Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <-------TEIL                              --------->ARR14(1)                              --------->CCA1(2)                             --------->ARR14(2)                             --------->ARR11(3)                             --------->ARR11(1)                   --------->ARR11(3)                  <---------CCA1(2)                        --------->ARR11(3)                 <---------ARR11(3)                        <---------ARR11(3)                 --------->ARR11(3)        --------->ARR11(3)                                     ---                 <---------AHL20(1)        <---------ARR11(3)                                     <--         --------->ZAT6      <---------ARR14(2)    ----------->GT1                               <---      --------->REM1(1)    ----------->ARR10   ---------->DOF2                          <----------DOF2 <---------MYB46(3)<---------ARR11(3)   --------->AHL20(2) <---------AHL20(1)        --------->ARR11(3) -->GLK1(2)      --------->AHL20(1) <---------ETT(2)       --------->AHL20(1)        <---------ARR11(1) --GLK1(2)      --------->AHL20(2) <---------------------WRI1                       <---------CCA1(2)   tattggttacaacactaaatatatcttctaagatacggtcgataaaatctaaagagcaaaaaatatttcatattctatcaattctcaaatctttttttta  16623900                                                               <---------AHL20(2)                                                            --------->ARR11(3)                                                         <---------TOE2(3)                                                        ---------->DOF2                                                    -------->HAHB4            --------->TOE2(3)                      <---------YAB1      --------->ARR11(3)                           <---------ATHB12--------->AHL20(1)      --------->GLK1(2)                --------->YAB1 <---------YAB1               <<<<<<<ZML2      <---------ARR11(3)     --------->AHL20(2)    --------->ICU4  <---------AHL20(1) ------>ARR11(3)            --------->AHL20(2)------->GAMYB <---------ARR11(3)  <---------HSFB2a(2) -------ARR11(3)        --------->AHL20(2) ----------->RAV1(1)--------->AHL20(2)--------->HSFB2a(2)-- ------CCA1(2)     ----------->GT1--------->AHL20(2)--------->ATHB12<---------AHL20(2)----------->GT1   tatctcaaaatctttcttaacgagaaaaaaataaaaaaaaatcatcaacagaaatgattaaagattttatatatttcaaagtctagaacagaaaaaccca  16624000                 ------>ZmHOX2a(1)                <---------------AGL15                --------->TOE2(3)                --------------->AGL15          <---------ARR11(3)          --------->AHL20(1)          <---------AHL20(1)          --------->ARR11(3)       --------->AHL20(2)       <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2)  <---------AHL20(1)  --------->AHL20(1)                                                                                -  --------->ARR11(3)                                                                 <------ZmHOX2a(2)  <---------ARR11(3)                                           ---------->ID1       --------->ARR11(3) --------->AHL20(2)         <------ZmHOX2a(2)           <------------------------ANAC81   <---------ZAT6 ------->AHL20(2)==================HOX2a_HOX2a    --------->GLK1(2)                 <---------ARR11(3)   aaaatatattaaaatattcctcaaatagcgatcaaatgagaaaatcaagaacaatctagggttttgtttttttggttttaatgaacgatctagtgtttta  16624100                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                              <------NtERF2                                                                                             --------                                                                                           <---------LBD16                                    <---------ARR11(3)                                     <------NtERF2                                    --------->ARR11(3)                                    ------>NtERF2                                    --------->ARR14(2)                                    <---------ATERF1(1)                                  ----------->ARR10                                      --------->DEAR3(1)                               --------->ANAC46                  ----------->HVH21       <---------DEAR3(1)                      <----------ID1<---------ARR14(2)  --------->ATHB12               <-----------HVH21 --------->DOF2      <------ZmHOX2a(1)            --------->ETT(1)                   <------NtERF2---   aaaaaagagagagtgagagagaaggagacaaacacgaagaactgcttcgatgtcggaatcaatggaggtgaagaggcgagagaaggcatcgtcgccggaa  16624200                                       <---------DAG2                                       <----------DOF2       --------->MYB52(1)            <---------TOE1(2)                                        <------      ----------->HVH21            <---------SPL7                                             -------     ------>ZmHOX2a(2)            <---------ANAC58                                    --------->ARR11(3)    <------ZmHOX2a(2)             <---------ANAC58                                    <---------ARR11(3)   --------->ARR14(2)            --------------->AtSPL3                               <---------ARR14(2)   <---------ARR14(2)        <---------ANAC58                                         --------->ARR14(2) --------->DEAR3(1)       <---------SPL7                                             <---------CCA1(2) ------NtERF2<---------MYB46(3)  ---------->ID1                                      --------->GLK1(1) ----->ATERF1(1)         <---------ANAC58       --------->ARR14(2)            --------->MYB52(1) ------ABI4(2)           <---------ANAC46       <---------ARR14(2)           <---------WRKY18(1)    < -----ATERF1(1)          <---------ANAC58       <-----------ARR10           ----------->HVH21-------- ->LBD16    --------->ALFIN1 <---------ANAC58   --------->GLK1(2)         --------->WOX13(1) -------- ------>DEAR3(1)        --------------->AtSPL3 <---------CCA1(2)        <---------YAB1<---------ARR11(1)   