Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ---------->DOF2   ----------->RAV1(1) -------->ANAC58                    <----------ID1 -------->ANAC58          <----------ID1                      <-----------------AGL1 -------->ANAC46        <---------------AtSPL8                <-----------------AG               ---- --------ZAT18         ------------------------>ANAC81      <----------DOF2                      ---- -------ALFIN1         --------->DAG2                    --------->ARR11(3)           --------->GLK1(2) ----->At4g35610      ---------->DOF2                    <---------AHL20(1)          --------->ARR11(3) ------At4g35610  --------------->AGL15                  <---------ARR11(3)          <---------ARR11(3) --->ANAC46      ===============================================================MADS_MADS<-----------RAV1(1) --->DOF2        ----------------->AGL3             <------ZmHOX2a(2)              <---------TOE2(3)   gcacaccacaaaagtagacaccaaaaaagggacaaaaaaaaacaaaacttcacgatcaatatctttctgtattggtaagaagtttgagattttgttgcca  16322600                                                                  ---------->ID1                                                            --------->AHL20(1)                                                            <---------AHL20(2)                                                           --------->ATHB51                                                           <---------AHL20(2)                                                           --------->YAB1                                                           <---------ICU4                                                           <--------HAHB4                   ---------                                                           --------->AHL20(2)              <---------YAB1                                                           -------->ATHB1            <----------DOF2                                           <----------DOF2--------->ICU4             <---------DAG2                                         ---------->ID1   <---------ATHB51        <---------AHL20(2) ----->ANAC58                        <----------DOF2      <---------ATHB12        <-----------GT1 ----->ANAC58--------->ZAT14     <---------CCA1(2)      --------->WOX13(1) ------->TEIL   <----------   agtcaatatttcaagtgaagtatcgttctcttctcatttctttgtcttttacaactatcaattattttgtcacattgaatctaattactttttatgatgc  16322700                                                                                                   <-                                                                                      --------->ANAC55(2)                                                                                     <---------------AtSPL8                                                                                     --------------->AtSPL3                                                                                 --------->CCA1(2) <-                                                                              ----------->ARR10    <-                                                                         <---------AHL20(2)----------                                      <---------ANAC46               --------->AHL20(2)<---------SPL7                                      <---------ANAC58              <---------ARR11(3)<---------ANAC46                        --------->ANAC46                            --------->ARR11(3)<---------ANAC58              --------->ANAC58        <---------ANAC58              --------->AHL20(1)<---------ANAC55(2)              --------->ANAC46      <---------ZAT14              --------->AHL20(2) <---------TGA2(2) ---------->DOF2        --------->ANAC58        ---------->DOF2 --------->AHL20(2) ----------->HVH21 >YAB1        --------->ANAC58      --------->ZAT14  ---------->DOF2<---------AHL20(1)<---------ANAC58 -----------WRI1        --------->ANAC58------>ZmHOX2a(1)       --------->YAB1--------->MYB59   -----   tctcaaagtgaaattcaagccagtacaagcgaaaacagtgtcctgcatacaaaagtaaagagctaataaaaatatttagttagatatgacgtactgtgat  16322800                     --------->ICU4                     <---------YAB1                   --------->YAB1                                                           <--------             --------->ANAC58                                                             ------>MYB46(1)          --------->ARR14(2)                                                              ------>MYB83 --------ANAC58    <---------ICU4         --------->ZAT6                                <---------MYB111(2) --------ANAC46   --------->ICU4   --------->ANAC58           <---------TOE2(3)         <---------MYB46(2) --------ANAC58   <---------ATHB12 --------->ANAC46      <----------DOF2                <---------MYB111(1) ->GT1    <---------ARR14(2)       --------->ANAC58   <-----------GT1            <-----------GT1 ---->GLK1(1)--------->ANAC58 <---------ARR11(3)     <-----------GT1     --------->HSFB2a(2)<--------   ttcttgtgaagggatactcaatgatgattcaatatccaagaaaaacactagagttttaacttttaagttaagtttctcgattttttctcacctacttttg  16322900                                                                                <---------ETT(2)                                           --------->MYB46(3)                   --------->ETT(2)                                         --------->MYB52(1)                     <---------ZAT18                                      --------->ZAT2                       --------->ZAT2                                     ------>MYB46(1)                       --------->At4g35610                                     ------>MYB83                          <---------ZAT2                                     --------->ANAC58                      ----------->RAV1(2)                                     --------->ANAC58                      <---------At4g35610                                   ------->GAMYB                         <-----------RAV1(2)   <-------TEIL                   --------->MYB46(3)                 --------->ARR11(3)     <-------- -DAG2          <---------YAB1   --------->ANAC58                    <-----------ARR10      <-------- --DOF2      <---------YAB1      --------->ANAC58             *TSS   <---------ARR11(3)  <-----------GT1   ctacatacacattttcttattaatacatacttcacaaccaagctaacaactgtttttgtcaacatgttcaatatctcagctgtggacattgtttccttgc  