Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ---------->DOF2                <----------ID1                                                       ----------->GT1    <---------YAB1                                                                  --------->DAG2    ------>ZmHOX2a(1)                                                              ---------->DOF2   --------->TOE2(3)                                                            --------->At4g35610  =================================HOX2a_HOX2a                              <-----------HVH21  ------>ZmHOX2a(2)                                             ------->GAMYB   ----------->GT1 <------ZmHOX2a(2)         <---------ANAC58                  =============================RAV ---------ARR14(2)         <---------ANAC58                  ----------->RAV1(1)<---------ANAC55(2) -------->ARR14(2)  ---------->DOF2                        <---------At4g35610 --------->MYB59 ----->ALFIN1---------->DOF2------>ZmHOX2a(1)              --------->At4g35610<-----------RAV1(2)----   tggatccttattctgaaaagaacaaaggtccttgccaagaacaaatgagagacgattttgcagcaacagcatatgagaagtcaggtaaagtaaagtttcc  16326700                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <---------ANAC58   -----            --------->ARR14(2)                   ------>ZmHOX2a(1)          <------NtERF2      ------            <---------ARR14(2)          ---------->DOF2            ------->TEIL   <---------ANAC46 -->ZmHOX2a(1)                         ------>ZmHOX2a(1)<---------YAB1  --------->ZAT2      ---------   tctattctcatgtgtatatgctcaattctcatgtattcttcctaaagtttcctctattctcatttgatgagcctaggtggcttggcttgttttggttcct  16326800                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                               <---------ANAC55(2)                            <------                                            --------->MYB46(3)                                -------                        --------->ANAC58    <---------ATHB12                                  -------                        --------->ANAC58  --------->WOX13(1)                                  -------                        --------->ANAC46------------>CBF                                      <------      --------->HSFB2a(2)              --------->ANAC58                                       -------      <---------HSFB2a(2)              --------->AtLEC2                  ----------->RAV1(1)  <------ ->ZmHOX2a(1) --------->ANAC58         --------->ANAC58                 <----------ID1        ------- --->TOE2(3)  --------->ANAC46         --------->ANAC46            ---------->DOF2    --------->YAB1 >ARR14(2)    --------->ANAC58      <-------TEIL--------->TOE2(3)  ==================================   caaactatctagaaacacacaacttcacgaattacaaatacatgcaatcacctaaattcaaaacacaccgaaagacaacaaaattcaaacataaacacgt  16326900                                       >>>>>>>>>GATA-1                               ----------->HVH21 ------>HVH21                 <-----------HVH21 ->MYC3                       <-----------TGA1 --MYC2                      --------->O2 ->MYC2                      --------->ANAC58 --MYC3                      <---------O2 ---O2                       --------->bZIP60(2) -->TGA1a                    --------->TGA1a -->O2   --------->ANAC58    <---------TGA1a -->ANAC55(2)                --------->ANAC55(1) ---ANAC55(2)                --------->ANAC46 -->ANAC46                   <---------ANAC55(2)                                         ---------->DOF2 ---TGA1a--------->ANAC58    --------->ANAC55(2)                    --------->ANAC46  --------->ANAC58 ---->GT1--------->ANAC46    --------->ANAC58                   ----------->RAV1(1)   --------->ANAC58 ===bZIP_DOF                <-----------STF1                   --------->ANAC46       --------->AtLEC2   gaaactgaaacacgatacaaaaaaaaaaaacacgtcacatagataaactcaaaacaccctcgaacacaacacaacattttggtttagcatgcaaagggga  16327000                                                                                 --------->ANAC46                                       -------->P                     <---------ALFIN1                                       ------->TEIL                 <---------ALFIN1                <----------DOF2    ------>MYB46(1)                 <---------ZAT18      --------->ANAC58             ==================HOX2a_HOX2a                         --------->ZAT18<-----------HVH21             ------>ZmHOX2a(2)     ------>MYB83              <---------ATHB12  ------>NtERF2       --------->ANAC55(2)        --------->WOX13(1)        ------>MYB83       <---------ATERF1(1)       --------->O2             ------------>CBF            -------->P--------->ANAC46  --------->ANAC58       <---------ANAC55(2)   --------->ZAT18                ------>MYB46(1)   --------->DEAR3(1)      <---------TOE1(2)   ---------->DOF2              --------->ANAC58     <---------ATERF1(1)     ------>ZmHOX2a(1)  ------>ZmHOX2a(1)              --------->ANAC58    --------->ANAC46     ===============HOX2a_HOX2a------->TEIL            --------->ANAC46   ------>ZmHOX2a(1)   