Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ATHB12 ----->GAMYB ------>MYB46(3) -------MYB52(2)                   --------->ZAT6 --->ANAC46                       <---------TOE2(3)                              <-------TEIL ->ANAC46               ------>ZmHOX2a(2)                       <-----------GT1 <----------DOF2 -ZAT14               <---------ARR11(3)                   ---------->DOF2    <---------At4g35610 >ZAT14               --------->ARR11(3)          ---------->DOF2<---------At5g28300    <---------WOX13(1) -REM1(2)          <---------TOE2(3)--------->TOE2(3)    ----------->HVH21    --------->At4g35610----   acaaacaaatcaaaccatgttaatgatctaaatactaacattagcccaatacaaaagctgtgaaagttaccatcttgttcagcttcatggattgaaatag  16486300                                                                            --------->LBD16                                                                           <---------ALFIN1                                                                           --------->DEAR3(1)                                                                         ------->TEIL                        <---------YAB1                                  <---------ALFIN1                      <---------GLK1(1)                    <---------ARR11(3)              --------->MYB52(1)                    ------>ZmHOX2a(1)  <---------ABI4(2)            <---------MYB59                    <---------At4g35610    --------->ANAC58      --------->At4g35610   --------->MYB52(1) --------->At4g35610    --------->ANAC46      <---------At4g35610--------->YAB1        --------->ZAT2         --------->ANAC58   ---------->DOF2   --------->ARR11(3)        <---------ZAT2 <---------LBD16              <---------HSFB2a(2) ----->ARR11(3)      <---------ARR11(3)  <-----------HVH21 --------->ARR11(3)              --------->HSFB2a(2)   ctcttgaaagctgaactaacttagatatcataacagaaggaagtgtcacagctcctagtaatatccctgaagacgcaccgcgtctacaattttccaaaac  16486400                                                                                               ------                                                                                               <-----                                                                                          <---------LBD16                            ---------->DOF2              ------>ZmHOX2a(2)               ----------->RAV1(2)                --------->ARR11(3)             <---------GLK1(2)              <---------TOE2(3)<-----                <---------ARR11(3)      <----------DOF2 <------ZmHOX2a(2)     <---------TOE1(3)------   aaacacatcttcaattgaaatcttcttcccaaaagattgaaactttattgattctgagatcggaattttgaaattagattaagggtttttcacctggagc  16486500                                     ================HOX2a_HOX2a                                     ------>ZmHOX2a(2)                                     ==================================HOX2a_HOX2a                                     =====================================HOX2a_HOX2a                                    --------->GLK1(1)                                    =================HOX2a_HOX2a                                    <------ZmHOX2a(2)                                    ===================================HOX2a_HOX2a                                   --------->ARR11(3)                                   <---------ARR14(3)                                   <---------ARR11(3)                                   --------->ARR14(2)                                   <---------ARR14(2)                                   <---------AGP1                                   --------->ARR14(3)                                   <-----------ARR10                                  <---------CCA1(2)                                  <---------ARR14(1)                                                <             --------->ARR14(2)<---------LBD16                                              <-------- --->At4g35610             ----------->HVH21         <------NtERF2            --------->ANAC58     -- ----At4g35610--------->MYB52(1) --------->LBD16   <---------ANAC46           --------->ANAC58    --- ----ZAT2    <---------ARR14(2)------>NtERF2      <---------LBD16  <------ZmHOX2a(1)        --------- --->ZAT2  ----------->ARR10 <---------REM1(2)<------ZmHOX2a(1) <------ZmHOX2a(1)      <----------ARF1   tgaaatgagagagaagaaacggagaagtctcgacgcggatctcgacgaggaaggcggagagagagaggaggaagagggagaagccatgggagataagtga  16486600                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                         <---------ATERF1(1)                                                                         --------------------->WRI1                                                                         ------>NtERF2                                                                        --------->DEAR3(1)                                                                       --------->RAP2.3(1)                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                      <---------ATERF1(1)                                                                      <---------RAP2.3(1)                                                                     <---------DEAR3(1)                                                                     --------->DEAR3(1)                                                                    --------->ATERF1(1)                                                                   <---------ATERF1(1)                                                                   <-----------HVH21                                                                  --------->bZIP60(2)                                                                  <---------bZIP60(2)               -                                                                  <---------bZIP60(1)               <         --------->CCA1(2)                                        <---------DEAR3(1)               --       --------->CCA1(2)                                          <---------O2                     <- ---------TOE2(3)                                                 --------->bZIP60(1)    <------NtERF2 -ANAC55(2)                  --------->ANAC46                     --------->O2          --------->LBD16 ------->DAG2      <----------ID1                                 --------->TGA1a      --------->DEAR3(1) ------->DOF2   <---------ARR14(2)                    --------->ANAC46------>NtERF2   <---------LBD16 >ANAC55(2)     --------->ARR14(2)       --------->REM1(1)        <---------TGA1a   --------->DEAR3(1)   taaaggaagagataagagaatacgagaaaccacgacgaaaactacaactctctctcccgttacaaacgacgtcgccgtcgtcttcatcgccggagaagat  