16323000                                                         --------->YAB1                                                   <-----------GT1                            ---------->DOF2      <---------AHL20(2)                             -----                       <---------ANAC58    ----------->GT1        <---------DAG2              -------       ---------->DOF2 <---------ANAC46  <-----------RAV1(2)      <----------DOF2            -------- -ANAC58               <---------ANAC58 <------ZmHOX2a(2)--------->TOE2(3)          --------->ICU4--- -ANAC58        <-----------GT1       <------ZmHOX2a(1)<---------ARR11(3)      ----------->GT1<------   caacatgttcaaagtgattcacttgccttggaaagaagaaggatcaggtatataaactatcttaatcccttttcagaggttttgtaatttttctatgatc  16323100                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                <---------TOE2(3)                                                           ------>MYB46(1)                                                         <---------MYB59                                                         <---------------AGL15                                                         --------------->AGL15     <---------AHL20(1)                                 ----------------->AGL3     --------->AHL20(1)                                 <-----------------AGL3    <---------AHL20(2)                                  ----------------->AGL2                   <--- ->ZmHOX2a(2)            <---------YAB1                 ----------------->AG          ---------->DOF2 -->ARR11(3)             <---------TOE1(3)              ----------------->AGL1     --------->LBD16 <- ->YAB1                  <---------TOE2(3)      --------->GLK1(2) ---------->DOF2  <---------HSFB2a(2) -------->GT1       --------->YAB1             <---------GLK1(2)<---------YAB1     ------>ZmHOX2a(1) ---ARR11(3)       <---------TOE2(3)     --------->CCA1(2) ------>MYB83            --------->HSFB2a(2)   ttgtatatatattatactactaacattatggtttattaccaagatagacgattcttgaaccaaattaagaaagccatccagtctcctcgaaagaagaagg  16323200                                                   --------->ALFIN1                                                 --------->TGA1a                                                 <---------O2                                                 <---------bZIP60(2)                                                 <---------TGA1a                                                 --------->O2                                                 <---------ANAC58                                                 <---------ANAC58                                                 <---------ANAC46                                                 <---------ANAC55(2)                                                 <---------ANAC55(1)                                                 --------->ANAC55(2)                                              ----------->TGA1           <---------ANAC58                                              ----------->HVH21          <---------ANAC58                                           --------->ARR11(3)            <---------AtLEC2             --------->ZAT14               <---------ARR11(3)        <---------ANAC58 <---------At4g35610                      --------->CCA1(1)          <---------ANAC58 --------->At4g35610                      --------->RVE1(1)     --------->ANAC55(2) --------->ZAT2                     --------->HSFC1(1)          <---------ANAC55(2) <---------ZAT2                     <---------HSFC1(1)          ----------->GT1             --------- --------HVH21                      --------->HSFB2a(2)     --------->ATHB12             <---------CCA1(2) --------WRKY12 --------->ANAC46    <---------HSFB2a(2)   <---------WOX13(1)           --------->YAB1   gtcagctagataaactacacacactgatacaatgttttctcgaaatatctgacgtgtttgagtgattcgtaacttgcatgaactactaagcatatcatat  16323300                    <---------TOE1(3)          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->ARR14(3)                                    <------MYB46(1)      <---------AHL20(2)        --------->AGP1                                        <---------MYB46(3)   --------->YAB1        <---------ARR14(2)                                    <------MYB83         --------->AHL20(2)        <---------ARR11(3)        --------->ANAC58        <-----------RAV1(1)     <---------YAB1        <---------ARR14(3)        --------->ANAC58        <---------MYB46(3)    --------->YAB1        --------->ARR14(2)       <---------TOE2(3) --------->GLK1(2)           <---------YAB1    --------->ANAC46<---------TOE2(3)           ----------->ARR10              <---------AHL20(2) >YAB1  --------->ARR11(3)      --------->MYB52(1)<---------GLK1(2)            --------->AHL20(2)   tgctctacgagatcttaattctaaggtatagtactaacgaaatcagggattagattcttgttgttggtgagtcttgtgcatataattatatcaacatgtt  16323400                                         <---------ALFIN1                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                     --------->GLK1(1)                       <----------DOF2                                     =====================================HOX2a_HOX2a                                    <---------ARR14(2)             --------->AtLEC2                                    --------->ARR14(2)             ------>ZmHOX2a(1)                           --------->ANAC58                      <---------ANAC58                     =======================HOX2a_HOX2a          <---------ANAC58                     ========================HOX2a_HOX2a      <---------GLK1(1)                     <------ZmHOX2a(1)====================================HOX2a_HOX2a            <---------ETT(2)       <---------PCF2             --------->GLK1(1)            --------->ZAT18--------->ANAC58                  --------->ARR11(3)            <---------REM1(1)            --------->ETT(2)    --------->ALFIN1             <---------ARR11(3)     <---------YAB1   caatatttcatatgtggacagtaggagccaagcagtgggatccccacttggattagttagtaagatttcctgcaaatttctttattagcattgttgtagt  16323500  Previous    Next  AGI:  At3g44765.1    Description:  other RNA Range:  from: 16322962    to: 16325014    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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