Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                <-----------GT1                                                        <-----------GT1               --------->YAB1                                                       <---------AHL20(2)              <---------YAB1                                                     <---------ARR11(3)           <---------AHL20(2)                                                    <---------AHL20(1)           --------->AHL20(2)                                     <-----------GT1--------->AHL20(1)           --------->AHL20(1)              <-----------GT1        --------->YAB1 --------->ARR11(3)          --------->AHL20(2)           <-----------GT1         <---------ICU4  --------->ARR11(3) ---          <---------AHL20(2)          <---------YAB1           --------->YAB1  <---------AHL20(1)----      <---------AHL20(2)              <---------AHL20(2)      <---------YAB1   --------->AHL20(1)----   ----------->GT1      <---------AtMYB61<---------YAB1     --------->YAB1     <---------ARR11(3)---- --------AHL20(2)<---------YAB1  <---------AHL20(2)  ---------->DOF2     ----------->GT1     --------   atttatagttaattttattatcagttttggtctatttttttttattatccagtctgaaagtttgataataacagtttgaaaaatatttttttctattatc  16476900                              <---------WOX13(1)                             --------------------->WRI1     <---------------------WRI1                                <------NtERF2   <---------AHL20(2) ----YAB1                   --------->ATHB12                XXXXXXXXXXXXXXXXXXXX>MIR851-3P --->ZmHOX2a(1)      <---------YAB1                        --------->ZAT2   --------->AHL20(2) ----->TOE1(2)     --------->YAB1                  <----------DOF2         --------->AHL20(2) ----->TOE2(3)    --------->ICU4                   <---------DAG2 --------->ANAC58 ----->TOE2(2)  ---------->DOF2                   <---------DAG2  --------->ANAC58           <------- ->YAB1--------->LBD16     <---------YAB1   --------->AtMYB61--------->ALFIN1  --------->AHL20(2)   ctaagagtccgaaaaatataaagatgattttcattgattctagcgaccattacctttttcgaggtggcaaacaaaaaataaaaaattgacaaatttttca  16477000                                                               --------->AHL20(1)                                                               <---------AHL20(2)                                                               --------->ARR11(3)                                                            --------->YAB1                                                           <---------YAB1                                                       <---------DAG2                    --------->AHL20(2)              <-----------GT1                    <---------AHL20(2)           ----------->GT1                    --------->AHL20(1)      <---------AHL20(2) <---------AHL20(1)             -------                    <---------AHL20(1)     --------->AHL20(2)<---------AHL20(2)               <------                   --------->AHL20(2)      <---------AHL20(2)<---------AHL20(1)        <---------ZAT18                   <---------AHL20(2)<---------TOE2(3) <----------DOF2                 --------->ZAT18      ----------->GT1           <----------DOF2  --------->ANAC55(2)         <---------MYB52(1)   --- ----GT1     ----------->GT1<---------GLK1(2)    <---------ANAC55(2)   ------>ZmHOX2a(2)    ---------   tttttgtaaggcaaattgtaaataaattcaaattcttttaagaaattaaataagtaactttataatattttgatccacagtttgtttagtagactaacaa  16477100                                                                                                  <--       --------->AHL20(2)                                                              <-----------GT1       <---------AHL20(2)                                                           ----------->GT1<- ------>MYB83            <---------ANAC46                                           --------->ANAC55(2) ------>MYB46(1)         <---------ANAC58                                 <---------ARR14(2)      --- -->MYB46(3)             <---------ANAC58                                 --------->ARR14(2) -------- ---MYB52(2)--------->AHL20(2)                                         <---------TOE2(3)  <---------DAG2 ------>MYB46(3) --------->YAB1                 ----------->GT1    <----------DOF2  <---------ANAC55(2) >MYB52(1)  <---------AHL20(2)       ---------->DOF2   --------->AHL20(2)<------ZmHOX2a(1)<----------DOF2   accaactatataaataaaatcatcgtttcttgaatcccataaacccaaaattgtaaataaaacaaaatgcttttaggatactaaataagtaactttttaa  16477200                                --------->ANAC58                                --------->ANAC58       ------>ZmHOX2a(2)    --------->ANAC58 -------AHL20(1)            --------->ANAC58    <-----------GT1 --------YAB1       <---------ANAC46         --------->ANAC55(2) ------>AHL20(1)  <---------ZAT14            --------->ANAC46              *TSS                  >>>> ->AHL20(2)       --------->ZAT14        ----------->TBP       ------------>CBF   <---------GLK1(2)   tatttttgatccacgatttgtgtagtagacaaacaaggcaactatataagtaacatcatcgtttcttcaatcccataacccaaaaattctctcacagaaa  16477300                                                    <---------YAB1        --------->ANAC46        ---      --------->AHL20(2)  <----------DOF2          <-----------GT1    <-----------GT1      ---------- >>>>>MYB2                <---------DAG2   ------>ZmHOX2a(1)        <-----------GT1  <---------CCA1(2)   accaaaaaaaaaatggactccaaaacaacttttctcacatttctcctctgtattttcattttctctcatttttcaccctcaacttccaaatctctgacag  16477400                                                                                        --------->TGA1a                                                                                        <---------TGA1a                                                                                        <---------O2                                                                                        --------->O2                                                                                        --------->bZIP60(2)                                             <---------DEAR3(1)                         <---------bZIP60(1)                                             <---------ANAC46                           <---------ANAC46                                            <---------LBD16                             --------->bZIP60(1)                      ------>NtERF2       --------->ANAC46                           ----------->HVH21                      <---------DEAR3(2)  ===============================================MYC_MYB                     <---------At1g77200  ============================bZIP_DOF     --------->ANAC58                     <---------DEAR3(1)   <---------TGA1a                          --------->ANAC55(2)                   <-----------HVH21      --------->O2                             --------->ANAC46                  --------->DEAR3(1)      --------->TGA1a                          --------->ANAC58          ==========================================bZIP_DOF                     <---------ALFIN1      <---------CCA1(2)                   <---------O2     ---------->DOF2      -------->P     <-----     <---------MYB52(1)<------NtERF2     <---------LBD16   =======================================bZIP_DOF ------->DOF2   <---------At5g28300    ----------->HVH21 <---------YAB1         ==================MYC_MYB ->HVH21  <----------DOF2         ------>NtERF2<------NtERF2   <------ZmHOX2a(1)<---------REM1(2)   aaaagcccttatctttctcaccgtcggcgagtttgccgactctcacggcggagagacttatcaaaggattcaatttgatgcctacacgcgacgtcaatgt  16477500                                                                <---------WRKY18(1)                                                               --------->WRKY12                                                               --------->WRKY38(1)                                                               ----------->HVH21                                                             <-------GAMYB                                                             ===================MYC_MYB                                                            --------->MYB55(2)                                                            <---------DEAR3(2)                                                            <---------MYB46(3)                                                           <---------ANAC46                                                           <---------DEAR3(1)                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         ------>NtERF2<---------ANAC46                                                         <---------RAP2.6(1)                                                         <---------ATERF1(1)                                                         ------------>AtMYB77                                                         <---------ORA47(2)                                                         <---------RAP2.3(1)                                                         <---------DEAR4(2)                                                         <---------ERF1                                                         <---------RRTF1(1)                                                         =======================MYC_MYB                                                        <---------RRTF1(3)                                                        <---------ATERF1(2)                                                        <---------RAP2.3(3)                                                        --------->DEAR3(1)                                                        <---------DEAR3(1)                                                        <---------RRTF1(2)                                                        <---------RAP2.3(2)                                                        --------->ATERF1(2)                                                       --------->ATERF1(1)                                                       <---------ABI4(1)                                                       --------->RAP2.3(1)                                                       <------NtERF2  --------->TGA1a                                                      <---------ORA47(2)                                                      <---------ERF1  <---------O2--------->MYB55(2)                                                      <---------RAP2.3(1)         <---------MYB46(3)                                                      --------->LBD16 <---------TGA1a                                                      <---------ATERF1(1)        <---------AtMYB61                                                      <---------RRTF1(1)         --------->ALFIN1                        --------->LBD16               ------>NtERF2   --------->O2--------->ABI4(2)                      <------NtERF2                  <---------DEAR3(1)         <---------MYB52(1)                    --------->ARR14(2)               --------->ATERF1(2)       --------->LBD16                    <---------ARR14(2)               <---------ATERF1(2)     <---------LBD16                  <---------ATERF1(1)                <---------RAP2.6(2)     <-----------RAV1(2)          <---------HSFC1(2)                         <---------RAP2.3(2)     <------NtERF2  <--------          --------->HSFC1(2)                         <---------DREB2C(2)   <---------PCF2  <---------MYB52(1)          <---------HSFB2a(1)                        <---------RAP2.3(3)   --------->ARR14(2)<-------          --------->HSFB2a(1)                        <---------RRTF1(2)    <---------ARR14(2)<------- ------HVH21--------->GLK1(2)    --------->ETT(2)   <---------LBD16 <-----------HVH21     <----------   catcgatgaagaaggttctgaggctccgagactggtcgagagagcattcgatttgccggcggcggttgaccgtcgtggctccggtggttctccgtcggtt  16477600 <---------GLK1(2) --------->ARR11(3)                                                               <-----------GT1 <---------ARR11(3)                                                      <---------LBD16 <---------ARR14(3)                                                <---------ANAC58 --------->ARR14(3)                                                <---------AtLEC2                 - -DEAR3(1)                                              <---------HSFC1(2)      --------->AHL20(2)<-- --MYB46(3)       <---------MYB46(3)                    --------->HSFC1(2) --------->LBD16     ------ --DEAR3(2)       ----------->GT1         ---------->DOF2          <---------ANAC58          <------- -HVH21        <---------ZAT2     <---------MYB59   ----------->GT1<---------ANAC46        --------->WOX13(1)   caagattttggtcaccatgctggttactacaaactccctaactcaaaagcagcaaggtaacttccatttgcttgtaccggaattaaaccggttcaatcaa  16477700            <---------GLK1(2)                                                          --------->AHL20(2)            --------->ARR11(3)                --------->ZAT18                     <---------AHL20(2)       <----------DOF2             --------->LBD16                            ----------->GT1 -------->LBD16            <---------MYB52(1) <---------ZAT18             ------>MYB46(1) -------LBD16           <------------MYB.PH3(1)                           --------->ANAC46 --->WOX13(1)         <-----------GT1     ------>ZmHOX2a(1)               ------>MYB83 <---------AHL20(2) --ATHB12   <---------ARR11(3)   <---------LBD16              XXXXXXXXXXXXXXXXXXX>MIR158A   tccggtttactttagattttcttctaaccgtttcatccggcttcctagttcacaattgttttcacaaatatagaccaagccggtttaatttaaatttttc  16477800  Previous    Next  AGI:  At3g45010.1    Description:  SCPL48 (serine carboxypeptidase-like 48); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 48 precursor (SCPL48) [Arabidopsis Thaliana] (GB:Q56WF8;GB:Q93ZC3;GB:Q9LXH4); similar to SCPL47 (serine carboxypeptidase-like 47), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G22980.1); similar to SCPL49 (serine carboxypeptidase-like 49), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G10410.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76135.1); similar to Serine carboxypeptidase [Prunus mume] (GB:BAE48666.1); similar to putative serine carboxypeptidase precursor [Gossypium hirsutum] (GB:AAL67992.1) Range:  from: 16477275    to: 16479974    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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