16486700                                                                         ------>NtERF2                                                                         ----------->RAV1(1)                                                                      <---------RAP2.6(3)                                                                      <---------ATERF1(1)                                                                      <------NtERF2                                                                      ------>NtERF2                                                                     --------->RRTF1(2)                                                                     --------->DREB2C(2)                                                                     --------->RRTF1(3)                                                                     --------->RAP2.3(3)                  ---------->ID1                                     --------->ANAC58               <-------TEIL                                          --------->DEAR3(1)              --------->ARR14(1)                                     --------->RAP2.3(2)             --------->ARR14(2)                                      <---------ATERF1(2)            <---------HSFB2a(1)                                      --------->ATERF1(2)            --------->GLK1(1)                                        --------->ANAC58<---------ANAC58            <---------GLK1(1)                                       --------->ATERF1(1)             -            --------->HSFB2a(1)                               <------------CBF       <---------ANAC46           ----------->ARR10                                 --------->ATHB12   --------->ANAC55(2) <          <------NtERF2                               <-------GAMYB --------->ERF1----------->HVH21 <         --------->LBD16                             --------->MYB52(2) --------->DEAR3(1)          <        --------->DEAR3(1)                           <---------MYB46(3)<------NtERF2 <---------ANAC58       <---------LBD16<----------DOF2    <---------YAB1---------->ID1--------->RAP2.6(2)            < -------->ATHB12  <---------MYB52(1)    --------->KAN4(2)   <---------AHL20(2)  <---------ANAC55(2) < ---------ICU4--------->GLK1(2)       *TSS         <---------ANAC46 <---------RAP2.6(2)             < ------->ICU4<---------GLK1(2)------>NtERF2      <---------MYB46(3) --------->RAP2.3(1)        <----- --------YAB1<---------ARR14(2)<------NtERF2     --------->MYB55(2)<---------ATERF1(1)       <-------   gatgatttcgccggagattcgttgttttaaggcgcgattgtttattcttggtggtttgttgttttattgggccgccaacaaaacgtgacttgtatgtaat  16486800                                                                ------------>CBF                                                          <---------YAB1     --------->ANAC58                                   -------->HAHB4     --------->ANAC46                                   --------->YAB1     --------->ANAC58                             --------->bZIP60(2) --------->TCP15(2)                               <---------ANAC55(2) -------->PCF2                       --------->ANAC58  ----------->GT1 ---------TCP11(2)                   --------->ANAC58  --------->ICU4 ---------TCP20                      --------->ANAC46  <---------YAB1 ---------TCP15(1)             <---------TOE2(3)  --------->ANAC46 ---------TCP16(1)             <---------TOE1(3)  --------->ANAC55(2) ---------ZAT18            <----------DOF2        --------->ANAC55(1) ---------PCF5        --------->ANAC58            --------->ANAC58             ----------->ARR10 -------CBF           --------->ANAC58       <-----------GT1---------->DOF2<------MYB83<---------MYB52(1) --AHL20(2)    <---------MYB52(1)<-----------HVH21--------->ANAC58         <------MYB46(1)    <------   tgggcccacgaaacacggtttggcacggactttaaggtcacgctaattttccacgtaatgataaaagtcaatttgttcggtttgattcggtttgttttgg  16486900          <------------CBF         <---------MYB46(3)        <---------MYB52(1)       <-------GAMYB      <---------DEAR3(2)                                                                          <--      <---------MYB46(3)                                                  <------ZmHOX2a(1)      <---     <---------ANAC46                                       <---------DOF5.7(2)         <---------YAB1     <---------DREB2C(2)        <---------MYB52(1)  >>>>>>>>>TBF1     --------->ICU4  --------->YAB1  <-----------RAV1(1)<---------ARR11(3)            *TSS     --------->MYB52(1)       --------->ICU4 ---AtMYB61          --------->ARR11(3)    <----------DOF2--------->ARR11(3)         ----------->GT1   tttaatgtcggttattgaaattagattttaagccgttgagagagactttgtgaagaagaagataacgaagtcatgaggatgagagaaatgataattcttc  16487000         --------->At4g35610         <---------At4g35610     <----------DOF2               --------->At4g35610     <---------REM1(1)  <---------ZAT2<---------ANAC58         <---------At4g35610  <---------YAB1        --------->ZAT2<---------ANAC58         <---------ZAT2      ------>ZmHOX2a(1) -----GAMYB             --------->At4g35610               --------->ANAC58 --------->TOE2(3) --------RAV1(1)        <---------At4g35610               --------->ANAC58 --------->TOE1(3)   tgttgtgatggagcttagtctcatcaagctgcaatctttttcgttcccttcttcagtttcaagtaagctgaacaaaaccctaatcctcgattttgttttg  16487100                                                                         --------->ANAC58                                                                         --------->ANAC58          --                   --------->ANAC58                                     --------->DAG2            <--                   --------->ANAC58                               ----------->GT1   <---------ANAC58                  ---------->ID1                                <---------ANAC46    <---------ANAC58             --------->GLK1(2)    <----------DOF2            ----------->HVH21   <----------DOF2-----    <---------LBD16--------->ANAC46               <---------At4g35610  ---------->DOF2         <-----   ttttctctcggagagaatttgacgcaattctatgagcttttgatggtttttgacctgagaaatttgacgggcaaaaagcaaaactttcttggtatttctg  16487200  Previous    Next  AGI:  At3g45040.1    Description:  phosphatidate cytidylyltransferase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO16781.1); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) Range:  from: 16483647    to: 16486738    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g45050.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO16789.1) Range:  from: 16486951    to: 16488344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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