Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC58                                         ----------->HVH21                                       <---------At4g35610                                       --------->At4g35610                                       ========================bZIP_DOF                                       --------->ANAC55(2)                                    -------                                       <---------ANAC55(2)                                 --------->LBD16                                       ========================bZIP_DOF                    --------->ANAC46                <-----------GT1        <---------O2                                        --------->ANAC58             <---------ICU4            <---------TGA1a                                     --------->ANAC58            <---------YAB1             --------->O2                                       <---------LBD16          <------ZmHOX2a(1)            --------->TGA1a     --------->AtLEC2               --------->LBD16     <---------REM1(1)             <-----------HVH21<----------DOF2                      <----------- ---------->RAV1(2)       <---------ANAC58    --------->ANAC58                   --------->DAG2     - ---------At4g35610       <---------ANAC58    ----------->GT1 ------->TEIL  --------->AtLEC2--------- -------->At4g35610<---------MYB59--------->YAB1 <-----------GT1 <----------DOF2---------->DOF2     -   tcatctgatgtaggattattacccaatttcttgcaattgtcacatgacaagttactttgccatgaaactttgcagttaatgcaaaagcgctccccgcatt  16723600                                                                                                    -                                                                                                <<<<<    --------->At4g35610                                                                         <----    <---------At4g35610                                                                        ====== <---------HSFB2a(1)                                                                           <----- <---------HSFC1(2)                                                                            <----- --------->HSFC1(2)                                                                           ------- --------->HSFB2a(1)                                                                         <------- -------------->WRI1                   --------->At4g35610                              --------->RVE1(1) ------AGL1                <--------P  <---------ZAT2                <---------LBD16   --------->ARR11(3) -------->ANAC58        <---------TOE2(3)                          --------->ZAT2   <---------AHL20(2) >LBD16    --------->GLK1(1)<-------TEIL                ---------->DOF2    <-------TEIL<---------ARR11(3) -------->ANAC58        <---------TOE1(3)      <-----------GT1   <---------ALFIN1   --------->AHL20(2)   ggaagcatctcacaaatccatcttctaaggtagatttagagagctcgattttcgacattaaagccgagcacctcgggttcgggcaataaaatctctccgt  16723700                                       <----------DOF2                                 =================bZIP_DOF                                 --------->TGA1a -------->HSFB2a(2)              <---------O2 <<<<MYB98                       <---------ALFIN1 -----MYB52(1)                   --------->ANAC46 ==========================================MYC_MYB                                 <---------ZAT2 ------HVH21          <----------DOF2  <---------DAG2                              --------->At4g35610 --GAMYB <---------GLK1(1)       --------->O2                                      <---------At4g35610 -->ANAC46   ------>ZmHOX2a(1) <---------ALFIN1                        <----------DOF2              < ----------AGL1       =====================bZIP_DOF          <---------YAB1        --------->ZAT2 ---   tactggaatggattcctcttcaatcttttgttcccacatcgcttttagtttagatgtcaaaatatgaaaacaacttttaagagtcagcttagactcacat  16723800                             <---------HSFB2a(2)                                         --------->ANAC58                             --------->HSFB2a(2)                                        --------->DAG2       <------ZmHOX2a(1)     <---------HSFC1(1)                                  <---------WOX13(1)      <----------ID1   <---------ZAT18                                         <---------ICU4    <---------ICU4--------->ZAT14                                              --------->ATHB12    --------->YAB1<---------ZAT18                                             <---------YAB1--------- --------->YAB1   <---------ZAT14                                       <---------GLK1(2)--------->ANAC58 ---------YAB1--------------->AtSPL3  <---------ALFIN1               --------->YAB1    ---------->DOF2 ------>YAB1  --------->ZAT6 --------->HSFC1(1)           --------->AtLEC2 <---------AHL20(2)   tgataataaggacatatcagtacagttccctctagaagcctcacttctatatatcgtttcatgcattccaaacagaatttatgattgcataaagcaacat  16723900                                                                <---------At4g35610                                                                <---------ZAT2                                                           --------->ANAC58                        <---------ICU4                     --------->ANAC58                        --------->ATHB12                   --------->ANAC46                       <---------YAB1               <---------ARR14(2)                       --------->ICU4               --------->ARR14(2)                     <---------ICU4                 <---------ARR11(3)                     --------->YAB1                <------ZmHOX2a(1)                    <---------ATHB12             <---------TOE1(2)                    --------->ICU4              <---------LBD16 --------->At4g35610            --------->ARR14(2)                  <-----------RAV1(2)          ----------->ARR10        --------->ARR14(2) ------>ZmHOX2a(2)     --------->GLK1(2) -->RAV1(1) <---------ARR14(2)     <---------ARR14(2)<------ZmHOX2a(2)  <-----------GT1             <   aatacatttgctcagatttgaaatcatcattgaaacatatactgcaagtctcaggatccacaagtaagctgatttcacaatctattgtttccattgcaaa  16724000                                                              ----------->GT1                       <                                                           <------MYB83                             <                                                           <------MYB46(1)                          <                                                          --------->MYB59                         <--                              --------->ANAC46        <---------AHL20(2)                        <----                           ------>ZmHOX2a(2)         --------->AHL20(2)                       <------                         --------->ARR14(2)     <---------GLK1(2)                      <---------AHL20(2)                         <---------ARR14(2)   <---------TOE2(3)                       --------->AHL20(2)  --------->TOE2(3)    <---------YAB1   ------->MYC3 <---------AHL20(2)      <---------AHL20(2)<----- -----------GT1   <---------At4g35610   <-------MYC3<---------YAB1         ----------->TBP  ---------   tttaacttaattttgagtttagatgatgatccgagccaaacacatgtttagattattaattaggtcgaaaaactgatatataaacatataaaattcggtt  16724100 ---------ANAC58 ---------ANAC58           <---------ICU4 ---------ANAC46           <---------AHL20(2) -------ANAC46       ----------->GT1   --------->REM1(1)                               <----------DOF2 -----MYB46(3)     ---------->DOF2   ------>ZmHOX2a(1)                                <---------DAG2 -GAMYB<---------ZAT14    --------->AHL20(2)                               ----------->GT1 ----MYB52(1)    <---------YAB1<-------TEIL         ----------->GT1  --------->DOF5.7(2)       ------ >MYB59--------->ZAT14    --------->ICU4    ------>ZmHOX2a(1)       <----------DOF2<-----------GT1   gtgcgtgagtgtagttagtatgaaagtaataaatacatcctacatcctatagagaagttaagagttaagactttaactagataaatcaccttttgaaatg  16724200                    --------->ARR11(3)                    <---------AHL20(1)                <---------AHL20(2)               --------->AHL20(2)          ========================HOX2a_HOX2a          ------>ZmHOX2a(2)         <------ZmHOX2a(2)                                                                  ---------         =========================HOX2a_HOX2a                                              ----------        <---------ARR14(2)                 <---------YAB1                             --------->YAB1        <---------AGP1                    --------->TOE2(3)                          <---------YAB1        <---------ARR11(3)    <---------ZAT6                                       --------->YAB1        <-----------ARR10   <---------TOE1(2)            <---------AHL20(2)    --------->AHL20(2)        --------->ARR11(3) <---------------AGL15     --------->AHL20(2)        --------->AHL20(1)        --------->ARR14(2) --------------->AGL15     <---------AHL20(2)        <---------AHL20(2)   <   <-----------GT1 ----------->TBP   <---------AHL20(2)  --------->AHL20(2)   --------->AHL20(2)    < --->ICU4--------->GLK1(1) ------>ZmHOX2a(1)      ------->TEIL                <---------AHL20(2)    <   atgtattacagatctcattttatatattcctagttttagttaattcttaatgtatttaaataaatgtataaatctctaaattaaattatcataaaaagta  16724300                                                         <--------HAHB4                                                         --------->YAB1                                                         --------->ATHB12                                                         <---------ICU4                                                        <---------ATHB12                                                      <-----------GT1                                                     --------->AHL20(2)                              <---------ARR11(3)     <---------AHL20(2)            <---------AHL20(2)                              --------->AHL20(1)  <---------ICU4                  <---------AHL20(2)                              --------->ARR11(3) --------->ICU4                   <---------AHL20(1)         ----------->GT1     --------->CCA1(2)   <---------ATHB51                 --------->AHL20(2)   --------->REM1(2)        <---------ARR11(3)   <---------AHL20(2)               --------->AHL20(1) >DAG2   <---------ZAT6     --------->ARR11(3)   --------->AHL20(2)      --------->TOE1(3)  --------- >DOF2 <---------ANAC46 ---------->DOF2      --------->AHL20(2)          <----------DOF2   --------->ARR14(2) ---------ANAC46     ----------->GT1         <---------AHL20(2)       <---------AHL20(2)   <---------ARR14(2) ---------ANAC58   <---------ZAT14       --------->AHL20(2)           <-----------GT1<---------YAB1 ---------ANAC58   --------->ZAT14     <----------DOF2--------->WOX13(1) --------->TOE2(3) <---------GLK1(2)   ttccttgtagagtgttaatagtatagtaaagatatattcttctttatataaataattaatcatttcaagtattaactttaaaaatttattctagattctc  16724400                                         <----------DOF2                                        =============================HOX2a_HOX2a                                        ------>ZmHOX2a(2)                                        ==========================HOX2a_HOX2a <---------ICU4                                      --------->ARR14(2)                      --------->YAB1                                      <---------ARR11(3)                     --------->ICU4                             --------->AHL20(2)                          <---------MYB52(2)                            <---------AHL20(2)                ------>ZmHOX2a(1)                   --------->ICU4     --------->ARR11(3)     --------------->AGL15       ----------->GT1  <---------AHL20(2)                   <---------------AGL15               <---  <---------AHL20(2)    --------->AHL20(2)                  <-----------------AGL1               ----  --------->AHL20(2)--------->ATHB51  <---------ARR14(2)    ----------------->AGL1           <-------  --------->AHL20(1)--------->AHL20(2)<---------AGP1        <-----------------AG   ----------->GT1 <- >GLK1(2)          <---------YAB1    <---------CCA1(2)     ------>ZmHOX2a(1) <---------ATHB12--------   taaataaaatagcaaaatttcattatttaaataatatgtggatcttttgtaaacacttctcctcctaattgggcaactaatcatggagttattttttaat  16724500  Previous    Next  AGI:  At3g45555.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G45580.1); similar to zinc finger family protein, putative [Solanum demissum] (GB:AAT40530.2); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16723353    to: 16723994    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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