Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                <----              <---------MYB46(3)                                                                -----      <---------AHL20(2)                                                                    <--------     --------->AHL20(2)                                                               <---------AHL20(2)  --------->YAB1                                                                     --------->AHL20(1) <---------YAB1<-------GAMYB                                                         <---------AHL20(1) --->MYB83<-----------RAV1(1)                                                      --------->ARR11(3) --->MYB46(1) <------MYB83                       --------->ZAT18                   <---------ARR11(3) ------->RAV1(1)            <-----------GT1  <---------ICU4                  --------->YAB1<---------TOE2(3) --->MYB46(3) <------MYB46(1)               <---------ATHB12--------->AHL20(2)     <---------AHL20(1)   aacatcataaaattgttggttaagtcatataaaccattcgtttccaataagtgccatagaaattgaatattgagcatagtcagaatatatatttatgttt  16827500                                                                                             <-------                                                                                             <-------                                                                                             --------                        <---------ARR14(2)               ----------->GT1                     <------- ---MYB83               <---------KAN4(2)     --------->YAB1                   --------->ANAC46 ---MYB46(1)            --------->ARR14(2)    <---------ICU4                 <-----------GT1 <------- -----AtMYB61        ----------->GT1         --------->ICU4                --------->CCA1(2) <------- ---->MYB59    ---------->DOF2<---------TOE1(3)    --------->ANAC58       >>>>>>>>>GATA-1  <--------- -YAB1     ----------->HVH21  <---------TOE2(3)    --------->ANAC58     ----------->GT1 <---------ZAT6   ggtctggttttgtttgacaaagagagtatattcaggtttataatctaattatcaagacagagttatacagaagatagataaacgatactagtgttacgtt  16827600 --ANAC58                         ------->MYC3 --ANAC55(2)                      <-------MYC3 ->ANAC55(2)                     --------->O2                                     <---------REM1(1) --ANAC58                        <---------O2                                  ----------->HVH21 --ANAC46                   --------->ANAC58                      <------ZmHOX2a(2)          -------- --ANAC55(1)           ---------->DOF2   --------->YAB1          --------->ARR11(3)          -------- --GT1       ---------->DOF2--------->ANAC58    --------->TOE1(2)<---------ARR11(3)        <<<<<<<ZML2   tctatacaatcttttgaaagtaaacaaaagaagccatgtggaatcaaaaacattcgaagcatgggaagatcaaataatccagtgatggagctagaacgga  16827700                <---------MYB59                                   ------>ZmHOX2a(1)                --------->TOE2(3)                                --------------->AGL15        <---------ICU4                    --------->GLK1(2)      --------->TOE2(3)        --------->YAB1                   <---------GLK1(2)      ----------------->AG     ---------->DOF2       --------->ICU4                 --------->HSFB2a(2)     <-----------GT1         <---------HSFB2a(2)       <---------ATHB12               --------->HSFC1(1)  <---------AHL20(1)          --------->HSFB2a(2)     --------->WOX13(1)               <---------HSFB2a(2) <---------AHL20(2)         <---------LBD16   <---------ATHB12           <-----------GT1         --------->YAB1                <---------LBD16 ->ANAC58       --------->TOE1(3)     <---------HSFC1(1)  --------->AHL20(2)  ---------->DOF2 ->ANAC58 <---------YAB1     <---------AHL20(2)      <---------YAB1        ----------->TBP ----------   actaaatcaatcatgaaacctaaatagttttttaatctttctagaatctcttcttatcaaaaaatttccttatttgtataaaaagcctcgggaaagttaa  16827800                                                            <------ZmHOX2a(1)                                                            --------->YAB1                                                   *TSS   <---------TOE1(2) <---------HSFB2a(2)                   ------>ZmHOX2a(1)           ----------->GT1              --------->HSFB2a(2) ->GT1            --------->TOE2(3)           ----------->GT1   --------->GLK1(2)            <-------   cttctcatcccaaactcattcctcagtttatctctcgactagagagtgaaggaaaaatcgaaggataatctgtttcttccagcacaagttaacttgcaag  16827900                                                                    <---------AHL20(2)                                                                --------->AHL20(2)                 <-                              <---------ZAT18                   <---------AHL20(2)                 <-                         <---------ANAC58                  <-------TEIL                       <------     <-----------GT1     <---------ANAC58  <-----------------AGL3   --------->AHL20(2)        <------ --AtLEC2          <-----------GT1<----------DOF2    <------ZmHOX2a(1)                  <----------DOF2   