)         <---------ARR14(2)        <----------DOF2    <---------ALFIN1  <----------DOF2             --------->ARR14(2)     ---------->ID1   <---------HSFB2a(2)  ------>ZmHOX2a(1)  ----------->GT1             <---------GLK1(1)     <------------------------ANAC81 >DEAR3(1)  <---------TOE2(3) <-----------GT1    --------->GLK1(1)    <----------DOF2  ------>ZmHOX2a(1)   tctcctcctcctttaagtttatcgcgttatttatacggttccttctctagggtttcctccagattcatctctcttttccttttttcttcctcctcgaaca  16852000                                                                              --------->ICU4                                                                              <---------YAB1                                                                            --------->YAB1                            ---------->DOF2                        <-------TEIL<---------ICU4                          ------>ZmHOX2a(1)                    <---------TOE1(3)           --------->GLK1(2)                 <---------At4g35610                    ------------>CBF   <------ZmHOX2a(2)           <---------At4g35610              ------------>CBF   <---------TOE2(3)           --------->ARR11(3)           --------->At4g35610    ------------>CBF    ----------->HVH21    <---------ATHB12<---------ARR11(3)   acttcttctattttgctgaagcagagtcctaaaagcttcaattttgttcaattttggtgacaattaaggtacttccgatcataattcatcgaaaatcttt  16852100                    ---------->DOF2                                                                <-                 ----------->GT1                                                                  <--           <---------------AtSPL3                                                     <---------ANAC58         <------------CBF                                        <---------AHL20(2)   <---------ANAC58      ------------>CBF               <---------YAB1             <---------YAB1        <---------ANAC46  <---------YAB1 <---------ZAT6   <-----------GT1         <---------YAB1          <----------DOF2 <--   gattttgattcaattggtactgtaaagtttttgttttttcttattcgattttctaaagttttgatttttattttgtgttctgggctttgcgtttgtgttt  16852200                                       <---------ANAC46                                     --------->ALFIN1                             <---------ANAC58                                      <---------TOE1(3)           --------->TOE1(2) <---------ANAC46                                  --------->TOE2(3)          --------->ATHB12   <---------ANAC58                      <---------HSFB2a(2)          --------->YAB1    --------->ATHB12                     <------ZmHOX2a(2) <---------TOE2(3)   ---------->DOF2        <---------MYB52(1)                  <---------ANAC58 <-----------TGA1 --------ZAT6            <-------GAMYB<---------LBD16         <---------ANAC58<---------bZIP60(1) -------TOE2(3)         <-----------RAV1(1)          --------->ALFIN1       --------->MYB52(1)      - -------TOE1(3)<------ZmHOX2a(1)   <------------CBF<---------ANAC46--------->HSFB2a(2)            ---   agggttaaagaatcataggactgtttctgttgagtggaattgggggttttgttatgtggtgatggcgatcgagaagagtaacgtcaaggtttcgaggttt  16852300                                                                 <---------MYB46(3)       --------->ZAT14                                           ----------->GT1       <---------ZAT14                             --------->ANAC58          <---------YAB1     --------->ZAT14                               ----------->GT1        --------->ICU4            -     <---------ZAT18                               <---------ANAC55(2)   <---------TOE2(3)        --- ----->ZmHOX2a(2)                                  --------->ANAC58     --------->YAB1            <-- ------>ARR11(3)    <---------ZAT6            ---------->DOF2   --------->ALFIN1       <------ZmHOX2a(1)   gatctagagtactctcatggtagtggtgattctatgtcaagttacgaagaaagacgtaaaaactcagtggtgaataatgttgattcggaggatgaagatg  16852400                                    --------->ARR11(3)                                <---------At4g35610                               <---------YAB1               <---------ARR14(2)                            --------->ARR14(2)              --------->ARR14(2)                            <---------ARR14(2)             <------NtERF2                            --------->GLK1(2)  <---------ANAC46                        <-----------RAV1(2)    <---------ANAC58     --------->At4g35610         <----                       <---------At4g35610     <---------ANAC58     <---------At4g35610         <----    <---------YAB1 --------->HSFB2a(2)   --------->ATHB12 --------->LBD16                       <---- -------->ARR11(3) <---------HSFB2a(2)  <---------YAB1   <---------ANAC46                       <---- ------>ICU4      <---------LBD16 <---------YAB1        <---------LBD16                        ------ -------YAB1 <---------YAB1<---------GLK1(2)   <---------AtLEC2 <-----------RAV1(1)        ----------   atgattttgatgaagatgattctggagcaggttctgatgattttgatttgcttgaattggcggaaactggtgctgagttttgtcaagttgggaatgttac  16852500  Previous    Next  AGI:  At3g45820.1    Description:  unknown protein Range:  from: 16851015    to: 16851968    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g45830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21749.1); similar to Nuclear factor related to kappa-B-binding protein , related [Medicago truncatula] (GB:ABD32307.2); contains domain PTHR13052 (PTHR13052) Range:  from: 16852262    to: 16856526    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version