gcgccgatctcacggtgtttgtcgatgtcgtacttgtcgtactttttgcaaatctcgtcgactctgaagatgatatcaatgaccggcatatctacaagct  16624300                                                             <----------DOF2                                                             ------>ZmHOX2a(1)     <---------------AGL15                                 <-----------------AGL3     --------------->AGL15                                 ----------------->AGL1                   -     ========================================================================MADS_MADS              <   <<<<<<<<<TBF1                                          ---------->ID1                           -- ---HSFC1(2)                <------MYB83                --------->WRKY38(1)                      <--- -->HSFC1(2)                <------MYB46(1)             --------->WRKY12                         <--- <<<<<<<<TBF1            *TSS                          <---------MYB52(1)                        <--- ->ANAC58               --------->ARR14(2)            <------------------------ANAC81         ------- ->ANAC58               <---------ARR14(2)            <-------GAMYB                         <--------   tcttcttcttcttgtggaatgtctccgatttggttctctgtttcttcgttcttctccgttgtccttttttggagtctctcttcagaaacgagacgcttag  16624400        <------NtERF2       --------->LBD16      <---------ANAC46     <---------LBD16   --------->ANAC46                                                                                -- <---------DOF5.7(2)                                                                              --- -------->ARR14(2)                                                                                <-- ---------ARR14(2)                                                                                <-- ------->DOF5.7(2)                                                                             ------ ------ANAC58                                            <----------DOF2              <----------DOF2 ------ANAC58                                    --------->AHL20(2)                --------->ARR11(3) ------ANAC46                              <---------MYB52(1)                      <---------AHL20(1) --->CDC5             --------->YAB1  <-----------GT1   <---------ANAC58           <---------ARR11(3) --CDC5------>NtERF2<---------YAB1 <---------AHL20(2)   <---------ANAC58  --------->ZAT6    ---------   cgtaaacggcgggattagaagtattaatagttagaatttttttctgtttttttatatagcttttcaaaccagttttagactacaatatctttaagcataa  16624500       <---------AHL20(1)       --------->AHL20(1)       --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(2)                                               <---------AHL20(2)  --------->AHL20(2)           ---------->DOF2<---------ANAC46     <---------AHL20(2) ------->AHL20(2)       <---------MYB52(2)    <---------ANAC58     <---------AHL20(1)       --------- ------>AHL20(1)        <---------MYB111(1)--------->ZAT18         <---------ARR11(3)  <---------ZAT18 -------AHL20(1)        <---------MYB46(2) <---------ZAT18         --------->AHL20(2)  --------->ZAT14 -------AHL20(2)  --------->ZAT6   --------->ARR11(3)              --------->AHL20(1)  <---------ZAT14 --->AHL20(2)   <---------ARR11(3) <---------ARR11(3)              --------->ARR11(3)--------->At4g35610 >YAB1 <---------AHL20(2) --------->MYB52(1)  <---------ANAC58   ------->TEIL        <---------At4g35610   aatatttaataaattgattatctctaactaacaaaaagattttagtgggcttgtaaacttgcatatgaatatatttgaataaaactcagttcacttgtga  16624600                                    --------->At4g35610                                    <---------At4g35610                               <------MYB83                               <------MYB46(1)                              <---------MYB46(3)                       <---------ARR14(2)                                                       -----                       --------->GLK1(2)              <---------------AtSPL8              ---------->DOF2                       --------->ARR14(2)             --------------->AtSPL8            --------->ANAC46            --------->GLK1(2) --------->MYB59         --------------->AtSPL3         -------->P <----           <---------GLK1(2)<---------MYB52(1)  --------->TOE2(3)                 <---------ANAC58           --------->ARR11(3)<---------MYB55(1)----------->GT1                    <---------ANAC58  - -->GT1---------->DOF2--------->RVE1(1)  --------->ANAC46                  <---------ANAC46  --------   aaaaaaaaaaaaagattctgcaaaaaatccgtttggtcagtttacgaaaacgtttaatagtactatttcagtattttgggtatagcttacccgaaagttt  16624700        --------->AHL20(1)        <---------AHL20(1)       <---------AHL20(2)       --------->AHL20(2)       --------->YAB1    <---------ICU4                         --------------->AGL15                                    -   --------->ICU4                         ----------------->AGL1                       <---------AHL20(1) --------->YAB1                           ----------------->AG                         --------->AHL20(1) ---->AHL20(2)                            <-----------------AGL1                       <---------ARR11(3) -----AHL20(2)                        <---------ANAC58           <-----------GT1       --------->ARR11(3) -------->AHL20(2)      <------ZmHOX2a(2)-------->P    <---------TOE1(2)            --------->AHL20(2) --->GT1<---------AHL20(2)            <---------ANAC58 <---------TOE2(2)   --------->ZAT6          --   aaataaaaattatattcgatctatggatcatatgggtatagcttacccatatgggcctaggttttattaacatgttaacacaaaaaaaaaatatttcgaa  16624800  Previous    Next  AGI:  At3g45280.1    Description:  SYP72 (SYNTAXIN OF PLANTS 72). Identical to Syntaxin-72 (SYP72) [Arabidopsis Thaliana] (GB:Q94KK6;GB:Q9M3E9); similar to SYP71 (SYNTAXIN OF PLANTS 71) [Arabidopsis thaliana] (TAIR:AT3G09740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21821.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727) Range:  from: 16622398    to: 16624325    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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