gtagttttctcccttcgatttatactgtcttgctcactttcttaggctatttttaggacgattcatttttttaatttgtatgttattcatctttttaggg  16828000                                                                                                -----                                                                                               <-----                                                                                               ------                                                       <---------GLK1(1)                      <------                                                      <---------ARR11(3)                      <------    <-----------GT1                              <---------ANAC46                         <---------ANAC58  <-----------HVH21                            --------->ZAT14                            <---------ANAC58 --------ANAC58                        <---------AHL20(2)    --------->AHL20(2)          --------->STY1(2) --------ANAC58 <----------DOF2        --------->AHL20(2)<---------YAB1                  <---------STY1(2) ---TOE1(3)   ------>NtERF2  ----------->GT1   <---------ZAT14<---------AHL20(2)  <---------STY1(2) ---TOE2(3) <---------RAP2.6(2)    --------->AHL20(2) --------->ARR11(3)          --------->STY1(2)   ttcttgtcacattttcggccttaatttgtatgtgtaaaaatataaatagtgaagtagatatcattttatatcgtctagcactctagctactagcttgatc  16828100                         <---------AtLEC2                   <---------AHL20(2)                             <-------GAMYB                   --------->AHL20(2)                            --------->MYB55(2)                   --------->ATHB12                              --------->MYB52(2)                  <---------AHL20(1)                             --------->MYB111(1)                  --------->AHL20(2)                             --------->MYB111(2)          <---------AHL20(2)      <---------DAG2                 --------->MYB46(2)    ----------->GT1--------->ATHB51                              <---------MYB46(3) ->ZmHOX2a(2)     <---------AHL20(2)                   <-----------HVH21                 ------->GAMYB ----At4g35610 --------->AHL20(2) <----------DOF2     --------->ANAC46                 --------->At4g35610 --->At4g35610--------->AHL20(2)<---------At4g35610   --------->bZIP60(2)              <---------At4g35610 ---ARR11(3)  <---------AHL20(2)--------->At4g35610 <---------ALFIN1                  --------->MYB52(1) ---AGP1  --------->AHL20(2)<-----------HVH21---------->DOF2    <--------P       <---------ARR11(3) <   tgaaactagtatatatataaattatttgaatgtcagcttttttttgtgaaagtcacacatcacatggtagttgcatatttcaagaactcaactgaattcg  16828200                                            <---------AHL20(2)                                            --------->AHL20(2)                             <---------ARR11(3)                  <-----------GT1                      --------->YAB1       <---------AHL20(1)   <-----------GT1                 <---------YAB1            --------->AHL20(2)--------->ARR11(3)                 --------->ICU4    ------->TEIL              <---------GLK1(2)               <---------ICU4--------->ARR11(1)       --------->AHL20(2)           <---------AHL20(2)               --------->YAB1--------->ARR11(3) --------->AHL20(2)                 --------->AHL20(2)              <---------ATHB12  <---------ANAC55(2)  --------->YAB1      <---------At5g28300    <----            --------->WOX13(1)--------->CCA1(2) <---------AHL20(2)  ------>ZmHOX2a(1)       <--------        <-----------GT1  ---------->DOF2   <---------AHL20(2)<---------ARR11(3)    --------->AHL20(1) ---------AHL20(2)<---------ICU4--------->ANAC55(2) --------->AHL20(2)  <-----------GT1<-----------GT1   atttaaaatttctccaatcataattcataaagatatgtatttcaatttttttaaataaaaatagattttcctatttaccatgaaattttttactcttttt  16828300                        <-----------GT1                                                     <--------                   ----------->GT1                                   --------->ANAC58      <---------ARR11(3)          --------->AHL20(2)               <---------------AGL15     --------->ANAC58      --------->ARR11(3)  ---------->ID1   <---------ZAT6       <-------TEIL        --------->AHL20(2)     <----------ID1 -----AHL20(2)   ----------->GT1   ---------->DOF2      ----------->GT1    ----------->GT1 <---------GLK1(2) --DOF2   <---------AHL20(2)    <-----------GT1<---------ANAC46 <----------ID1   ---------->DOF2   atttgttctcatataaatagagtgataaactattttacaaagttcatttatgtggaaattgataaaatgacaagaacatgaaaaaaagacaaagattttt  16828400  Previous    Next  AGI:  At3g45780.1    Description:  PHOT1 (phototropin 1); kinase. Identical to Phototropin-1 (PHOT1) [Arabidopsis Thaliana] (GB:O48963); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.2); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.1); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO21758.1); similar to phototropin [Phaseolus vulgaris] (GB:BAD89967.1); similar to phototropin-1 [Solanum lycopersicum] (GB:ABN42185.2); contains InterPro domain PAS fold-3 (InterP Range:  from: 16827851    to: 16835195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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