Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ZAT6                             --------->TOE2(3)                          ------->GAMYB -------->DOF2           <---------MYB111(2)       <---------ANAC58 --->ANAC58              <---------MYB55(2)        <---------ANAC58                                 < --->ANAC46              --------->MYB46(3)  <---------YAB1                                --------->TOE1(3) --->ANAC58             -------->P         --------->CCA1(2)                               <---------MYB59 --->ANAC55(2)         <-----------GT1    <---------ARR14(2)                         --------->AtMYB61 ----ANAC55(2)         --------->MYB52(1) --------->ARR14(2)         ----------------->AGL3--------->TOE2(3) ----GT1             <---------MYB52(2)  <------ZmHOX2a(1)   <---------AHL20(2)   <------ZmHOX2a(1)<-   ttatagccatgttcgaattgaaaactaaccacctaaaactagaggatatgatttcttatctattttttggtttcattttaagcaggaccaaaacctaaat  16536000        ----------------->AGL2       ------>ZmHOX2a(1)   --------->ARR14(2)   <---------ARR14(2)  <---------MYB52(1)                 --------->ATHB51--------->ICU4                            <----- <---------ATERF1(1)                <---------YAB1 ---------->DOF2 <-------TEIL---------->TaMYB80 <-- <---------DEAR3(2)      <---------AHL20(2)     --------->YAB1  <---------At4g35610            ------ ---------DEAR3(1)     <---------AHL20(2)      <-------TEIL     --------->At4g35610<-------TEIL<----- --------ANAC46 ----------->GT1     <---------AHL20(2)     ---------->DOF2  <---------ANAC46  <------   ggccggttcctccaaaactagttatattttttttttgtataattgcaaattcataaagatgaaaagagctgcattcttgggtatatacatgttaacatat  16536100                                                ----------->GT1                                         <---------ANAC46                                       <---------ARR14(2)                                   ----------------->AGL1                 ----------->RAV1(1)         <-------TEIL            --------->ANAC46                        --------->ANAC46        --------->CCA1(2)        --------->ANAC58                      --------->ANAC46  <----------DOF2                --------->ANAC58     ---------->DOF2 <---------ZAT18 ----ARR11(3)              <-----------HVH21   --------->MYB59        --------->ZAT18 --------DOF2         ------>ZmHOX2a(1)--------->ARR14(2) --------->AHL20(1) --->ARR11(3)      ------>ZmHOX2a(1)<---------------AGL15 --------->ARR11(3) ----ARR11(1)   --------->PCF5  <-------MYC3   --------->DAG2  <---------AHL20(2) ---CCA1(2)  --------->ALFIN1   ------->MYC3 <--------P   <---------ARR11(3)                  <------   ctttctttagatacagtggtcctcctatgcatcacatgcaatatcgggtaaggtcaaaaagatattgaattgtccacaacacataagaagttaagatgtc  16536200                                             -------->ATHB1                                             --------->ATHB51                                             --------->ATHB12                                            <---------YAB1                                          -                                            <---------AHL20(2)                                  <----                                            --------->ICU4                                      <----                             --------->ARR14(2)                                              --------               <---------ANAC46             <---------ATHB51        <---------RVE1(1)     --------->TOE2(3)          <---------DOF5.7(2)<---------ARR11(3)        --------->ANAC46          ----------->GT1-----        --------->DOF5.7(2)  <---------ARR14(2)        --------->YAB1        <---------TOE2(3)  ----- -----HVH21<---------TOE2(3)<---------CCA1(2)<---------ICU4         <---------CCA1(1)     <----------DOF2   actcgtggacattaacgtcgtagagtacccatatattcccatggaaattattggtattcgtaactcttggatatttttaaacgttgttaatactttaata  16536300             --------->ETT(2)             <---------ETT(2)      <---------AHL20(1)      --------->AHL20(1)      <---------AHL20(2) --------->AHL20(1) --------->ARR11(3) <---------AHL20(1) <---------ARR11(3) --------->AHL20(2)                            --------->AHL20(2)                      <------ZmHOX2a(1) <---------AHL20(2)                            --------->AHL20(1)              <---------GLK1(1) -------->AHL20(2)                             <---------AHL20(2)              --------->CCA1(2) -----AHL20(2)                --------->At4g35610             ----------->TBP --------->ARR14(2) -----AHL20(1)                <---------ZAT2  --------->AHL20(2)              <---------ARR14(2) ->YAB1 <------------CBF      --------->ZAT2  <---------AHL20(2)         <---------bZIP60(2)  ------- ---->AHL20(2)                <---------At4g35610             --------->AHL20(2) <---------YAB1*TSS ---->AHL20(1)   <---------MYB59            --------->YAB1----------->GT1<---------ANAC46     -------   aaatatattatattgtctaccgaatcaaacacagctgtatcaacaaaaataatttgaaacttgtataaatagatgaagtggatatgagaggaatgtaagc  16536400                   --------->ANAC55(2)       ----------->GT1                --------->REM1(2)                     <---------ZAT2 --------->HSFB2a(2)                ------>ZmHOX2a(1)                       --------->At4g35610    <- <---------HSFB2a(2)               <---------ANAC58                  <---------GLK1(2)        ------- -->ANAC58         <---------ANAC55(2)<-----------HVH21          ---------->DOF2<----------DOF2    -- -->ANAC58   --------->AHL20(2)    <---------ANAC58       ------->TEIL      <---------At4g35610    --   cttatagaagagaaaaaaaatatgtattgtagagagtccttgtcgagtctccagactttgaacgtagcaaagagtctcagctctttgttccctaaacaat  