Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                              <------                                                                                              <------                                                                                            ---------                                     <---------------AGL15                               <---------ANAC46                               --------->YAB1                                            <---------ANAC58                            --------->WOX13(1)                                           <---------ANAC58     ---------->DOF2       ------>ZmHOX2a(2)                          ----------->GT1   <------------ -->MYB46(3)          <---------WOX13(1)   --------->YAB1    <----------ID1 <-----------GT1----------   atacaaaaaaagtctcttcataagattgatccatcaaaactaaaatcagaaacaacattcaatgagacaaaatcgaaataacaccttgaaggcgtgacga  16505300                                                                               <---------ICU4                                                                              <---------YAB1                                                                            --------->YAB1                                                                            <---------ICU4                                                                           <---------YAB1                                                                      --------->YAB1                                                                     <---------YAB1                                                                   --------->YAB1     --------->ANAC58                           --------->TOE1(3)  <--------HAHB4     --------->ANAC58  --------->ZAT18          <---------MYB59    <---------ICU4                 <-- ---------DOF2         --------->ZAT14          --------->TOE2(3)  --------->ATHB51             ----- ---ANAC58           --------->ZAT14        --------->ARR14(2)    <---------YAB1               ------ ---ANAC58         <---------------AtSPL8   <---------ARR14(2)    --------->ICU4             -------- >REM1(2)    --------->At4g35610         <---------ANAC46 --------->YAB1<---------YAB1       -------- -----------TaNAC69(2) <---------ZAT14   <---------ANAC55(2)--------->At4g35610--------->YAB1-------- ->HVH21     <---------At4g35610     <------ZmHOX2a(1)   <---------ATHB12--------->YAB1   <---------REM1(2)   gctttgcaacccataagctgaagagtactctgcaaaacaggacgcgtatacctaaacgaatcatctccattattatcatcatcatcaccttcttcacgca  16505400                               <---------ICU4                         --------->ANAC46                       ------>NtERF2                      --------->DEAR3(1)                     <------NtERF2                     --------->ATERF1(1)                    <---------ATERF1(1)       --------->ANAC46<---------ATERF1(1)     <-----------GT1<---------RAP2.3(1)                                                            <- -------ALFIN1      ------>NtERF2                                                                  -- -->TEIL           --------->DEAR3(1)                                                     --------->HSFB2a(2) --->ANAC46        <---------DEAR3(1)                                                    ------>ZmHOX2a(2) ->ANAC46         ---------->ID1                                                         <---------LBD16 ->ANAC58        <-----------HVH21       --------->ANAC46                               <------ZmHOX2a(2) ->ANAC58 <---------ALFIN1<-----------TGA1                                             <---------ARR14(2)   ccactatatacaacaccttcgtcgcctccgtcatcatctctatacaaaacaaaaacaaatctcacaaaattttcagagaaaattcaaacgatcgggaatg  16505500                                                                                                  ---                                                                                                  ---                                                                                                  <--                <---------LBD16                                                                  <---               --------->MYB52(1)      <------ZmHOX2a(2)                                      -------       ----------->GT1                --------->ARR14(2)                                     --------   --------->WOX13(1)                 <---------ARR14(2)            <-----------RAV1(1)    --------->YAB1 <------ZmHOX2a(2)                   --------->GLK1(1)      <----------ID1                <---------YAB1 --------At4g35610       ----------->GT1------>ZmHOX2a(2)   ----------->GT1        <---------TOE1(3)- ------->At4g35610--------->LBD16    <---------GLK1(1)  ---------->DOF2            <---------TOE2(3)-   cagatcaatcggtaacataccggagaagagaaaaatcggagatcggagaagttagagagaaagagaaaaactgttggaaaaatttagggtttataatgag  16505600                                                    <---------MYB46(3)                                              <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                           --------->ANAC46        <----------DOF2  <---------YAB1                     <---------CCA1(1)            <---------DAG2 ------>ARR11(3)                     <---------RVE1(1)         --------->ANAC58 ------>ARR14(2)                    --------->ARR11(3)         --------->ANAC58 -------ARR14(2)                    --------->AHL20(1)   <-----------HVH21 ---ZmHOX2a(1)       --------->YAB1 <---------ARR11(3)  <------MYB46(1)        ------->TEIL -->YAB1    >>>>>>>>>TBF1           <---------AHL20(1)  <---------MYB46(3)  --------->ANAC58 ->ICU4   ------------------------>ANAC81<-----------GT1<------MYB83        --------->ANAC46 ---------->GT1>>>>>>>>>TBF1   <------ZmHOX2a(1) <-----------RAV1(1)  --------------------->WRI1    - ----->ZmHOX2a(2) --------->YAB1  ----------->ARR10 <-----------RAV1(1)     --------->ANAC58    <----   gatcgtgataagaagaagaagaataagaagagaggaaagatattttcgccattgttgttggtcactcgcctttcttcaacgcatcgctcgaagagagcct  16505700                                               *TSS                                                <-                                             --------->ANAC55(2)                             ------>MYB83                                             ===================bZIP_DOF                     ------>MYB46(1)                                             <---------TGA1a                                ---------                                             --------->TGA1a                               --------->AtMYB61                                             --------->O2                                 <---------MYB52(2)               <-----------GT1               <---------O2   --------->ANAC46              --------->MYB46(3)              --------->ARR11(3)            <---------TOE1(2)                             <---------MYB55(2)          ---------->DOF2             <----------DOF2<----------DOF2                     --------->ANAC58          =============================================bZIP_DOF          --------->AHL20(2)------->GAMYB -------->ANAC46       <<<<<<<<<TBF1  =================bZIP_DOF          <---------YAB1  --------->ANAC58 -------HVH21 <---------ARR11(3)----------------------->TaNAC69(2)       <---------AHL20(2)==========   tcacgacttcttaaaagataccttcttcttctctctctctctttctcacgtttctcttttacacagacccaaaatataaatgtttgaactcaaccaacat  16505800            ---------->DOF2      <---------ANAC58    <---------GLK1(2)                               --------->GLK1(2)      <---------ANAC58    --------->ARR11(3)                  ----------->GT1  <---------DAG2          <---------ARR11(3)                  <---------ANAC46  =========================bZIP_DOF                           <---------ANAC55(2)     <---------ANAC58  <----------DOF2<---------TGA1a                      --------->YAB1  --------->YAB1  <---------ANAC58 ----------GT1   --------->TGA1a                      --------->TOE2(3)  <---------GLK1(2) -->RAV1(1) ===============bZIP_DOF         <------------CBF  <---------ANAC58        <-------GAMYB ==========================MYC_MYB      <------ZmHOX2a(2)     <---------ANAC58       <---------MYB46(3)   tttacttttcttgacaaagacgtccctagattttgtttttagatcaaattggtccatcttaatttcgtgaaattagaatctaatttttggttgccaactt  16505900                                   --------->AHL20(2)                                   <---------AHL20(2)                               <---------YAB1                              <---------AHL20(2)                   --------->TOE2(3)                                                               --               <---------AHL20(2) --------->AHL20(2)                                             ----              --------->AHL20(2)--------->YAB1                                                -------    --------->ANAC58          --------->AHL20(2)    <---------AHL20(2)                       --------    --------->ANAC58         --------->YAB1      ----------->GT1                           --------->ARR11(3)    --------->ANAC46    <---------ATHB12    ----------->RAV1(1)      <------ZmHOX2a(1) ---------->DOF2   gtttagaagcaagagattaaatctaaatcaattttaataaataatacaacatagtaaattagaaaattagaggatgaaatctaaaattgaaaagataaag  16506000                                           --------->AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(1)                                           <---------AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                       <---------AHL20(1)                                       --------->YAB1                                       --------->AHL20(2)                                       <--------ATHB1                                           <----                                       <---------AHL20(2)                              <---------GLK1(1)                                       <---------ICU4                                 --------->ARR11(3) --------->GT1                        --------->ICU4                                  <---------ARR11(3) ----->ALFIN1                ----------->GT1    <---------AHL20(2) <------MYB46(1)  --------->ICU4 -->DAG2           --------->DAG2   --------->YAB1                 <------MYB83  --------->WRKY18(1) -->DOF2          ---------->DOF2  <---------AHL20(2)            <--------P<----------DOF2   <-------   tgtgtgaatttaagagataataaagtagagggggtttttaataattttattttttttggttattttggtagggttttctttgggtcaagatttcagttat  16506100                                                                    <-------TEIL                                                                   --------->ARR14(1)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)        <--------         --------->DEAR3(1)               <-----------GT1         --------->ARR11(1)     --------->YAB1         --------->DREB2C(2)             --------->AHL20(2)     ----------->ARR10     ----------->GT1         --------->MYB46(3)             --------->AHL20(2)  --------->DAG2      --------->TOE2(3)        --------->DEAR3(2)         <---------At4g35610     ---------->DOF2      --------->TOE1(3)      <-----------GT1          <-----------HVH21        --------->ANAC58        --------->YAB1 ------ -----YAB1 ------>MYB46(1)  <----------DOF2             --------->ANAC58 <---------ARR11(3) --------- --MYB52(1)------>MYB83  --------->ARR11(3)             --------->ANAC46 --------->ARR11(3)--------->ICU4   tagaagtttcaccgactcatttgatcaggtctttgtcagcaatttaactatatgttacaagaaaagtagattcgatatctaaccataagtgtaataatct  16506200  Previous    Next  AGI:  At3g45090.1    Description:  2-phosphoglycerate kinase-related. similar to 2-phosphoglycerate kinase-related [Arabidopsis thaliana] (TAIR:AT5G60760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72472.1); similar to hypothetical protein OsI_009276 [Oryza sativa (indica cultivar-group)] (GB:EAY88043.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16794.1); contains domain SSF52540 (SSF52540); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300) Range:  from: 16501585    to: 16505747    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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