Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ANAC46                                                    <---------ANAC58                                                    <---------ANAC58                                                    <---------ANAC55(1)                                            --------->MYB52(1)                                            --------->YAB1                                      --------->ANAC58 --------ICU4                         --------->ANAC58         <----------ID1               --------- ->YAB1      --------->ATHB12       --------->CCA1(2)  --------->REM1(2)       --------->At5g28300 --ICU4<---------YAB1             --------->YAB1   <-----------------------TaNAC69(2)      --------->ANAC46 -ATHB12  ------->TEIL           <---------ATHB12--------->ALFIN1             ----------->GT1   accatgactatgaaactattggaagacaaaaatcaatgatacacaataacagtggcgtgaagaaaacaacaaattcgaagcagtaaataacatccgaaat  16558900                                        --------->AHL20(2)                                       <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(1)                --------->MYB52(1)                                 --------->ANAC46                      --------->MYB46(3)                                 --------->ANAC58                    --------->YAB1                                 --------->ANAC58             --------->At4g35610                           --------->MYB46(3)            --------->WOX13(1)--------->ANAC58      <---                         <-----------GT1<---------AHL20(2)  <---------ICU4 --------->ANAC46      ----                       <---------MYB52(2)   <-----------GT1<---------ATHB12--------->ANAC58     ----- >LBD16        ----------->GT1 <---------ALFIN1        <---------ATHB12<---------MYB52(2)       <----   caaattcagtatcagtatcgaaacaattaacctccacacaattaatttacaggcgaaatcaatcagttcaataacaaacgaaatctaaaacatttcagaa  16559000         <---------ANAC55(2)         <---------ANAC58         --------->ANAC55(2)         <---------ANAC46         <---------ANAC58     <----------DOF2           ---------->DOF2 ------ARR11(3)            <-------TEIL ----->ARR11(3)          <---------ARR14(2) ---->GLK1(1)            --------->ARR14(2)                                  <---------YAB1     ----- -----GLK1(1)     ---------->DOF2              --------->YAB1   <---------------AtSPL3     <---------   atcttcactttgcgtaagaacaaagcagattcagaaagaaacaatcgattcagaataaaacgatactaagtacgaattcatgagtagagaagactttgta  16559100                                                                                                  ---                              --------->At4g35610                                                <<<<                       <---------At4g35610                                                       <<<<              <---------ZAT2  <---------At4g35610                                                <<<<              --------->At4g35610                                                                <---              --------->ZAT2<---------WRKY38(1)                  >>>>>>>>>TBF1                   <---              <---------At4g35610  <---------HSFB2a(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        ---------->DOF2--------->At4g35610                    >>>>>>>>>TBF1                      <<<<     --------->LBD16   --------->ZAT14                <---------YAB1         >>>>>>>>>TBF1      -----  --------->MYB52(1)   <---------ZAT14              --------->YAB1        >>>>>>>>>TBF1         <---- ---->ZAT14  ----------->RAV1(1)   --------->HSFB2a(2)--------->ICU4   >>>>>>>>>TBF1            <---- -DOF2 ----------->HVH21    <---------WRKY12     <------ZmHOX2a(1)  >>>>>>>>>TBF1              <-----   tactcaccggtgaagcagcagagagagcagtcaacttccaaaacatggtgaggatgatgatgaagaagaagaagaagaagaagaagacgagctaattaga  16559200     --------->YAB1    <---------YAB1 --->ZmHOX2a(2) <<<<<GATA-4 <<<<<GATA-1                       --------->ZAT18 <<<<<GATA-2                       <---------ZAT18 ---ZmHOX2a(2)                     <---------ZAT14 ------GLK1(1)                     --------->ZAT14             *TSS <<<<<GATA-3                    ---------->DOF2           ----------->GT1                   --------- ---->ARR11(3)               --------->TOE2(3)           <---------HSFB2a(2)                <-------- -----AGP1                 <---------ARR11(3)            --------->HSFB2a(2)             <-----------RAV1(1) -----ARR11(3)      <---------ATHB12                   ----------->RAV1(2)  --------->TOE1(3)       > ----CCA1(2)      --------->WOX13(1)                   <---------ANAC46     --------->TOE2(3)<-------   tctcttatcagagcgaaactcaatcactaaatcttagagcactcgtcaaaaaaactcgcctggaaaaaaaaaaaaaaaccctaatttgatgctggtggtg  16559300                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                         <---------AHL20(2)                                                                                        <---------AHL20(1)                                                                                        <---------ARR11(3)                                                                                   --------->AHL20(2)                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->AHL20(1)                                       --------->ANAC58                            <---------AHL20(2)                          --------->ANAC55(2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------AHL20(2) >ALFIN1   --------->ANAC46            --------->ANAC58                       <---------At4g35610 -AtMYB61  --------->ANAC58          ---------->DOF2xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->ARR11(3) >>>>>>>>TBF1             <---------ANAC55(2)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->AHL20(2) --MYB46(3)--------->ANAC58    <---------YAB1     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2)   aagaagaagaggcacgaaatgagaaatcacataatgttagaaagcatccaaaaaaaaaaaaaaaaaaaaaaactaatctcagcaaataaatatatttaaa  16559400                                                                                     <-------TEIL                                                                        <---------ARR14(2)         --                                                                        --------->ARR14(2) --------->ATHB12                                         <---------ANAC46           <-------TEIL    --------->CCA1(2)          ---------->DOF2                <---------ANAC58        <------MYB83      --------->ARR11(1) -->AHL20(2)                             <---------ANAC58        <---------MYB46(3)--------->ARR14(2) --AHL20(2)        <---------YAB1   <---------YAB1               <------MYB46(1)   <---------ARR14(2) ->AHL20(2)        <---------AHL20(2)  <---------YAB1        --------->ATHB12     --------->CCA1(2)<-   ataaaactatatgaaagaaatattatttgttttagagtatgatgcttgtgactactagttgcacgattggttcgtatttgagagagatacgagtgattag  16559500                                                  ----------->GT1    --------------->AtSPL8                                            --------->ICU4           --------------->AtSPL3                                            <---------ATHB12<---------ANAC58   <------MYB46(1)                         <---------TOE2(3)<---------ANAC58                        -   <------MYB83                    <---------TOE2(3)      <---------AHL20(2)                    ----- ------->HSFC1(2)            <---------GLK1(2) <---------REM1(1)    ---------->DOF2     <----------DOF2 --------HSFC1(2)   <---------ZAT6 <---------TOE1(3) <---------AHL20(1)           ------>ZmHOX2a(1)--   aagcttggtttagtttggattagtgtaaaccgattttgaggttctaatgatgtagtatattttcttggtttaaagtactcgctcctatttcttttttatc  16559600                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                           <--------HAHB4                                                                                           -------->HAHB4                                                                                           <--------ATHB1                                                                                           --------->ATHB51                                                                     <------MYB46(1)       <---------ICU4                                                                     <------MYB83          --------->YAB1                                                                   <--------P             --------->AHL20(2)                                                                  <-------GAMYB           <---------YAB1                                                                --------->ALFIN1          <---------ATHB51                                 --------->YAB1                ------->MYC3               --------->ICU4                              <----------DOF2                  <-------MYC3             --------->YAB1                           <---------ARR11(3)           --------->At4g35610          <----------DOF2 -------->DAG2             --------->ARR11(3)        <---------At4g35610          <---------ARR11(3) ---->YAB1              <-----------GT1              --------->At4g35610          --------->ARR11(3) -------->DOF2       ----------->GT1              ---------->DOF2<---------MYB46(3) ------>ZmHOX2a(2)   aaaaagttctatattgctaacaagtgtaacatcttttataatcccttcaaattgaagcagccaaacgtggttgggcttacatatgatctttaataattat  16559700                                                                                                 <---                                                                                               ------                                                                                               <-----                                                                                               <-----                                   <---------YAB1                                              <-----                             <---------TOE2(3)                    --------->ARR11(3)          -------                          <---------AHL20(2)                      <---------ARR11(3)          <------                      --------->AHL20(2)                       <---------AHL20(2)         --------->WOX13(1)                     --------->AHL20(2)                        --------->AHL20(2)       <------ZmHOX2a(2) -->YAB1----------->RAV1(1) <-----------GT1            ----------->GT1               ------>ZmHOX2a(2) -->AHL20(2)         <---------AHL20(2)  <---------YAB1--------->ANAC58         xxxxxxxxxxxxxxxx>smallRNA(i) ---AHL20(2)   ----------->GT1--------->ZAT6           --------->ANAC58        <----------DOF2------- --YAB1--------->REM1(1) --------->YAB1--------->YAB1  <----------ID1   <----------DOF2<-------------   atatagactacaacataagataaataattttaacattacaattacaaatgtgtcgaaacgaaaaataaaatcttcttttagctttgatcgatcaattagg  16559800  Previous    Next  AGI:  At3g45190.1    Description:  SIT4 phosphatase-associated family protein. similar to SIT4 phosphatase-associated family protein [Arabidopsis thaliana] (TAIR:AT2G28360.1); similar to SIT4 phosphatase-associated family protein [Arabidopsis thaliana] (TAIR:AT1G30470.1); similar to SIT4 phosphatase-associated family protein [Arabidopsis thaliana] (TAIR:AT1G07990.1); similar to unknown [Populus trichocarpa] (GB:ABK95109.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21852.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain SIT4 phosphatase-associate Range:  from: 16552658    to: 16559263    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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