16536500                    <---------At4g35610                ------>ZmHOX2a(2)               <---------GLK1(1)                                                  <---------LBD16               <------ZmHOX2a(2)                                                <---------REM1(2)               --------->GLK1(1)                                                ----------->HVH21              <---------ARR14(2)                                         <---------WRKY38(1)         -------->P --------->LBD16                                  --------->MYB59       --------->MYB46(3)--------->SPL7                  --------->At4g35610   <-----------HVH21 --------At4g35610  --------->At4g35610 ------>MYB46(1)<-----------RAV1(2)<---------At5g28300 -->WOX13(1)  <-----------ARR10         ------>MYB83 --------->TOE1(3)   <---------WRKY12 ------->At4g35610<---------LBD16    ----------->RAV1(2) <---------At4g35610   <----------DOF2 ------->ZAT2 --------->ARR14(2)    -------->P       --------->TOE2(3) <-----------HVH21   cagctctcatcaacccgatctccgctggacgtcgaaacaacctgcctcgtccaaacctcagaagacgatgtaaggtcaccgcttcacgggctaatattga  16536600                                                        --------->MYB46(3)                                                   --------->ANAC55(2)                                              ----------->GT1             <---------HSFB2a(2)                                      <---------TOE2(3)--------->RAP2.6(3)--------->HSFB2a(2)                                     ---------->DOF2  --------->MYB52(1) <---------LBD16                ---------->DOF2<---------GLK1(2)   <---------ANAC55(2) <---------ARR14(2)         ---             --------->At5g28300   <---------YAB1 <-------TEIL         --------->ARR14(2)    <-------    ----------->GT1         --------->YAB1---------->DOF2------->GAMYB --------->GLK1(2)    ---------   acaagaaggtaacacagtgaaagaacccattcagaatattaaagtaaagggatacataacggcccaagaagagtttctggagggcataacttggtcgaga  16536700                               <---------ICU4                               --------->ATHB12                              <---------YAB1                              <------ZmHOX2a(2)                             <---------ARR11(3)                             <-----------ARR10                            <---------At4g35610                            --------->At4g35610                         <---------At4g35610                         <------NtERF2                        <-----------HVH21                        ----------->RAV1(1)                        ------>NtERF2                       <---------DEAR3(1)                       --------->ANAC46                      --------->At4g35610                                                      <-----                      --------->LBD16                                                          <-----                     --------->ANAC46                                                          <-----                    <---------LBD16                                              <----------DOF2                  <---------ARR14(2)                                            <---------DAG2<------                  --------->ARR14(2)                                        --------->ZAT18   <------                 <---------GLK1(1)                                          <---------ZAT18 ---------                 --------->GLK1(1)                                          <---------ZAT14<---------     ----------->HVH21<---------LBD16                                <---------ANAC58     --------->TOE2(3) ------>ARR11(3) <----------TaMYB80 <---------ANAC58                 <---------ANAC58   ---------->ID1 --HSFB2a(2)    ----------->ARR10   <---------ANAC58            ----------------------->TaNAC69(2) >ETT(2)     <---------ANAC46--------->ARR11(3)      <----------ID1  <---------ANAC46  <-----------GT1   ggtctcgatgacattgctgatatccgcggcagatcattgctcgtcgagcttattagcgccaagactgaccagcgtgagtacaccttttttttcctttaac  16536800                    <---------AHL20(2)         --------->AHL20(2)                                                        <-----------GT1 ----TOE1(3)        --------->AHL20(2)                                          <---------ICU4 ----------------WRI1<---------AHL20(2)                                   --------->ANAC58 ----TOE2(3)    --------->AHL20(2)                                        --------->ANAC58 -----GT1--------->YAB1      <-------TEIL   --------->AHL20(2)           --------->DAG2 ---DOF5.7(2)  <---------AHL20(2)           <---------AHL20(2)          ---------->DOF2          <--- >DOF5.7(2)   --------->AHL20(2)      --------->YAB1          ---------->DOF2  --------->ICU4    <--- -DOF2  <---------ATHB12    --------->CCA1(2)             <---------------------WRI1     <------ZmHOX2a(2)   gattttttcaatgaaatttaaaataaatagatacaaacatttgtaataaaactagaggccttagaaaagtccaaaaaagcaattgttaccgatctatgtg  16536900  Previous    Next  AGI:  At3g45140.1    Description:  LOX2 (LIPOXYGENASE 2). Identical to Lipoxygenase, chloroplast precursor (LOX2) [Arabidopsis Thaliana] (GB:P38418;GB:Q8W4E4;GB:Q9M1U5); similar to lipoxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G67560.1); similar to lipoxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G72520.1); similar to LOX3 (Lipoxygenase 3), iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Arabidopsis thaliana] (TAIR:AT1G17420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15101.1); similar to lipoxygenase 2 [Brassica nap Range:  from: 16536395    to: 16540337    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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