Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->DEAR3(1)                    <------NtERF2                    --------->ATERF1(1)                   --------->At4g35610                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   ------>NtERF2                  <---------ARR14(2)                  --------->ARR14(2)                --------->LBD16              <---------LBD16             --------->MYB52(1)        ------>MYB46(1)            <---------ARR14(2)         ------>MYB83            --------->ARR14(2)       <---------MYB59           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------AHL20(2)        ---------->DOF2             --------->MYB46(3)    --------->AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->YAB1  --------->ICU4   ----------->GT1 <------   ttttaaaaccaaaagaaccggagccgaaccaaaatcgaaccaaactttcaaaataatcgaataaatattaaactttagaaccgaaaaaatcgattaccga  16756500                                                   <-----------HVH21                                                  ----------->GT1                                              <---------AHL20(2)        --------->TOE1(3)                    <---------YAB1        --------->TOE2(3)               <---------AHL20(2)        --------->AtMYB61               --------->ATHB51        <---------MYB59                 --------->AHL20(2)  <---------At4g35610   <-------TEIL                   <---------HSFB2a(2)       --------->At4g35610  --------->CCA1(2)               --------->HSFB2a(2)<---------WRKY38(1) ---MYB59              --------->MYB52(1) <---------YAB1 <---------ATHB12          --------->YAB1   atagatacaacctaaactgaatggataacagaacgtcgagaattatttttaatggtcaaatcagttgccaacaattttgaggcattaatactctcaattt  16756600                                                                                               <-----                                                                                               ------                                                                                      --------->ANAC46                                                                                     --------->SPL7                                                                                   <---------SPL7   <                               ------>MYB46(1)                                   <----------DOF2  <--                               ------>MYB83                                      <---------------AtSPL3                     --------->GLK1(2)      ------>MYB46(1)                     <------------------SPL14                     <---------ARR14(2)     ------>MYB83                        <---------ANAC58<----                     --------->ARR14(2)     -------->P                          <---------ANAC58-----                     ------->TEIL   --------->ZAT14                             <---------ANAC46-----               ------>ZmHOX2a(2)<-----------ARR10         <-----------GT1 --------->CCA1(2)    <-----         --------->YAB1     --------->DEAR3(2)------->GAMYB           --------->AHL20(2)       ------   tgccaaaacaattttgatctatgaatctggaccgactctactctccaacccaattggtattttccatctacttaaaatatgggcttgtacggcccaaatt  16756700                               <---------ICU4                              <---------ATHB12        --------->YAB1        <---------YAB1    <-----------GT1           --------->ICU4 <---------YAB1              <---------TOE2(3) ----ATHB51               <---------YAB1 --->ICU4                 --------->ICU4 ---------AHL20(2)    <-----------TGA1 -------YAB1          --------->TOE2(3)                  --------->ZAT18 -----ICU4           --------->ANAC46         --------->ANAC58      <---------ANAC46 ---->YAB1          <---------TOE2(3)         --------->ANAC58      <---------ANAC58          <------ZmHOX2a(2) --->ATHB1<---------CCA1(2) --------->YAB1    ----------->GT1       <---------ANAC58         -------- ----AHL20(2)      <-----------GT1            <---------ANAC55(2)----------->HVH21      ----------->RAV1(1) --->AHL20(2)   <----------DOF2--------->ATHB12--------->TOE2(3) ----------->TGA1       --------->MYB52(1)   attattttactcatatcgttttaacgtcattaatgattttctgaagaaacgtaaacatttgcactgtatgacgttttagagtgacaaaaacaacagatca  16756800                                                --------->YAB1                  --------->ANAC58   ------->GAMYB                               *TSS                  --------->ANAC46 --------->ANAC58                         ----------->GT1                  --------->ANAC58 --------->ANAC46              --------->MYB52(1)     <---------YAB1                --------->ANAC58           --------->ANAC46 ---------->DOF2 ->AGP1   <---------At5g28300    <---------ALFIN1     ------>NtERF2     ---------->DOF2   acaaatttcgattaccgtagacgacacgatgtttcacacccgactacgaatcacgacgacttatacaaaacagcaaaagcgtaaagacttgaacttaaaa  16756900                                        <---------ANAC58                                  ----------->HVH21                               ------>ZmHOX2a(2)        ------------------------>ANAC81 <---------ANAC58                             --------->YAB1     ----------->HVH21        <------ZmHOX2a(2)            ------->GAMYB            <---------ATHB12   <---------ANAC58         --------->GLK1(1)     --------->ARR11(3)<------MYB83  --------->WOX13(1)<   <---------ANAC58         <---------GLK1(1)     <---------ARR11(3)<------MYB46(1) --------->MYB46(3)   ccatggcgagaccgagacgaagaaacacagagatcggtgatggcttcacagagatattcaacagagagattggtttctctcatccaatcaccatctctcg  16757000              <---------TOE2(3)          ----------->RAV1(2)       <---------At4g35610  --------->GLK1(1)  <---------GLK1(1)  --------->HSFB2a(1)  <---------HSFB2a(1) <---------ARR14(2)                                             ------>ZmHOX2a(2) <-----------ARR10                                            --------->ARR11(3) <---------ARR11(1)                                           <---------ARR14(2)      <-----------GT1 ------->TEIL <---------TOE1(2)   --------->ARR14(2)          --------->ARR14(2) <---------ANAC58 --------->ARR14(2)               <---------ARR14(2)     <-----------GT1     <----------DOF2 ---------CCA1(2)        <---------AHL20(2)     <-----------GT1<------ZmHOX2a(2) <---------ANAC58   tcgaatctccgcttctgaggttctcattttttttcaaatactcttccatttctctattttctccgatcttgaactctctctttacttgtttccatttttg  16757100                                                                                       --------->YAB1                                                                                      <---------YAB1                                                                                --------->ICU4                                                                           --------->bZIP60(1)                                                                           <---------bZIP60(1)                                 <---------ANAC58                          <---------TGA2(1)     <----------DOF2             <---------ANAC58  ----------->GT1        --------->MYB59 ---------->DOF2   aatgagacttttcaacttgtgaagactttccaatttcttgctcaaaattggtatagaaatatgggttttggatagttatgtcatagttatcagaaagtct  16757200                                     <---------ZAT6                                ------>ZmHOX2a(2)                              ------->TEIL                              <---------ARR11(3)                                                    -                              <---------ARR14(2)                                           <---------ARR14(2)                              --------->ARR14(2)                                           <---------ARR11(3)                         --------->ATHB12                                                  --------->ARR11(3)                         --------->YAB1                          <---------YAB1            <---------           <---------GLK1(1)  --------->ARR11(3)             <---------ANAC58              --------->GLK1(2)       --------->HSFB2a(2)    <---------AGP1                 <---------ANAC58              --------->ARR14(2)       <---------HSFB2a(2)   <---------CCA1(2)       <---------ZAT6             --------->ARR11(3) --  <----------DOF2       <---------ATHB12   ---------->DOF2   <---------ANAC46  <------ZmHOX2a(1)  ---   tctccttttctagatttcagtttcgaatcatggatcttagtgttccaaagacgaagtgttatggcttatcagtgttttgtaggatgttgagaaaatctga  16757300 ------>MYB46(1) ------>MYB83                            <---------ARR11(3) -------->WOX13(1)          --------->ANAC58 --ARR10                    --------->ANAC46                                       <-----------RAV1(2) ------->AtMYB61            --------->ANAC58<----------DOF2                   <-----------GT1 ------>MYB46(3)  ----------->GT1        --------->ARR11(3)             <----------DOF2       <------   accaatccaaagacttatatcagttaaaacactcaaattttaagttctttggattgaactgtattgttgtttttcttttgttacttcaggggagagtgaa  16757400  Previous    Next  AGI:  At3g45620.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G35140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21781.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 16756881    to: 16759114    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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