aagactcctacgtgatccctttagtcctaaatgcaccaatctacctccatatgaaataagccaaccatgtccactcctcgcctccgtcgcatgccaagac  16327100                                                                                                   --                                                                                                  ---                                                                                                  XXX                                     <------NtERF2                                                ---                                    <-----------HVH21                  <---------ARR14(2)         ---                                    <-----------TGA1                   --------->ARR14(2)         <--                                   <---------bZIP60(1)              <---------ANAC46            <----                                   <---------ANAC58                <------MYB83            <---------ATERF1(1)                                   <---------ANAC58                <------MYB46(1)        --------->ANAC58                        --------->LBD16                           --------->ALFIN1        --------->ANAC58                        <---------At4g35610               ------>ZmHOX2a(1)             <---------ANAC58                        --------->At4g35610           <---------ARR14(2)                <---------ANAC58            --------->MYB52(1)     --------->bZIP60(1)--------->ARR14(2)    <---------ANAC58   <-----     ---------->DOF2--------->ARR14(2)          --------->ZAT14  <--------P <---------ANAC58  ------>NtERF2    <---------ATHB12<---------ARR14(2)          <---------ZAT14  --------->ALFIN1 <---------MYB46(3)   tcgtcaataaagcataccggtctatccgctggaattggcgtcacttgcactatagggttcctctcgggttggggattttcttgatggtttgctcgcctcc  16327200        ------>ZmHOX2a(1) ---->NtERF2                          <---------At4g35610                             <-----------GT1 ------>ANAC46                   <---------ANAC58                  <-----------------AG XXXXXXXXXXXXXXXXX>MIR847        <---------ANAC46             --------->GLK1(2)--------->ICU4 ------>ANAC58                   <---------ANAC58             <---------ARR11(3)  <---------AHL20(2) ------>ANAC58             <---------TOE1(2)                  --------->ARR11(3)  <---------YAB1 -------ALFIN1             <---------TOE2(3)             --------->YAB1     <------ZmHOX2a(1) -----ALFIN1               <---------TOE2(2)     --------->YAB1    <-----------------AGL1 ----REM1(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------YAB1    <---------TOE2(3)         -   acgcctcttcctcttgaattgcaatgtccaaggtttcttgaggtgattcactcatattatcaaaaatctttcggtttaggaaatattattaccacataat  16327300                                                               <------MYB83                       ---                                   <---------AHL20(2)          <------MYB46(1)                    ---                               --------->ICU4                  ----------->GT1       ---------->DOF2                            ---------->ID1                    --------->MYB59      <---------YAB1 ---                        <---------ANAC58                     <--------P   <---------TOE2(3)  -------- -------->AtLEC2        <---------ANAC58--------->ZAT14<-----------GT1 <---------AHL20(2)  <------ZmHOX2a(1)   ccatggaaacatttcgcttcaatattgtttgtcatatttaagttcagtatgttgttttaacaagttggtaaatttttatgttattttgaaagaggaattc  16327400                                                        --------->CCA1(2)       <---------ANAC58                                                       <---------ARR11(3)       <---------ANAC58                                                 --------->WOX13(1)            <---------TOE2(3) ------>ANAC46                                 <---------YAB1     <----------DOF2 ------>ANAC58                                 <---------ATHB12  <---------ANAC58 ------>ANAC58                            ----------->GT1        <---------ANAC58                 --- ->GLK1(1)            <----------DOF2---------->DOF2   --------->ARR11(3)     <-----------GT1  <-----   aagccactacgagggaaaactgtgctttgcatacaaaaacaaagaggtaatcaatgagatatgttttgctttgtcaaattttacgttctgttcatgtgaa  16327500           --------->ICU4      <------MYB83                             <----------DOF2      <------MYB46(1)            --------->CCA1(2)   <----------DOF2                               --   >>>>>>>>>SARD1           ---------->DOF2   <---------ANAC58                                  -----   >>>>>>>>>CBP60g      --------->LBD16   <----------DOF2                   <-------TEIL       <----- -------->GT1          <---------LBD16 <---------ARR11(3)               <---------AHL20(2)     <----- ----AtLEC2<---------YAB1 <------ZmHOX2a(1)   <---------ANAC58         --------->AHL20(2)     <------   tggaaatttggtgatgattcaaaatccaggaaaagaaacgagaactttgcttttgctttaaacaaaatacttataaaattcatacttcgcagaaattaac  16327600  Previous    Next  AGI:  At3g44770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29550.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 16327067    to: 16330445    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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