Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->DAG2                          <---------ALFIN1                       ---------->DOF2                         <---------At4g35610             ======                    --------->ANAC58                           --------->ANAC46                ------             --------->ANAC46                                 ------->TEIL                     ====== ------>TOE2(3)     --------->ANAC58                         <---------ALFIN1                 ------- ------>YAB1 --------->ANAC58                           <---------ANAC58                      ------- >ANAC46     --------->ANAC58                           <---------ANAC58   <---------YAB1   <--------   acttaatttcattactagccacaagaaaagggatgctagatgaaaattgttgtcttatgcgttgcacctcatccattatcaaggcgattttcttatcctt  16695200                      --------->ICU4                      <---------ATHB12       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->GLK1(1)     <---------ARR14(2)     --------->ARR14(2)     <---------ARR11(3)                                                 <---------MYB59     --------->AGP1 ------>MYB46(1)                                     --------->TOE2(3)     <---------AGP1 ------>MYB83                                      ------->TEIL     <-----------ARR10<---------YAB1                              <-------MYC3     --------->ARR14(3)<---------ICU4                           ------->TEIL     --------->ARR11(3)<---------AHL20(2)                    --------->ANAC58    <---------CCA1(2) <---------ATHB51                     --------->MYB52(1) =============HOX2a_HOX2a                                  <---------DOF5.7(2) >ZmHOX2a(1)      <---------MYB59                        <---------MYB52(2)                     ----- ============HOX2a_HOX2a                                --------->At4g35610            --------->ANAC58 -->TOE2(3)    <---------WRKY18(1)                      <---------At4g35610            --------->ANAC58 -->TOE1(3)   ----------->HVH21                 --------->ARR11(3)------->MYC3      XXXXXXXXXXXXXXXXX -YAB1<---------GLK1(1)-------->HAHB4         <---------YAB1 --------->ANAC58    --------->MYB46(3)   aggcacagatctccccatgacctaattattcaaggcaaaacatcgattacgatattgaagctaacgcatgtgaacctaaatgaacagccaagaaaactta  16695300                                                --------->LBD16   <---------MYB52(1)                                              ------>ZmHOX2a(2)   <--------P                                              ==================================HOX2a_HOX2a                      ---------->DOF2    <---------WOX13(1)     <---------MYB46(3)                    <---------YAB1     --------->ATHB12      <----------DOF2               <------ZmHOX2a(1)      <---------YAB1     --------->ANAC58             <---------TOE1(2)      --------->CCA1(2)    --------->ANAC58                      ------        --------->ARR11(3)         <---------ARR11(3)    --------->ANAC46                      <----- --->P  <---------ARR11(3)         --------->ARR11(3)   <---------LBD16   <---------TOE1(2)  -------- XXX>MIR169A<---------LBD16      <---------TOE2(3)     --------->MYB52(1)------>ZmHOX2a(1)--------->At4g35610   ccaattcaaaaatctcaggattatcaaagaacattgagatatgattgatccgaaaactcacggctttggttagtcctagcttcaatgccataagctcagc  16695400                                                                                                   --                                                                                           ------>NtERF2                                                                                           --------->LBD16             --------->ALFIN1                                                             --------->ANAC46         ---------->DOF2                         --------->ARR11(3)                       --------->ANAC58    --------->ZAT2                               <---------ARR14(2)                       --------->ANAC58    <---------ZAT2                     --------->TOE2(3)--------->YAB1                --------->ARR14(2) --->At4g35610  <------NtERF2    <----------DOF2 --------->ARR14(2)                   <---------ARR14(2) ----At4g35610<---------LBD16    <---------DAG2  <---------ARR11(3)              ------->GAMYB  <---- -->CDC5 --------->ZAT14 ----------->GT1<---------------AGL15------>ZmHOX2a(1) -------->P<---------LBD16   ctcccaagctgtaaagtcggggtaatgaagtgaaacttttttcttaaacaagatactatcatcctcttctctgtaaattgcaaccccaaatcccgccaat  16695500                                            --------->ALFIN1                                          --------->At4g35610                                          <---------O2                                          <---------TGA1a                                          <---------ANAC55(2)                                          <---------At4g35610                                          --------->O2                                          --------->TGA1a                                          --------->ZAT2                                          <---------ZAT2                                        <---------MYB55(1)                                        ------------->DYT1                       <-----------HVH21<-----------RAV1(2)                 <---------SPL7        <---------MYB52(1)            ------>NtERF2  <---------DAG2               <---------------AtSPL8 <-----------HVH21          --------->ALFIN1   <----------DOF2               <---------------AtSPL3 <-----------TGA1         --------->ALFIN1   <---------TOE1(2)          ==========================================bZIP_DOF <---------ANAC46  --------->TOE1(1)          ---------->DOF2   --------->ARR11(3)               <---------ANAC58  --------->TOE2(1) ----->TEIL <---------TOE2(3)       --------->DEAR3(2)       <---------ANAC58 <---------HSFB2a(2) -----ATHB12<---------TOE1(3)       --------->MYB46(3)    --------->ALFIN1    --------->HSFB2a(2)   gaacccttgaagtaaaggttgtacgagtcagaacttgaaccgtcaggtgagggttttccagtggggtttggggccatcttctcgtactttttgtgcaaac  16695600                      <------MYB46(1)                      <------MYB83                     --------->MYB59                     --------->MYB46(2)                     --------->MYB111(1)                                  --------->YAB1  --------->ANAC58                 <---------TOE1(3)                                        <------ZmHOX2a(1)                 <---------TOE2(3)                                      <---------TOE2(3) --------->ANAC58            <---------ZAT6                                     --------->YAB1    <------------CBF     --------->AHL20(2)      <---------YAB1                   <---------YAB1   <---------YAB1-------- <---------TOE2(3)  <--------P                        <---------ARR11(3)<---------TOE1(3) --------->ANAC46   tctaagattatttagtgttaaggtaggttttatgactcgtagaactctcttaaacaaatcttatatgataagttaaggataactattgaaacaagaaacg  16695700                                                                                              -------                                                                                              -------                                                                                     --------->ATHB51                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                     <---------ICU4                                    <---------ARR14(2)                           <---------YAB1                                    --------->ARR14(2)                           <---------AHL20(2)                                    <---------GLK1(2)                            --------->AHL20(2)                      <-----------ARR10                                         <---------AHL20(2)                      <---------ARR11(3)                                        --------->AHL20(2) <-                      --------->ARR14(2)                                  <---------TOE2(3)   <------                      <---------ARR14(2)          <-----------ARR10    <---------AHL20(2)     <------                      <---------ARR11(1)          <---------ARR11(3)--------->AHL20(2)       --------                     <---------ARR14(1)           --------->ARR11(3)<---------AHL20(1)   --------->AHL20(2)                     <---------CCA1(2)           <---------CCA1(2)  <---------AHL20(2)   <---------AHL20(2)                     --------->GLK1(1)       --------->ANAC58       --------->AHL20(1)  --------->AHL20(2)       ----------->GT1--------->ARR11(3)     --------->ANAC58     <---------AHL20(1)--------->ICU4 -- ->CCA1(2)     ---------->DOF2    ----------->ARR10           --------->YAB1   --------->YAB1<-------   agagagaaatggaaacttaaagcatatctacttgtttagatactctcacgaatatctcaacaaaacataatattttaagaattttaattatttaattaaa  16695800          ----------->GT1 -->AHL20(2)                                                           --------->AHL20(2) -->AHL20(1)                                                           <---------AHL20(2) --------AHL20(2)                                                    --------->CCA1(2) ---AHL20(1)                                                        --------->ARR11(3) ---AHL20(2)                                                ------>ZmHOX2a(1) ->AHL20(2)                                             --------->ARR11(3) ------->AHL20(2)      <---------ICU4 ----------->GT1   <---------ARR11(3)        ----------->GT1 --AHL20(2)----------->GT1     <---------TOE2(3)     --------->YAB1 <---------ARR11(3)   tttaaattagtgagggaaaaaaaactaattactaagataaatgtgaaaaaacccataatatcctatataagatataaatgaaaaatgtgaaatggggttc  16695900                                                                        <---------WOX13(1)               ------->TEIL                                            <---------ARR14(2)            --------->ANAC55(2)                                    <---------LBD16            <---------ANAC55(2)                                   <---------ANAC46           <---------LBD16                                  <---------AHL20(2)           --------------->AtSPL8                         --------->ANAC55(2)          <-----------GT1           ------>MYB83          --------->ANAC46         <---------YAB1             ------>MYB46(1)     <---------YAB1 --------->ARR14(2)       <---------ICU4          --------->MYB52(1)<-------GAMYB    <---------LBD16      <---------YAB1         <---------MYB59    ----------->GT1  <---------LBD16                   --   <---------YAB1 <----------DOF2----------------->AG --------->YAB1--------->LBD16               <--   <---------TOE2(3)--------->AHL20(2)----------->GT1<---------YAB1--------->HSFB2a(2)           ----   ttaataagattattacggaccttttattaagcctaaccaaatgtgaaatggggttattataagtaatttcggggattggcaactatttgtttctcttgaa  16696000                     -------->ATHB1                     <---------ICU4                     <------------ATHB5                     <--------HAHB4                     --------->ATHB12                     --------->YAB1              <-----------GT1          ------->TEIL  <---------ICU4       <---------ANAC55(2)       --------->ANAC55(2)                                         --------->AHL20(2)       --------->ANAC55(1)       --------->O2          <---------AHL20(2)       <---------ANAC55(1) <------ZmHOX2a(1)           --------->AHL20(2)  <---------ICU4    <---------ATHB12                  --------->AHL20(2)          --------->CCA1(2) <---------ATHB12   --------->ICU4                    <---------AHL20(2)   --------->YAB1 ------->WOX13(1)  ------>MYB83  --------->TGA1a      --------->YAB1      --------->ZAT6 -------AHL20(2)   ------>MYB46(1)                --------->AHL20(2)     <---------TOE2(3)          < ----->AHL20(2)   --------->WOX13(1)              <---------AHL20(2)    <-----------GT1 --------->ARR11(3)   taaatcaatacgtattttaccaatcattaggactctcgtctcacttatgtttttaattaaaattttggataaattaacaataagacatgagttcttgatt  16696100  Previous    Next  AGI:  At3g45480.1    Description:  nucleic acid binding / protein binding / zinc ion binding. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G45460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21795.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16694189    to: 16695577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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