Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------GLK1(1)                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                        <---------TOE2(3)                                                                 <---------ANAC46       <----------DOF2                                                                 <---------ANAC58   <----------DOF2                                              <---------ANAC58   <---------ANAC58  <---------ANAC58            <---------YAB1                <----------DOF2    ------>ZmHOX2a(2)     <---------ANAC58 <---------At4g35610                     <---------ANAC58  <---------ARR11(3)--------->ARR14(2) --------->At4g35610         <---------MYB46(3)     <---------AHL20(2) --------->MYB52(1)   <-------- --------->ZAT14            <---------MYB52(1)<---------ANAC58<----------DOF2<---------ARR14(2)  <--- <---------ZAT14           <-------GAMYB <---------ANAC58  --------->ARR11(3)--------->GLK1(2)   <---   ctctgcagacaagtctaattgtatgtctccgttgttgttcatagcttttcttgtttattttgatctttcgtgctaacgaaatctggctttctttcaagta  16775900                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                 ----                                    <---------WOX13(1)                                   xxxxxxxxxxxx                         <-----------------AGL2                                       --------->ARR11(3)       --------->YAB1    <-----------------AGL3   <---------AHL20(2)                  <---------ARR11(3)      <---------YAB1  <------MYB83 <---------ANAC58   --------->AHL20(2)              --------->ARR14(2)    <----------DOF2   <------MYB46(1)             --------->AHL20(2)                  <---------ARR14(2) -------AtSPL8      <---------WOX13(1)    --------->ICU4                             --------->CCA1(1) ------TOE1(1)    --------->ATHB12 <---------ANAC58   <---------AHL20(2)         xxxxxxxxxxxxxxxx>smallRNA(i) ------TOE2(1)   <---------YAB1 <---------TOE2(3)--------->AHL20(2) ---------->DOF2  --------->RVE1(1)   cgatgactttgataacaatgtgattggtctatttatggattgccatgactatttatttatatttatctgtaaaagtttaagagaaaaatatctgccaatt  16776000         <---------TOE2(3)        ---------->DOF2     --------->TOE2(3)                          -------->P   <---------AHL20(2)                          --------->MYB52(1) ---------ICU4                               <---------MYB52(2)<-----------GT1                    --- ------->ICU4                         <---------LBD16      <---------AHL20(2)                  ------ --------YAB1                    <------------CBF          --------->AHL20(2)             --------->ANAC58 ----->YAB1                   --------->ANAC55(2) <---------ICU4<-----------GT1           --------->ANAC58 xxxxxxxxxx>smallRNA(le3)     <---------ANAC55(2)--------->MYB46(3)           <---------------------WRI1   cataattcattaaagaaataagaaaaacaaataagtattgttcggaaactaaccattacatttttttaactcttaagtactacaagacgaacaaggaaaa  16776100                                                                                     --------->At4g35610                     --------->MYB46(3)                  <---------TOE2(3)    <---------GLK1(2)           ----------->GT1                            <---------YAB1          <---------ARR11(3)          ------>ZmHOX2a(2)                    --------->AHL20(2)             --------->ARR11(3)        --------->ARR14(2)                   ----------->GT1                <---------TOE2(3)        <---------ARR14(2)                  <---------TOE2(3)      ------->TEIL      <---------At4g35610 -------->GT1<---------MYB52(1)            ---------->DOF2   XXXXXXXXXXXXXXXXXXXX>MIR865-5P         - ------>MYB.PH3(1) <-----------GT1       <---------AHL20(2)  ------->TEIL   ----------->ARR10 -------   ctgttacactgatccgttatttaacgactctatctataactattttaaagtaaattactaatgaaactgaatctaactaagattttctgatgaaaaaaaa  16776200                                  ---------->DOF2  <---------YAB1                         ------>MYB46(1)    --------------------->WRI1           --------->DAG2 ---------->GT1          ------>MYB83----------->GT1         --------->YAB1     ---------->DOF2  >>>> --->DOF2    ---------->DOF2   ----------->TBP  ---------->ID1       <----------DOF2      ---------->DOF2   gaaggaaattttgaccaaagtcaaaccaagcttataaaaaggaaatttttgttctcatcgctatcagaaaacttttacagagaaaagcgagagaaagaag  16776300                                     --------->ANAC46                                     --------->AtLEC2                                    --------->WOX13(1)            ------>ZmHOX2a(1)                        <---------YAB1    --------->REM1(1)      --------->TOE2(3)                    <---------GLK1(1)--------->ANAC58 ===================HOX2a_HOX2a                    --------->GLK1(1)--------->ANAC58 ------>ZmHOX2a(2)        <---------WOX13(1)       <-----------HVH21    =============HOX2a_HOX2a >>>>>TBF1 <---------GLK1(2)<-------TEIL  --------->MYB46(3)------>ZmHOX2a(1)   <---------YAB1   aagaatggagattgattctgagatttctgattcatcgtcaagcaacaactcgatgatccctcctcttcctcaaaaccctattttgactgtgaaactctct  16776400                                                              <----------DOF2                                                           ------>NtERF2                                                          --------->ANAC58                        <---------HSFB2a(2)               --------->ANAC58                        --------->HSFB2a(2)              --------->SPL7                       <---------ANAC58               --------->ANAC58               <---------TOE2(1)                      --------->ANAC58               <---------TOE1(1)                   <-------TEIL               --------->ANAC46    --------->AHL20(2) --------->ANAC46              --------->SPL7     --------->TOE2(3) <---------REM1(2)   --------->KAN4(2)   <---------ANAC58        --------------->AtSPL3      >>>>>>>>>TBF1 <------ZmHOX2a(2)     <---------ANAC46   <---------------------WRI1    >>>>>>>>>TBF1               < <---------ATHB12 <---------bZIP60(2) ---------->DOF2<---------LBD16 >>>>>>>>>TBF1             ------   ccgatcattctccatgtacgacgttgctcgaagaacattaaaaagaagaaacgtacacggacgcctttgaagaagaagaagaagagtattagtagcagtg  16776500                                                           --------->ANAC46                     -----                                                      <---------MYB52(1)                   ----------                                                     --------->At5g28300                   <---------ANAC58                                         --------->HSFB2a(1)    <---------ANAC46 <---------GLK1(1)       --------->YAB1                    <---------HSFB2a(1) ----------->HVH21   --------->GLK1(1) <---------ARR11(1)          --------->LBD16     --------->DEAR3(1)             <---------ARR11(3) --------->GLK1(2)           ------>NtERF2       --------->AtMYB61              --------->ARR11(3)  < ------->TEIL               --------->ANAC46     <---------ALFIN1      ----------->GT1     <---------ANAC58 ---------ARR14(1)       <---------ARR14(2)     <---------MYB55(2)    ----------->GT1      <---------ANAC46 --->ALFIN1              --------->ARR14(2)     --------->MYB46(3)   <------ZmHOX2a(1)------>ZmHOX2a(1)   tcgaatctataatcggagtctcattcaaatccgcctctcagaaacattccaccaccgtaactcgcgacggaggagttaaaaagatttcctcttgggtgaa  16776600                      --------->MYB52(1)                     <---------SPL7           --------->HSFB2a(2)                      <---------ICU4           <---------HSFB2a(2)                   ---------->DOF2       <---------ANAC58                       --------->ANAC58       <---------ANAC58                  <----------ID1       <---------ANAC46    <---------MYB52(1) --------->ANAC58 <---------TOE2(3)  <---------ANAC58   --------->MYB52(1)                          ---------->DOF2 ---->GLK1(1)       <---------ANAC58   ------>MYB83--------->ICU4                --------->YAB1 ->GT1--------->MYB52(2)  <-------GAMYB------>MYB46(1)            --------->MYB52(1)   --------->ALFIN1 XXXXXXXXXXXXXXXXXXXXXMIR830* <---------ANAC46----------->GT1  --------->ANAC46 <------ZmHOX2a(2)  --   atctaggttacttggagaaggggcttacggttgtgtttacctagcgacaagtaaagatgacatatacaaaacagagagagcgatcaaaagtgctgatgtt  16776700                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                              --------->ARR14(2)                              <---------ARR11(3)                              --------->ARR11(3)                              <---------ARR14(2)                             <------ZmHOX2a(1)                            <---------HSFB2a(1)                        <---------RAP2.6(2)                            --------->HSFB2a(1)                       <---------At5g28300                            --------->HSFC1(2)                       <-----------GT1    <---------ANAC46        <---------HSFC1(2)          <---------ANAC58    <---------ANAC58--------->ANAC58                    <---------ANAC58               --------->ANAC58    <---------ANAC58--------->ANAC46                    --------->MYB52(2)             --------->ANAC46 -------->DOF2      --------->ANAC58                  <---------MYB52(1)               --------->ANAC58   ttaaaggcttggagtcttatgcacgaaggaaggatcttaagaagtttgcaatctccgttcgtgattcgttgttacggccatgaaattgcacgagaaggga  16776800  Previous    Next  AGI:  At3g45670.1    Description:  protein kinase-related. similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G46140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71000.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 16776305    to: 16777444    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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