Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ARR14(2)             --------->ARR14(2)            <------NtERF2           --------->LBD16          --------->RAP2.3(2)          <---------ANAC46         <---------LBD16         --------->RAP2.3(1)                                                                        <         <------NtERF2                                                                        <------         --------->ATERF1(1)                                                                 <-------        <---------ERF1                                                                       <-------        <---------RAP2.3(1)                                                                  --------        ------>NtERF2                                                                        --------        <---------RRTF1(1)                                                                 <---------RAP2.3(2)        <---------ATERF1(1)                                                                <---------RAP2.6(2)       <---------RRTF1(3)                   <---------DEAR3(2)                             <---------DEAR3(1)       <---------RRTF1(2)                  <---------DREB2C(2)              <---------ANAC46<--------       <---------DEAR3(1)                 --------->DDF1                    <---------bZIP60(2) <----       <---------RAP2.3(3)        <---------ARR14(2)          <---------GLK1(2) ------>NtERF2--------       <---------RAP2.3(2)        --------->ARR14(2)  --------->MYB59     --------->MYB52(1)<-------- ------HSFB2a(2)                 <---------GLK1(1)   <-----------RAV1(2) ----------->TGA1--------->ALFIN1 ----->HSFB2a(2)                 --------->GLK1(1) <-----------HVH21     ----------->HVH21<-------TEIL   gagaaaatggcgccggaaactgatgcaactccagcatttccgatgtcggttttggtcaggtcgagattgtcgcgaatgacggggactagaggtgcggctg  16490100                                     ------>ZmHOX2a(1)                                    --------->TOE2(3)   --------->ALFIN1            <-------TEIL ---------AtMYB61             <------ZmHOX2a(2) ---DEAR3(1)                  ==============HOX2a_HOX2a --At4g35610                 <---------ARR11(3) --ZAT2<---------At4g35610   --------->ARR11(3) ->At4g35610           ---------->DOF2 ->ATERF1(1)     <xxxxxxxxxxxxxxxxsmallRNA(i) -RAP2.3(1) --------->ANAC58 --------->AGP1   <---------HSFC1(2)                        <---------DAG2 --NtERF2<---------REM1(1)  --------->GLK1(1) <---------HSFB2a(1)              <---------ANAC46 ->ZAT2--------->At4g35610<---------------------WRI1    <-----------RAV1(1)  <---------MYB46(3) -ATERF1(1) --------->ANAC58<---------GLK1(1) --------->HSFB2a(1)      --------->YAB1   <----------DOF2   cgaaggtggagatgaagcaagtgaagaaagagatccatcctaagtggaaggctctcatatgtggtttagcgaatgatagtggtttgaacacttttgccct  16490200                                                     <---------ANAC58                                                 --------->SPL7                                               ----------->HVH21                                               <---------SPL7                                          <---------MYB46(3)                 <------MYB83             --------->MYB52(2)                 <------MYB46(1)         <---------TOE1(2)  <---------REM1(1)               <--------P               <---------MYB52(1)--------->At4g35610        --------->ZAT14               ------>ZmHOX2a(2)   <---------At4g35610        <---------ZAT14           <---------MYB46(3) <---------ANAC58        <---------ZAT18         <---------MYB52(1)<---------DEAR3(1) <---------ARR11(3)     ---------        --------->ZAT18       <---------MYB46(3) --------->RAP2.6(3) --------->ARR11(3) <------ZmHOX2a(1)   atgttcggagtccactggtagggcaaacttagccgttggatcgtttgttcggacggcttgagatgaagggacatcttcttggacggagaaggagaagact  16490300                  --------->ANAC46                  --------->ANAC58       <---------RAP2.6(3)                  --------->ANAC58      --------->RAP2.3(2)                  --------->AtLEC2      --------->RAP2.3(3)          ----------->HVH21             --------->DEAR3(1)         --------->At5g28300       ---------->DOF2         --------->LBD16    <---------ARR14(2)                          ------>ZmHOX2a(2)        <---------ANAC58  <---------HSFB2a(1)                         <---------ARR11(3)        <---------ANAC46  <---------HSFC1(2)              <---------MYB46(3)        <---------ANAC58  --------->HSFB2a(1)          <---------MYB46(3)<----------DOF2 -->ARR10<-----------HVH21--------->HSFC1(2)  --------->ATHB12        --------->ARR11(3)        -----   tgctcccttgccgtgactccatgcaaggaggttccaatagagccgtcttcattagaatggttgtgagccattgatctttagttcaaagaaaatgggagaa  16490400                                                                ---------->ID1                                                              <-----------RAV1(1)                                                          <---------ANAC46                                                        <---------ZAT18                   <---------HSFB2a(2)                                                       ---------->ID1   --------------->AGL15                                                       <---------RAP2.6(2)       <---------REM1(1)                                                     <-----------RAV1(1)<---------------AGL15                           <---------TOE2(3)       <----------DOF2 *TSS<-----------------AGL2 ------>GT1           <----------DOF2         <<<<<<<<<TBF1 <----------DOF2    <---------ANAC46   gttaagagagagagagagaagagactttaaacgttgaagaaggttttcttcttctttgtggcctttgttgttttctgtttttggtgtaagttggagaaga  16490500                                        <---------ANAC46                                        <------MYB83                                        <------MYB46(1)                                       --------->MYB52(2)                                       --------->MYB59                                       --------->MYB55(2)                                       --------->MYB46(2)                                       <---------AtMYB61                                       --------->MYB111(1)                                    <-------GAMYB                                    <-----------HVH21                                 --------->SPL7                                 <-------TEIL                               <---------SPL7                               <---------ARR14(2)                              <------MYB46(1) <------ZmHOX2a(2)                              <------MYB83 <---------MYB46(3)                              <---------DEAR3(2)                             <---------------AtSPL8 --------->YAB1                             <---------------AtSPL3<---------ATHB12                             --------->MYB111(1)   <---------ATHB51                             <---------MYB46(3)------>ZmHOX2a(2)                             --------->MYB55(2)------------>CBF                         <---------AtMYB61--------->ALFIN1                    --------->ARR11(3) --------->MYB111(2)               <---------ANAC55(2)                    <---------GLK1(2)<---------MYB52(1)--------->YAB1    --------->ANAC55(2)    <----                    <---------ARR11(3)<---------MYB55(1)                 <---------ANAC46       <----             <---------AHL20(2)<---------PCF2--------->ARR14(2)     --------->ZAT6             <-----           <-----------TBP  <---------ANAC46 <---------ARR14(2)   --------->YAB1               <-----   tgagttgcatagtatttatagagatttttggtgggtacggttaggtggatccaataataagagttgaataatactacgtgaaatgaaatgagcgatggct  16490600                                        <---------AHL20(2)                                        --------->ATHB12                                       <---------AHL20(1)                                       --------->AHL20(1)                                       --------->AHL20(2)         <---------AHL20(2)            <---------AHL20(2)         <---------AHL20(1)      --------->ANAC58         --------->AHL20(2)      --------->ANAC46     <---------AHL20(2)          --------->ANAC55(2)             ---------->DOF2 -----DAG2<---------AHL20(2)     <---------ANAC55(2)          <---------ANAC55(2) ------DOF2                    <-----------GT1           --------->YAB1 ----ANAC58                 <---------ZAT6              <---------ATHB12               <---------REM1(1) ----ANAC58       ----------->GT1--------->ANAC58     --------->WOX13(1)<---------ANAC46        <----   ttttgttttaattttttttttggtgaaatagtattacgaaatttattggtagaaaacaatcaatatgtaaagtctcttgtacattttagatgtagtctct  16490700                                                           <---------AHL20(2)                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                  --------->AHL20(2)                                <                                                  <---------AHL20(2)                               <-                                                 <---------WOX13(1)                                --  <------MYB46(1)                             --------->ICU4                                  -------  <------MYB83                                ------>ZmHOX2a(1) ----------->GT1             --------- <---------TOE1(2)                      --------->DAG2 <---------AHL20(2)                   <-------- ------DOF2                            ---------->DOF2 --------->AHL20(2)     --------->REM1(2)    <-   ttgtaggtttttgcaaacgttttcaatagcaaaaaaaaaaaaaaagtcctgatttatttatatattttgttaataaactgtgttgagggtcgaagatagt  16490800                                                                     --------->YAB1                                                                   <---------KAN4(2)  --------->ANAC58 ---------AHL20(2)                                      --------->ANAC55(2)           <---------ANAC55(2) --------AHL20(1)      --------->At4g35610              <---------ANAC46              --------->ANAC58 ------->ARR11(3)    --------->YAB1                     <---------ANAC55(2)           --------->ANAC46 ---->GT1           <---------YAB1              ---------->DOF2 ------->GAMYB         --------->ANAC55(2) >ARR11(3)   <---------MYB59            <------ZmHOX2a(1)    <-----------GT1     <---------ICU4 -ARR11(3)   ------->GAMYB    <---------ICU4   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------GT1 --------ARR11(3) --------->YAB1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->At4g35610       -   atatattttctctaaccgaattatcagaagaaaaattacgaaggataagagaaagttcacgtataaccgaatgatcagaagaaaaattacgaaacgataa  16490900                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        <---------ZAT18                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                  <---------ANAC46                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <---------ANAC58                                  <---------ANAC58 --------->MYB52(1)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)              <---------ARR14(2)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ARR11(3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------ARR11(3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->ANAC46--------->MYB52(1)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ANAC58------>MYB83                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      --------->ANAC58------>MYB46(1)             <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------ZAT18    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       ----------->GT1 --------->ARR14(2)     --------->ZAT14    <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---------MYB59     --------->ZAT18    --------->TOE2(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->ANAC46     <---------ZAT14 <---------ARR11(3)<---------ZAT6   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->DOF2   <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->GLK1(2)   gagaaagttcactagcttttctttatctttaatctttcgtagtgcaaatatcaaaacggacaatttgacacgaaaaatctataccgaactgcatcatata  16491000  Previous    Next  AGI:  At3g45060.1    Description:  ATNRT2.6 (Arabidopsis thaliana high affinity nitrate transporter 2.6); nitrate transmembrane transporter. similar to ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G08090.1); similar to ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60770.1); similar to ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16790.1) Range:  from: 16488546    to: 16490467    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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