Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->HSFC1(2)          --------->HSFB2a(1)          <---------HSFC1(2)        ---------->DOF2    ------>MYB46(1)    --------->MYB52(1)    ------>MYB83   <---------ALFIN1   --------->MYB55(1)  <---------MYB55(2)  --------->MYB46(3)                                     <---------ARR14(2)  <---------MYB111(1)                                    --------->ARR14(2)  <---------MYB111(2)   --------->LBD16         --------->ZAT14 ----->MYB83           --------->ANAC46         --------->ZAT18 ------->P<---------HSFB2a(1)                   <---------ZAT18 ----->MYB46(1)       <---------LBD16           <---------ZAT14                                   --- ------>DEAR3(1)    --------->ANAC46         ---------->DOF2    ---------->DOF2                   --- -------MYB46(2) --------->ZAT14    <---------HSFC1(2)   <---------ARR11(3)                       --- --->ANAC58      <---------ZAT18    --------->HSFC1(2)   --------->ARR11(3)                     ----- --->ANAC58  <-------TEIL         <---------GLK1(2)  --------->ZAT14--------->ARR11(3)   ------>ZmHOX2a(1)   cctacccaccgaaagttcgttcactccgcaaaaccagaagcttcaagtagagcactgaagaccctctaaagaaattgcacatctagtcttcctcttccaa  16766800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                -----                                                                                                -----                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                           --------->ANAC58                                                 <--------                           --------->ANAC58                                                 ---------                         --------->MYB52(1)                                                 ---------                        --------->TOE1(2)                                                   <--------    <---------AHL20(2) --------->MYB46(3)                                                   <--------    --------->AHL20(2) <---------MYB52(2)                    <---------ALFIN1              ---------- ------>ANAC58       --------->MYB52(1)        <---------TOE2(3)                          <---------TGA2(2) ------>ANAC46     --------->MYB46(3)   --------->YAB1       --------->AtMYB61           ----------->TGA1 ------>ANAC58     <---------MYB52(2)<----------DOF2     --------->SPL7          --------->YAB1 ----- ---->MYB52(1)   <-----------GT1 <----------DOF2  ---------->DOF2  ---------->DOF2     <---------ICU4   acgaaattaaactcagatttaacaaacgaacgaaactttctttcatatgaaggaaagcgtccaccattccaaagtagcatgaagcatcacaatgacgtaa  16766900     ---------->DOF2  ------->GAMYB --------->MYB46(3) ------->P -------->ANAC58 -------->ANAC58 xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---->ANAC46 ---->ANAC58 -->TGA2(2) --SPL7 >ANAC55(2) -ANAC55(2) -bZIP60(1) -ANAC46 -TGA2(1)                                 <---------ATHB12 >bZIP60(1)                         --------->AtLEC2 >TGA2(1)       --------->LBD16  <------NtERF2 -ANAC58 <---------ARR11(3)     ------>NtERF2 -ANAC58 <---------GLK1(2)--------->MYB52(1)                                 <---------ANAC58 ->STF1  --------->ARR11(3) --------->ANAC46 <---------ANAC55(2)             <---------ANAC58 ---->ANAC58  <---------LBD16<-----------TGA1----------->GT1         <----------ID1    --------->RAP2.6(2)   gcaaccaaaaagattttccggtgagacttaacgtcgccatgcccatcaagtgaaactactacaaaatttgaacgacaaggcttatgaagccgaaactctt  16767000                                                                                                  <--                                                                                    <------NtERF2 ---                                                                                   ------>NtERF2 <---                                                                                  <---------DEAR3(1)                                                           --------->MYB52(1)     --------->DEAR3(1)<                                                           ---------->DOF2   --------->MYB52(1)  ----       <----------DOF2                               <-----------------------TaNAC69(2)        ------       <---------DAG2       --------->TOE2(3)      <----------ID1          <---------MYB52(2)<-------    <---------ALFIN1--------->ICU4               ---------->DOF2         ---------->DOF2 ---------->DOF2   aaacttccactttttcttcgtaatgaagaaacttaataagtttattagaaataaagacaaataaaggcaaaataccaaagaacggcgacgataaaaccgg  16767100          --------------->AGL15          <---------------AGL15     --------->DOF5.7(2)     --------->At5g28300     <---------MYB52(1)       --------->ANAC58    ----------->GT1          --------->SPL7    --------->ANAC46         --------->SPL1(2)  <---------LBD16           --------->SPL1(1) <---------At5g28300        <---------SPL1(1) --------->MYB52(1)        <---------SPL7 --------DOF2              <---------SPL1(2) ------>GLK1(1)          <---------------AtSPL3                                               ------- ------ARR14(2)         <---------At5g28300  --------->DAG2                                   ------- -----------GT1        ------------------>SPL14                                  --------->MYB52(1) ----->ARR14(2)    <<<<<<<ZML2--------->ANAC58                                   <---------LBD16 --->LBD16--------->YAB1<------------------SPL14                               --------->TOE2(2)    - --LBD16 <-----------------AGL3             ---------->DOF2                   --------->YAB1  -------   atttaccggtaactataactagaactcaccgtacggtattgaaacaaaaagttggaccatgtccgaacacaacctcacaaacatacgggaaggcatacga  16767200                                                                                               <-----                                                                                       --------->AHL20(2)                                                                                     <------------CBF                                                           ------>ZmHOX2a(2)        <---------ICU4                                                       <---------YAB1              <---------YAB1 -->ANAC58   <----------DOF2                    *TSS--------->GLK1(2)              --------->ICU4 <-- -->ANAC46 ---------->ID1                       <---------AHL20(2)               --------->YAB1------ --------->DOF2                              --------->AHL20(2)     <---------ANAC58--------->ATHB51 -->ANAC58<-----------GT1        ---------->DOF2--------->AHL20(2)  <---------ANAC58--------->ATHB12   aacaaagaattttttctttttctcaaaattttagagaaagaagagaataaaaaaattctgatcgaaaatagcttacttaaaaatcataattgaatagtat  16767300                                          <-----------GT1                                     <---------AHL20(2)                                     <---------YAB1                                    <---------AHL20(1)                                  --------->AHL20(1)                                 --------->AHL20(2)                                 --------->AHL20(2)                                  <---------AHL20(2)                                 --------->YAB1                                     --------->AHL20(2)                              --------->YAB1                                     --------->AHL20(2)                              <---------ICU4                                     --------->AHL20(1)                             --------->ICU4              <---------ALFIN1     --------->YAB1                             <---------YAB1     --------->YAB1               <---------YAB1 ----ARR11(3)              --------->YAB1 <<<<<<<<<GT-1--------->AtMYB61   --------->YAB1     ------- --------DOF2             <---------AHL20(2) ------->GAMYB     <---------ARR11(3)<---------AHL20(1) --->ARR11(3)            --------->AHL20(2) --------->MYB46(3) --------->ARR11(3)<---------AHL20(2)   cttttgtttttaaactaatttagtctatataataataatattattaaccatcgtaaaccacacatgatattcaatacttataataaattaatcgcataaa  16767400                                     --------->TOE2(3)                                    ----------->GT1                                    <---------ANAC55(2)                                    --------->ANAC55(2)                                    <---------ANAC46                                          <------                                  --------->MYB52(1)                                          -------                               --------->ANAC55(2)                                           --------                               --------->ANAC55(1)                                           <-------                               --------->ANAC46                                              --------                               <---------ANAC58                                           --------->AHL20(2)                               <---------ANAC58                                           <---------AHL20(2)                               <---------ANAC55(2)                                       <---------AHL20(2)                               --------->ANAC58                                          --------->AHL20(2)                       --------->AHL20(2)                      ------>ZmHOX2a(1)         <---------AHL20(1)                ----------->GT1--------->ANAC58         <---------AHL20(2)           <---------AHL20(2)        ---------->DOF2<---------AHL20(2)               <---------YAB1               --------->AHL20(2)     <---------ANAC55(2)     <-----------GT1           --------->AHL20(2)           <---------AHL20(2) -->AHL20(2)    <---------ZAT6<---------TOE2(3)        <---------AHL20(2)     ----------->GT1<-------   atacaatacttaaaacgagtgttatataattttacgtaacgtaaaacaatacaaaattttaattcctgaacgaataaaacgagtatattaattaatttat  16767500                                                                   --------->ATHB51                                                                   --------->AHL20(2)                            <---------YAB1                        --------->ICU4       <---------AHL20(2)   <---------TOE1(3)                  <---------YAB1 ------>ZmHOX2a(2)          <---------TOE2(3)             --------->YAB1 ---AHL20(2)              --------->YAB1                  -------->ATHB1                            - -->ATHB12               <---------ATHB12                 --------->ATHB51                          - ->AHL20(1)          ------>ZmHOX2a(2)                   <---------YAB1 <-----------GT1          <--- --AHL20(1)      <---------YAB1                     <---------ALFIN1   --------->AHL20(2)        ---- ->AHL20(2)   <---------ARR14(2)                    --------->ANAC46   <---------AHL20(2)    <-------TEIL --AHL20(2)   --------->ARR14(2)  <---------YAB1  <---------ALFIN1<---------YAB1            ---------   tgatcgtattaaaacgaatatgatccaattaagattacaattactaaaatccccacactattattgtcattatttaactatggcagatagatagatacag  16767600                                                                        <-----------ARR10    ------>ZmHOX2a(2)                                                                       --------->At4g35610  <------ZmHOX2a(2)                                                                       <------NtERF2       --------->ARR14(3)                                                                      <---------DEAR4(2)   <---------                                                                      ------>NtERF2  ------->GAMYB                                                                      <---------ERF1 --------->AtMYB61                                                                      <---------RAP2.3(1)  --------->ARR11(3)                                             <---------MYB52(2)       <---------ATERF1(1)  <---------ARR11(3)                                             --------->MYB46(3)      <---------RAP2.3(3)   <---------ARR14(2)       <------ZmHOX2a(1)       <---------DOF5.7(2)     --------->DEAR3(2)            <---------ALFIN1   ---------->DOF2            --------->WRKY45 --------->MYB52(1)    <---------RAP2.6(2)   --------->ARR14(2) -------->TOE2(3)             --------->WRKY12------->GAMYB          <---------DEAR3(1)    <---------ARR14(3) -------->TOE1(3)             --------->WRKY38(1)      --------->MYB46(3)           --------->MYB46(3) ------ARR14(2)      <------ZmHOX2a(1)    --------->MYB46(3)         <---------RAP2.3(2) --------->ANAC58 ----->ARR14(2)<------ZmHOX2a(1)<---------------------WRI1          --------->ATERF1(1)  --------->ANAC58 >CCA1(2)  <---------MYB52(1)--------->DOF5.7(2)       <------------AtMYB77    --------->TOE2(3)    -   aaccgtaaaggacgttaggaagaggaagaacgttgacgaagtcaacaacgaacagaaaccgtcgatttgaggcggctctaatctcaaccacacgatcttc  16767700  Previous    Next  AGI:  At3g45638.1    Description:  other RNA Range:  from: 16766200    to: 16767248    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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