Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ANAC46                  --------->AHL20(2)                                         --------->ANAC58                ----------->GT1                                              --------->ANAC58        --------->LBD16                <----------DOF2                      --------->SPL7     ------        <---------At4g35610<-------TEIL------>ZmHOX2a(1)            ---------->DOF2            <----- ---------At4g35610       --------->CCA1(2)     <------ZmHOX2a(1) ---------->DOF2     <------ZmHOX2a(1) --AHL20(2)    <---------TOE2(3)   <---------ARR14(2)--------->ANAC55(2)   <---------ALFIN1  <------- >AHL20(2)    ---------->DOF2      --------->ARR14(2)<---------ANAC55(2)  <---------SPL7    <--------   tcagatgttccgctactaaagttaatagatacatccaaatccttttgtgaggaaaacgtattcatcgcaaaagagccatacgcctcaaggaccgggctgc  16815300            --------------->AGL15          <---------------AGL15            ===============================================MADS_MADS            <---------MYB59                --------------->AGL15         <<<<<<<<<GT-1                    <-----------------AGL3    <---------YAB1                        ===========================================================  <---------At4g35610       --------->AHL20(2) --->At4g35610------>MYB83 --------->AHL20(2) ----At4g35610------>MYB46(1)             <-----------------AGL2              ---------->DOF2 --DEAR3(1)--------->ANAC55(2)       --------->TOE2(3)                  ----------->GT1 -ZAT2   <-----------GT1   <---------AHL20(2)       --------->ARR11(3) <---------TOE2(3)          <--   tctcttctgatttacctaataaacaaaaaataaataaaacctctactgaatatggatattggtcgagcttaataagataaaaaagactacaagacttata  16815400                                                                    --------->ARR14(2)        --------->ARR11(3)                                          <---------ARR14(2)        <---------ARR11(3)                                     --------->At4g35610       --------->RVE1(1)                                       <---------At4g35610       --------->CCA1(1)                                     --------->YAB1        --------->At4g35610 --------------->AGL15             <-----------GT1     --------->YAB1         ---------->DOF2 ===============================================================MADS_MADS  <---------ETT(2) ================MADS_MADS <---------TOE2(3)     ------>ZmHOX2a(1) <---------ARR14(2) ---------GT1              <---------TOE1(3)    --------------->AGL15--------->MYB52(1)   ttaccaaaaatatctatagccatagcattgaggtttttgaccaattccttcctagtattgtaatcagcagaaaccggtcgaaaagagctgtaggcatcat  16815500                           <-----------GT1                                                        ---             <---------ARR11(3)                                                                  ----             --------->ARR11(3) <---------YAB1                                                   ----    <---------DAG2      --------->CCA1(2) --------->ARR11(3)                <----------DOF2  <<<<<<<GRF7    --------->TOE2(3)  <---------ARR11(3) <---------ARR11(3)       <---------ZAT18         ----------    --------->TOE1(3)  --------->ARR11(3)<---------CCA1(2)        <---------ZAT6<----------DOF2  <---   ctaataccttatcaaggtctagtaagatataactatcaatgttatatctcttagatgctatggacatagtgttcttcactttcttttgaatccctgacat  16815600           --------->RAP2.6(2)        --------->ANAC46        --------->ANAC58                                  <---------ARR11(3)  --------->MYB52(1)                                      --------->ARR11(3) ------------>AGL15                                 --------->ANAC58                         <------- ------------->AGL2                                 --------->ANAC58                        --------- ------------->AGL3                          --------->ZAT18                             <-----------GT1 ->HVH21--------->ANAC58---------->DOF2      --------->ZAT14                ---------->DOF2 --------- ----TEIL  ----------->RAV1(1)----------->GT1<---------ZAT18    <------ZmHOX2a(1)  ----------->GT1 --   ccattaacagaagccacaaaaaacaaaaaagattgcaaaatttgtagtgaacacaaacaatatctaggaaatttcagccaaagagttgtataaaccttta  16815700                                                                                                    -                                                                                                 ----                  <---------ZAT2                                                ----------->GT1 <---- ---DOF2          --------->ZAT2                                              --------------------->WRI1 >TOE1(3)       <---------ALFIN1                                           --------->AHL20(2)  ------ >TOE2(3)<----------DOF2             <-------TEIL   --------->ANAC58  ------------>CBF        ------- ------->ANAC46--------->LBD16  ---------->DOF2     --------->ANAC58--------->TOE1(2)         <------   ctcgaaacattcttttccccagcttgattttttcgaaagtccatagtacctctcaagcagagctattaaacctgcaataacatagaaaaaatcgaagatt  