Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ANAC58                   <-----------HVH21        --------->ANAC46 --------ANAC58        <------ZmHOX2a(1)                <---------ZAT18                     <-------- --------ANAC46 --------->At5g28300           <---------DAG2                           <----------DOF2   ggcttgattttcagtcacagtaacaggaatgctagatgtcagttctcgccttatgcattgcacatcatccattagcaaggcgatgttctctttctcaggc  16690600                --------->MYB52(1)                ------>MYB83                ------>MYB46(1)               ----------->HVH21              <---------MYB59                                --------->GLK1(1)          ----------->HVH21                                  --------->CCA1(2)        --------->At4g35610  <---------At4g35610                                       --------->ARR14(2)        <---------At4g35610  --------->At4g35610                                       <---------ARR14(2)     ---------->DOF2 <---------ARR14(2)                      --------->YAB1--------->MYB52(1)  --------->MYB46(3) --------->GLK1(2)         ----------->GT1         --------->ANAC58   --------->TOE1(3) --------->ARR14(2)       <---------TOE1(3)        --------->ANAC58 ------->TEIL --------->ANAC58 <-----------ARR10        <---------TOE2(3)    --------->YAB1<---------GLK1(1)   --------->ANAC58 ---RAV1(2)<---------WRKY18(1)     --------->TOE2(3)  ---------->DOF2----------->RAV1(2)   gctaatctgcccatgacctaacacattcaaggtaaaacatcaataacaaaaataagcaaagggatatgtgaacctgaacagccaagaaagcttaccaatt  16690700                                   <---------WOX13(1)                                 --------->ATHB12           <---------MYB52(1)                             --------->ARR11(3)            <-------GAMYB                             <---------ARR11(3)           ----------->GT1                           <---------TOE2(3)       --------->ANAC58                   --------->At4g35610             --------->ANAC46                      <---------At4g35610              <------ZmHOX2a(2) <---------YAB1     --------->ANAC58                      --------->At4g35610             <-----------HVH21--------->CCA1(2)   <---------LBD16      <----------DOF2 ---------->CDC5    --------->ZAT6 <---------At4g35610           --------->MYB52(1)------>ZmHOX2a(1)--------->At4g35610   catataactctaaacgatcacagcagattgagatatgattgattcccaaactcacggcttcggttaatcctcgcttcaatgccataagctcagcctccaa  16690800                                                                                                 ----                                                                                          <---------YAB1                                                                                          <---------ATHB51                                                                                         <---------MYB52(1)                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                 <-------TEIL                        --------->LBD16                                ----------->RAV1(2)                                 --------->ANAC46                                <---------At4g35610                                <---------LBD16         --------->ZAT14        --------->At4g35610    ------>ZmHOX2a(1)        <---------ARR14(2)        --------->ALFIN1   ------>ZmHOX2a(1) <---------ARR11(3)                 --------->ARR14(2)     <------------AtMYB77------>ZmHOX2a(2)   --------->ARR11(3)            --------->TOE1(3)     <--- --------->At5g28300     =====================================HOX2a_HOX2a  --------->TOE2(3)     <---   aactgtaactgtggagtcatgaagtgatcctttcatctgaaacaagagatattcatcctcttctctgaaaattgcaacctcaaatcccgccgataattga  16690900                                                                                         ------>NtERF2                                                                                       <---------RAP2.6(2)                                                                                    --------->ARR14(2)                                 <---------TOE1(3)                                  <---------ARR14(2)                          ---------->DOF2                                         <---------ANAC58                       --------->TOE1(3)                         --------->ALFIN1 <---------ANAC58                       --------->TOE2(3)                        <-----------HVH21<------NtERF2                   ------>MYB83---------->DOF2              <------NtERF2      --------->ALFIN1 ----->At4g35610   ------>MYB46(1)              --------->ICU4 --------->LBD16<---------MYB52(1) ------At4g35610 <---------MYB59 <---------TOE2(3)   ---------->DOF2       <---------LBD16 ------ZAT2      <---------MYB46(2)         <-----------HVH21<---------LBD16 --------->LBD16        <   gctgatgttttctcccttaccaaacccttaaagtaaaggttgtatgtgtcagaatgaaagtcgcccggtgagggttttccggtggggtttcggccatagt  16691000                                                          <---------ANAC46                                                          <---------ANAC58          --------->ANAC58                                                --------->ARR11(3)      ----------->GT1                              <-----------RAV1(1)         <---------ANAC58          ----------->HVH21     --------->LBD16       ------->TEIL         <---------ARR11(3)     <---------TOE1(3)    <---------LBD16        --------->GLK1(2)    <---------ARR14(2)     <---------TOE2(3)    --------- ----------DOF2 <----------DOF2                 --------->ARR14(2)------>NtERF2     --------->ANAC58<   ctctttccagggttccttctttctccatgaatctgttgcacatacttgaagatttgtttttcgtagggggcctaaggtttaatgactcgacacatacaat  16691100                                          <---------ANAC58                                          <---------ANAC46                                   <---------STY1(2)                                   --------->ZAT2                        ---------->DOF2                                   <---------ZAT2                       <---------AHL20(2)                                   --------->STY1(2)                   <---------AHL20(2)                              ------>NtERF2                            --------->AHL20(2)                             --------->ARR14(2)                     --------->YAB1                             <---------ARR14(2)                    <---------YAB1                            --------->ATERF1(1)                    <---------AHL20(2)               -                           <---------RAP2.3(1)                 <----------DOF2              <--------    <-----------TBP        <---------ATERF1(1)                 <---------DAG2               --------- --->CBF     --------->AHL20(2)  ------>ZmHOX2a(1)          <-----------GT1        --------->MYB52(1) ---------TOE1(2)     --------->At4g35610 <---------ANAC58 --------->AHL20(2) --------->ZAT18   -----   tctaggttttatagattatatatcagaagcggctcctagctcgttcgtgtgattaaactaattaactttataattaaaagggaactaagagaaattaaaa  16691200                                                                                               <-----                                                       <---------AHL20(2)          <---------YAB1                                 <----------DOF2    <---------ARR11(3)            <---------AHL20(2)                            --------->AHL20(2)      --------->AHL20(1)            --------->AHL20(2)     --------->ZAT18        <---------AHL20(2)      <---------AHL20(1)           --------->AHL20(2) --------->DOF2      ----------->GT1                --------->ARR11(3)      --------->AHL20(2) ------ -AHL20(2)         ---------->DOF2              <------ZmHOX2a(1)         ----------->GT1      ------ >AHL20(2)    --------------->AGL15           <---------TOE2(3)          --------->DAG2--------->AHL20(2) ----->DOF2   <---------------AGL15           <---------TOE1(3)         ---------->DOF2<---------AHL20(2)   aagaaagagccctatgcaaaaaaaagaaaattaaacttttatcaaattaaggaatattttttcatatatatcaaaaaagtaaattaaaattaaaaaacct  16691300                                              <---------AHL20(2)                                              --------->AHL20(2)                                             --------->AHL20(2)                                    <---------------AtSPL8                ------>ZmHOX2a(2) ----MYB59      --------->DAG2      --------------->AtSPL8     <---------YAB1--------->HSFB2a(2) --->TOE1(3)   ---------->DOF2   --------->DAG2           --------->DAG2--------->ARR11(3)  <-------TEIL --->TOE2(3)<----------ID1      ---------->DOF2          ---------->DOF2<---------ARR11(3) --------->CCA1(2)   aaacaaaaacgatagggaaaagtaatgttatcggaaaagtagtactattaaaaaaaaaaaaaagtatttttgttgatctctagacctcataagatacaaa  16691400                                          --------->ARR14(2)                                          <---------ARR14(2)                                         <----------TaMYB80                                      <---------At4g35610                               --------->ARR14(2)                                --------->YAB1                               --------->ARR11(3)    --------->ZAT14            <---------ATHB12      ---------->DOF2       <---------TOE2(3)        <---------ZAT18          --------->WOX13(1) ---- ----------->GT1 --------->YAB1<---------ARR14(2)    <---------ZAT14   <---------ATHB12         <----   gaattgagaaaagagtgtttcataacaactatggatattcagcatatacgaccagtccaccatgagcatacaaatcatcccaatcatcttcattcaccat  16691500  Previous    Next  AGI:  At3g45460.1    Description:  zinc ion binding. similar to nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G45480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21795.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867) Range:  from: 16689419    to: 16691028    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g45470.1    Description:  zinc finger protein-related. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G25360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21795.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61819.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16691490    to: 16692246    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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