Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->TOE2(3)                   <---------ANAC58                     <---------ICU4                   <---------ANAC58                     --------->ATHB12          --------->AHL20(1)                            --------->ATHB51          <---------AHL20(2)                           <---------YAB1          --------->AHL20(2)              --------->ARR14(2)                                    XXXXX          <---------AHL20(1)      <---------ARR14(2)   --------->ICU4                        <-------         --------->AHL20(2)       --------->ARR14(2) --------->YAB1                  <---------WRKY18(1)         <---------AHL20(2)      <---------CCA1(2)<----------DOF2                   --------->WRKY38(1)     --------->AHL20(2) <----------DOF2   <---------ARR14(2)                        --------->WRKY12 ----------->GT1   --------->ATERF1(1)<-----------------AGL1           ---------->DOF2      ---------   agtaagaaaaaataaatttgggcctgccttaatgcctatctccaaatttgggctttcattattggtgaaacgaagaagcccaaatgttgacctattttat  16470900                                                  <----------DOF2                     ---------->DOF2            <----------DOF2                  <---------------AGL15       <---------ZAT18 XXXXXXXXXXXXXXX>MIR419----------->GT1        --------->ZAT18 --AHL20(2) <-------TEIL                    <---------RAP2.3(3)       <-------TEIL              <---- >AHL20(2)  --------------->AtSPL3     <----------DOF2         <---------AtLEC2   <----------DOF2   aaacactgaaaacattcgtactcaaaagtgaaattttaaaactttgagggctctttgtcaattgttcatggattcatcttctctctttgaagtttgaact  16471000                                                  ----------->GT1                                                <------------CBF                             ---------->DOF2--------->HSFB2a(2)               --------->GLK1(2)         <----------DOF2                      ---------->DOF2 ------DOF2   <---------GLK1(2)     ---------->DOF2       --------->YAB1----------->GT1            --   ttgaactgaagaaacagaatttgaaatgatacaaagttcaaagcttttggaattgcaaaatcaaaagtttcaagaagtaagaaagaaatgaagagagtga  16471100                                                        --------->TOE1(2)                                                      --------->ANAC58          --------->At4g35610                      ------->GAMYB          <---------LBD16                         <---------MYB52(2)          <---------At4g35610          --------->HSFB2a(2)                         <----------ID1       ---------->DOF2                 <---------HSFB2a(2)                   <------------CBF     <----------DOF2              <---------HSFC1(2)  --------->ANAC58  --------->LBD16            <-     <---------------AGL15        --------->HSFC1(2)---------->DOF2    <---------ANAC58            <-  --------->GLK1(2)            ---------->DOF2    --------->ANAC58     --------->ANAC55(2)        <-- --------->ARR14(2)        --------->ANAC58       --------->ANAC58     <---------ANAC58          ---- <---------GLK1(2)         --------->ANAC58<---------WOX13(1)     <---------ARR11(3)             <--- <---------ARR14(2)      ------>ZmHOX2a(1)--------->ARR14(2)      --------->ARR11(3)             ---- --------->ARR10       ------>ZmHOX2a(2)  <------------CBF <---------YAB1----------->HVH21       ----   tcagattctttaagcggaagtctgatcctaagcaaaagcttcgagattggcaacgaaagctacgataagatgtccgtgacattgaacgacaaattcgagg  16471200       <----------DOF2       <---------DAG2      <---------ANAC58      <---------ANAC46      <---------ANAC58   ---------->ID1                                                             --------->ATHB12 <-----------RAV1(1)                                                         <---------YAB1 --------ANAC58                                                    --------->MYB52(2) --------ANAC58                       <------ZmHOX2a(1)            --------->MYB59--------->AHL20(2) -----TEIL <-----------GT1     --------->GLK1(2)                   ----------->GT1<---------AHL20(2) ----->GLK1(2)                <---------ARR14(2)                 <---------MYB52(1)  <------------CBF ------ARR14(2)               <---------GLK1(2)                 ------------>MYB.PH3(2) --------->ATHB12 ----->ARR14(2)               --------->ARR14(2)         <------ZmHOX2a(1)   --------->ICU4       <-- ----->ARR11(3)             ----------->ARR10          <---------TOE2(3)   --------->YAB1         <--   ttcttgttgcttttttctcttgtatttgatcagattcttaggaaagtttcgaaatttgaggaatttagttagttatatgatgatttatattgatgggttt  16471300                                                         --------->ANAC58                                                         --------->ANAC46                                                         --------->ANAC58                    <---------DAG2                      --------->SPL7                ------------>CBF                      --------->TOE1(2)              --------->AGP1                          <---------SPL7              --------->ARR14(2)                     <---------ANAC58              <---------ARR14(2)                     <---------ANAC46              --------->ARR11(3)                 <---------ANAC58              <---------ARR11(3)            ----------------------->TaNAC69(2)          ---------->DOF2              <---------TOE2(3)<---------TOE1(2)                        <---     <---------TOE2(3)                ---------->DOF2<---------ANAC58                          <----- -------TOE2(3)--------->CCA1(2)    <---------YAB1<----------DOF2<---------ANAC58        <---------TOE1(3) -------TOE1(3)<------ZmHOX2a(2) <---------YAB1  <---------ANAC58<---------ANAC58        <---------TOE2(3)   agggttttagattaaagatccaatttttgagaatgactattaaagtatgttcctttcgtacgaaattgcttcaatttgataatttggatttagggtttag  16471400                                         <---------ARR14(2)          <---------TOE1(3)              --------->ARR14(2)          <---------TOE2(3)              <---------ARR11(3)                                         -     <------ZmHOX2a(1)                   --------->ARR11(3)                                  <-------   <---------TOE2(3)               <----------DOF2                    ---------->DOF2      --------->DAG2 ------ZAT6                       <---------ANAC58                <-------TEIL ---------->DOF2     -- ----ANAC46                       <---------ANAC58      ---------->DOF2--------->DAG2     ---------->DOF2   tgtttgaggattagggtttatactgagtgagagtttgctttcagatattgagagagaagaaagaaatgtgcataaagctatcaaagactcggtaaagcgg  16471500      <-----------HVH21     <------MYB46(1)         ------->TEIL     <------MYB83    --------->DAG2    --------->MYB59 ---------->DOF2           <---------YAB1                                    <---- -------->ATHB12 ----------->GT1<----------DOF2                                                 <---- --LBD16        <---------TOE1(3)          <---------ARR14(2)                ---------->DOF2    <---- ------->ICU4   <---------TOE2(3)   <---------YAB1             --------->ARR11(3)           <--------   aatgatttggtcactgctaaggtaaagtatgaaactttattagtaaatctgattcaatggtggaagaaattggagtttttaaagtgtttctctgctttgt  16471600                                                <---------At4g35610                                             ---------->DOF2              <---------ANAC58            ----------->GT1               ----------->GT1           ------->PIF5                --------->MYB52(1)               --------->At4g35610   ---------->DOF2               --------->HSFB2a(2)                    --------->ZAT2 -----ANAC58  <---------ANAC58   <---------HSFC1(1)                     <---------At4g35610 -----ANAC46 --------->STY1(2)   <---------HSFB2a(2)             --------->DAG2                  <--- -----ANAC58 <---------STY1(2)   --------->HSFC1(1)  <----------DOF2  <-----------RAV1(2)   ------->TEIL --DOF2    <-------PIF5          >>>>>>>ZML2<---------MYB52(1)  ---------->DOF2      <---------AHL20(2)   gtgtttaaaggcacttgctagggaaatagtgagttctagaagaacggttaagcggctatacgagaataaagcgcaggtgaattctatttcaatgcatctt  16471700                                                                                <---------ANAC58                         <----------DOF2                                        <---------ANAC58                    ---------->DOF2                                             --------->ANAC55(2)<-               -------->HAHB4           <---------YAB1              <<<<<<<<<RAP2.2         <--------               --------->YAB1      <---------MYB46(3)              <---------TOE2(3)  <----------DOF2              <---------YAB1 <---------ANAC58       <---------ANAC55(2)        <---------TOE2(3)   -- ------LBD16  --------->ICU4 <---------ANAC58       --------->ANAC55(2)       <-----------GT1      <-   ggggagagtattggtaatgatcaaaagctttacttggtggttttcattgttgttatgtgatatgttttttagattgttgtttacgtttctttttgtgttg  16471800  Previous    Next  AGI:  At3g45000.1    Description:  VPS24.2. similar to VPS24.1 [Arabidopsis thaliana] (TAIR:AT5G22950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16765.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 16471333    to: 16472392    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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