16815800                                                                                          --------->MYB52(1)                                                                                        ------>ZmHOX2a(2)                                                                                        =============           <---------ARR14(2)                      <---------ANAC58                    ==============           --------->ARR14(2)                      <---------ANAC58                    --------->CCA1(2) -------->ALFIN1                                  <-------TEIL                         <------ZmHOX2a(2) ----->ATHB12                                   <---------ARR14(2)                    <---------ARR11(3) ---TEIL>>>>>>>>>TBF1                           --------->ARR14(2)                    --------->AGP1 --->GLK1(2)                                ----------------->AG <---------AHL20(2)   --------->ARR11(3) -->ARR14(2)               <---------ZAT6   ----------------->AGL1                    <---------AGP1 ---ARR14(2)        --------->MYB46(3)--------->ARR11(3)  --------->GLK1(2)           <-----------ARR10   cagtggggaagaagaactgtgaacaactagagtcaaaatagaacttgccaaattcgtgagaacctattttttttttttatcaaactaagatctaagggag  16815900                                                                                            <--------                                                                                            <--------                                                                                          <---------RVE1(1)                                                                                          <---------CCA1(1)                                                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                             --------->CCA1(2)                                                  <------ZmHOX2a(2)         --------->ARR14(2)    ---                       ------------>CBF          --------->ARR14(2)         <---------ARR14(2)    ---            <------ZmHOX2a(1)      --------->CCA1(2)                        --------->ARR11(3)    <--            ==============HOX2a_HOX2a     --------->ARR14(2)                --------->ARR11(1)    <--          <---------TOE2(3) <------------CBF     <---------ARR11(3)    <------ZmHOX2a(2) <---------ARR14(2)    <---------ZAT18<------ZmHOX2a(2)      <---------ARR14(2)          <---------ARR11(3) --------->ARR11(3) ==================HOX2a_HOX2a    --------->ARR14(2)                  --------->ARR11(3) <---------ARR11(3) ==================HOX2a_HOX2a    <---------ARR14(2)      <---------ETT(2)  <---------ARR11(3) <-----   ttatagagtacttaggatgagatcaaacaatattgggatatggagaaccgagatcgacggtcgagatgagaagatcaagatatggcaagaagatattatt  16816000                                                                   <---------YAB1                                                                  <---------TOE2(3)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                   <---------AHL20(1)   ----------->GT1                                 --------->AHL20(1) -AHL20(2)    <---------YAB1             <---------ARR11(3)<---------AHL20(2) -YAB1    --------->TOE2(3)           --------->TOE2(3)--------->AHL20(2) ------>HSFB2a(2)                   <---------TOE2(3) <---------AHL20(2) ------>HSFC1(1)                   <-----------GT1 --------->AHL20(2) -------HSFC1(1)<------------CBF --------->AHL20(2)<---------AHL20(2)     --------->TOE2(3) -------HSFB2a(2)           <------ZmHOX2a(1)     --------->AHL20(2)   <---------CCA1(2) ----YAB1----------->GT1  <---------TOE2(3)--------->ZAT6  <-----------GT1--------->YAB1       ------   ctagaaggtaaatgttaatattgaagtttaggaaatttaacattatctctaaatatattatttacatttatgtttatcttaatctctatataagagaatg  16816100                               <---------YAB1                              --------->AHL20(2)                              <---------AHL20(2)                              <---------AHL20(1)         <---------YAB1      --------->YAB1 <---------ATHB51 <---------YAB1                                                   ---------->DOF2 <---------AHL20(2)    --------->GLK1(2)                  <----------DOF2 --------->AHL20(2) ----->GT1  <---------YAB1  <---------YAB1      <----------DOF2           <---------AHL20(2)   taaattattctattattcttatgagagtctattataattctttctaaacacttttgtgttctttactctcatcaaatttatcaaacaaaggctcgatttt  16816200  Previous    Next  AGI:  At3g45760.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45750.1); similar to hypothetical protein OsJ_027139 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43656.1); similar to Os08g0559900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062505.1); contains domain PTHR12271:SF1 (PTHR12271:SF1); contains domain PTHR12271 (PTHR12271); contains domain SSF81301 (SSF81301) Range:  from: 16812981    to: 16815744    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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