Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->YAB1                                                                                    --------->ATHB51                                                                                    <--------HAHB4                     <---------------AGL15                                          -------->HAHB4               <---------ICU4                                                       -------->ATHB1              --------->ICU4                                                        <---------ICU4             <---------ANAC55(2)                                                   <---------YAB1             --------->ANAC55(2)                                                   <---------ATHB51          <---------ARR11(3)  <------ZmHOX2a(1)                                    --------->ICU4      <---------YAB1 --------------->AGL15                             <----------DOF2    --------->YAB1  <-----------------AGL3                             <---------------AGL15    <----    <---------ICU4  <-----------------AGL2                             --------------->AGL15    <----   <---------ATHB51 ----------------->AGL3                          <---------ARR11(3)   ---------->DOF2   --------->ICU4<---------YAB1        --------->AHL20(2)           <---------ARR11(1)  <---------AHL20(2)   <---------ATHB12 ===================================================================MADS_MADS----- ---------AHL20(2)<-----------GT1     --------->YAB1                --------->ARR11(3)<---------YAB1 ->ZAT6   --------->ARR11(3)--------->MYB59  --------->ANAC46      <---------CCA1(2)<---------AHL20(2)   attcaattatgagatacttattactacaattaggaagaaataaaaatacaccattgagttgagtttctcatatcttttttttgtaattattaaaagtgag  16302700                                                                                              <------                                                                                  --------->ATHB12                                                                  --------->AHL20(2)<---------WOX13(1)     <----------DOF2                                        <---------TOE2(3)    <---------YAB1 ---GAMYB                                             <---------YAB1  <----------DOF2         ------- -----At4g35610                --------->DAG2        --------->ARR11(3)        --------->TOE2(3) ---->At4g35610               ---------->DOF2        <---------ARR11(3)       ----------->GT1------->TEIL   ttgaattctttcaagttcaaatttcaatttagaaaagtagaacattactctgaaatatcattaagaaattaactttgaaaatgttaattggtatgcatct  16302800                        --------->ANAC58                        --------->ANAC58                                                         ----                  <---------AHL20(2)                                                             <---            <------ZmHOX2a(1)      <---------AHL20(2)                                           -----          <---------TOE2(3)    ----------->GT1                                               <------- ---At4g35610     --------->AHL20(1)           <----------ID1        --------->TOE2(3)    <---------ATHB12 -->At4g35610     --------->AHL20(2)           ----------->GT1 ------->TEIL       ------>ZmHOX2a(1)   gatagcatattttaggaaaataaaataagcaaattgtttatttatcttagggaaaaatttagatgaacttacattaactgagtcctcttccactgatgta  16302900                                    <---------ICU4                                   <---------YAB1  --------->CCA1(2)                       <---------AHL20(2)                                   ------>ZmHOX2a(1)                                       --------->AHL20(2)      --------->MYB52(1)     <----------DOF2      --------->ARR11(3)                     --------->YAB1 ----->At4g35610         =================HOX2a_HOX2a   <---------ZAT6     <---------TOE2(3)<-------- ------At4g35610         ------>ZmHOX2a(2)        <---------ARR11(3)   --------->ARR11(3)--------->TOE2(3) -->TEIL               <---------ARR11(3)     ---------->DOF2        <---------YAB1--------->YAB1 --REM1(1)             --------->ARR11(3)<---------ANAC55(2)       <---------At4g35610--------->YAB1   gctgaaactaatggatttatctcttgatcttcttttcctgattacatataaagatttagagttgaaggaagatgattttggttattgataatattaattt  16303000         --------->YAB1         <---------ICU4                                                                          <---         --------->ATHB12                                                                   <--------         <--------HAHB4                                                            --------->AtLEC2        <---------ATHB12                                                           --------->ANAC58        --------->ICU4                                       --------->AHL20(2)    --------->ANAC58        <---------YAB1                             ------->TEIL                   --------->ANAC46    <------------------ATHB9                  <---------At4g35610    <------ZmHOX2a(1)   --------->ANAC58 -AHL20(2) <---------YAB1----------->RAV1(1)  --------->At4g35610  <---------TOE2(3)     --------->ANAC58   taagaaactaatcattactgtattcaacaacatacctcttcgaattgcagatgaacttgttgataaaatgaggaagagaactgccaggcacaagctttgc  16303100                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                        --------->ARR14(2)         <---------ANAC58                               <---------GLK1(2)           ------>ZmHOX2a(2)         <-------GAMYB          --------->DAG2          --------->ARR11(3)        <---------ARR14(2)         <---------ANAC58----------->GT1                <---------ARR14(2)        --------->ARR14(2)< -------DOF2           ----------->GT1 *TSS      <---------WOX13(1)       --------->ANAC46--------->GLK1(2) --DOF2 <---------MYB46(3)     ---------->DOF2<---------YAB1      ----------->TBP <---------AGP1    -   ttcatgttcttggttgagagagagagagagaaaaaaagtgagaagtttgtgatagacagatactgaatataaatacacagagtcgatctgagattccatt  16303200                --------->AHL20(2)      <---------YAB1    --------->ATHB51    --------->YAB1    <---------AHL20(2)    -------->ATHB1              <<<<<<<<<<WRKY38    <---------ICU4              <<<<<<<<<<WRKY26    <--------HAHB4              --------->WRKY18(1)    -------->HAHB4              <<<<<<<<<<WRKY43   <---------YAB1             <------MYB83   <---------ATHB51           <------MYB46(1)   --------->ICU4            --------->MYB59                                          <---------At4g35610 ---------AHL20(2)           <XXXXXXXXXXXXXXXXXXXMIR773B*                             <---------ZAT2 -------->AHL20(2)    --------->TOE2(3)         <----------DOF2           <-----------GT1   ttttaattattatctaaaaaaaattcttagtttggtcaagtttttgttttctttgttcacatcaatatgtcaaatttaacttgaatccagctaatagata  16303300                                                                -------->ATHB1                                                                <--------HAHB4      <---------ANAC46                                                                --------->ATHB12    <---------ANAC55(1)                                                                <---------ICU4 <---------ICU4                                                                --------->YAB1 --------->YAB1                                                               <---------ATHB12--------->ATHB12                           <-------TEIL                       ------->TEIL     -------->HAHB4                        ----------->GT1             <---------ICU4            --------->ICU4                       <---------------AtSPL8       --------->YAB1            <---------YAB1                       <---------------AtSPL3      <---------ATHB12           <---------ATHB12          --------->At4g35610--------->TOE2(3)     <---------ATHB51         --------->YAB1  ---------      --------->TOE2(3)--------------->AtSPL8      --------->ICU4     --------->TOE2(3)     <--------   atagactacattagctcaaactaatatggtacattaacaaatatcaaatgcaaataatgacatgaatcattacctcagtaatgattaagtgtatataaat  16303400                                                                   <----------DOF2                             <---------YAB1                     <---------ARR11(3)                           --------->YAB1                       --------->ARR11(3)                          <---------YAB1                       --------->GLK1(1)                       --------->AHL20(2)                      <---------GLK1(1)                       <---------YAB1                      --------->ANAC58      --------->ATHB12 <---------AHL20(2)             <----------ARF1           --------->LBD16 >AHL20(2)          <---------DAG2       --------->AHL20(2)--------->ANAC58    <---------LBD16 -AHL20(2)          <----------DOF2   --------->YAB1  <----------ID1          <---------LBD16   cacatagttgattagtagaatactttttattatgagtttatcaaaaaatatgaagggagacaaggaaatcttttagtaattcgggggagagcaaagtttc  16303500                 <---------AtMYB61                 --------->ALFIN1               --------->ALFIN1           ---------->DOF2    <---------ICU4         ---------->DOF2    --------->ATHB51      ------->GAMYB    --------->ATHB12     --------->MYB46(3)                  <---------ANAC58                       <    <--------ATHB1       <---------MYB55(2)                  <---------ANAC46              <---------WRKY12    -------->HAHB4      ------>MYB46(1)                      <---------ANAC58        --------->TOE2(3)   --------->AHL20(2)   ------>MYB83                     <---------ANAC58            --------->TOE2(2)   <---------AHL20(2)   -------->P                       <---------ANAC58      <-----------GT1      >   <---------ATHB51 --------->PCF5                  ---------->DOF2  <-----------HVH21     <---------WRKY38(1)   gctaaataattgagaaagtgtggtccaaccaaagtcttagacatatactaatgctaaagtcttgcctgttttgtcagagtttttcaacctaagtcaactc  16303600  Previous    Next  AGI:  At3g44735.1    Description:  PSK1 (PHYTOSULFOKINE 3 PRECURSOR); growth factor. Identical to Putative phytosulfokines 6 precursor (PSK6) [Arabidopsis Thaliana] (GB:Q8LA14;GB:Q7PCC2;GB:Q8W5Q9); similar to hypothetical protein [Vitis vinifera] (GB:CAN62427.1); contains InterPro domain Phytosulphokine; (InterPro:IPR009438) Range:  from: 16302181    to: 16303139    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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