Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->TOE1(2)                                               ----------->RAV1(1)                     <---------ICU4                                          ------>ZmHOX2a(1)                         --------->YAB1                                         <---------ANAC58                           <---------ICU4 -------ZAT18                            <---------ANAC58                        --------->YAB1 -------ZAT14                     <-----------GT1   --------->TOE2(3)       --------->ARR14(2) ------>ZAT14         <---------ATHB12   --------->TOE2(3)                  <---------ARR14(2)     <- ---ICU4  --------->GLK1(1)      <-----------GT1 <---------ALFIN1      ----------->GT1<---------YAB1   tacactcacgagaaatcgattccaatcgtttagttttatcgttccttagcaacacattaatcttcccatgagatggagaatactcatcatcatgcgatgt  16244800                                                                                           <---------HSFB2a(1)                                                                                           <---------HSFC1(2)                                                                                           --------->HSFB2a(1)                                                                                          --------->ARR14(2)                                                                                       --------->LBD16                                                                              <---------TOE1(3)                                                                              <---------TOE2(3)  ----                                                                             <---------DOF5.7(2) ----                                                                         --------->LBD16  <---------ARR14(2)                                                                        <---------HSFB2a(2)--------->HSFC1(2)                                                                   --------->HSFB2a(1) <---------RAP2.6(3)                                                                   --------->HSFC1(2) --------->LBD16                      ---------->ID1                       ------->TEIL <---------ANAC46 <---------GLK1(2)                    --------->MYB52(2)       --------->TOE1(2)    <---------YAB1     <---------LBD16                   <-------TEIL           <---------ARR11(3)XXXXXXXXXXXXXXXXXXXX>MIR172A/B--------->GLK1(2)  ------->TEIL <---------TOE1(2)          --------->ARR11(3)XXXXXXXXXXXXXXXXXXXX>MIR172E<------NtERF2 --------YAB1  <---------TOE2(3)     <---------MYB46(3) <---------YAB1 <---------LBD16--------->ETT(1)   gatgaatctagagggcttaggttcgtcgctcaatctcgatggatgatcatgcgatgtgatgaatctcgatgattccggataacgtttgccggaatcttcc  16244900                        <-------TEIL              <---------ANAC46                           ------>ZmHOX2a(1)        <---------TOE2(3)                                --------->ICU4                        <-----    --------->YAB1    --------->TOE2(3)             <---------DEAR3(2)                        -------   <---------YAB1   <---------TOE2(3)              <---------DEAR3(1)               ------->TEIL ----->LBD16  <---------ANAC58                   <-----------HVH21             <----------DOF2------- -->ZmHOX2a(1)<---------ANAC58            <<<<<<<<<TBF1  <---------YAB1     <----------DOF2--------->REM1(1)   tgaagatgataatgtttcgtataacgttcatcgtctctctcttcttcttctcgtcggtccttattagaaaattcagtgcttctttgaatctctacatcgt  16245000                      --------->LBD16                     <---------ANAC46                 <---------ARR14(2)                 <---------GLK1(2)       <-----------ARR10       --------->GLK1(2)       --------->ARR11(3)       <---------ARR11(3)       <---------ARR14(2)     <---------ANAC58                                     <---------ANAC46       --------->ARR14(2)     <---------ANAC46                                 --------->RAP2.6(3)      <---------GLK1(2)     <---------ARR11(3)                                 --------->SPL7  <------ZmHOX2a(2)  <---------ANAC55(2)                                      --------->MYB52(1) ----SPL7        --------->ARR14(2)     <---------MYB52(1)                    <---------ARR14(2) ---- -->TOE1(1)    --------->LBD16<---------ANAC58                                --------->ARR14(2)----- -->TOE2(1)  <---------LBD16--------->ARR11(3)                         <---------AHL20(2)    --------   acagatcagaatcttgccggattccgtcaatatcgtgtttctgttcgtcgactctgtgagaaaccatatcgattttatcggaacggcttgaaacatcgcc  16245100                                     <-----------HVH21                                    --------->TGA1a                                    <---------TGA1a                                    --------->O2        <---------YAB1        --------->At5g28300  --------->bZIP60(1)         --------->GLK1(2)      --------->YAB1          <-----------HVH21    <---------bZIP60(1)         <---------ARR14(2)      <---------ICU4     ----------->HVH21      ----------->TGA1               --------->ARR14(2)     <---------ATHB12   <-----------TGA1        ----------->HVH21       --------->GLK1(2)       ----- -->NtERF2              <-----------HVH21<------NtERF2                 <---------GLK1(2)       <----- ---->DEAR3(1)         --------->ANAC46<---------DEAR3(1)           <------NtERF2              <----- ->DEAR3(1)          <-----------------AGL1  --------->DAG2    <---------TOE2(3)   --------->At4g35610   gagtttaatcatgctcgactcgttcccgtcacggtcactcgtcggagaaggtgacgacaatcgttgaggcagagaatcgcgaatccgctctctcattaac  16245200                                                                   ------->GAMYB                                                                  <------------AtMYB77                                                          ---------->DOF2        >>>>>>>>>TBF1                                                ------->TEIL      --------->DEAR3(2)                     --------->DAG2         --------->TOE1(3)     --------->MYB46(3)       <------------CBF  ----------->HVH21 ----------->RAV1(2)  --------->MYB52(1)  --------->ARR11(3) ---->YAB1          ---------->DOF2       --------->GLK1(2)--------->DAG2     >>>>>>>>>TBF1 ----YAB1 ------------>CBF       ------>ZmHOX2a(2) --------->TOE2(3)      <------ZmHOX2a(1)      ---- ----TOE2(3)   --------->YAB1   <------ZmHOX2a(2)  --------->TOE1(3)<-----------HVH21     <----------ID1   ataaccagagattgcaatcggaaaaagttgacagatcgctagagaacctgaacccttaaaaaaagctaaccgtcgaggaagaagaagaactagggacaaa  16245300                               ---------->DOF2                 ------>ZmHOX2a(1)                   <---------ANAC58       <------MYB83  ----------->RAV1(2)             <---------ANAC58                  <---------AHL20(2)       <------MYB46(1)    <---------PCF2 <-----------GT1     ----------->GT1  ------>ZmHOX2a(1)   <-- ----->AHL20(2)----------->RAV1(2)   <---------RAP2.6(3)   <---------AtLEC2---------->ID1       <----   aatataggctggtctggtcctgggcctgggcccaagagccgttttacaacattaggcttgtgcatgtaaaatagttcgtcctcttgaatttttttgttta  16245400                                                                                                 ----                                                                                            <--------                                                                                           <---------                   <---------AHL20(2)          --------->MYB46(3)                      --------->YAB1                --------->ARR11(3)           <-----------GT1                          <---------YAB1          <XXXXXXXXXXXXXXXXXXXXMIR1886.2   <---------AHL20(2)                         --------->ICU4  --------->AHL20(2)                    <---------ARR11(3)     <---------AHL20(2)    --------->AHL20(2)  <---------AHL20(2)<-----------GT1     --------->ARR11(3)     --------->AHL20(2)    <---------AHL20(2) -------ZAT6    <---------ARR11(3)<---------YAB1   --------->AtMYB61 <----------DOF2 <---------AHL20(1) -----ANAC46---------->DOF2    --------->TOE1(2)------->GAMYB  --------->YAB1       --------->YAB1   gtgtttaatttgaataaagattttatcttataaactacgatagattttaacgaccatctcactaattaaaacttttagccatcacattataattaacatt  16245500                                      <----------ID1                                   ---------->DOF2                              --------->YAB1                             <-------TEIL                          <---------RVE1(1)                         --------->ARR11(3)                                                 ---------                         --------->ARR14(2)                                              --------->ANAC58  --------->AHL20(2)     <---------ARR11(3)                         ----------->GT1      --------->ANAC46 ----->AHL20(2)        <---------TOE2(3)             <---------ARR11(3)                  --------->ANAC58 -TOE2(3)       <---------------AGL15 ----------->GT1<---------AHL20(1)                 --------->DAG2 --GT1 <-----------GT1 ----------->ARR10----------->GT1   ----------->HVH21            ---------->DOF2   ttaaaaatataacattttctatactaagatattcataaaaaggagaaaaacacaatatatgtgacaagaagagaaaataaacttttgaaaaaagcaacat  16245600                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               <---------ZAT14                                                               --------->ZAT14                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <---------LBD16                                                          --------->LBD16                                                         xxxxxxxxxxxxxxxx>smallRNA(s)                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                         --------->ANAC46                                                        ------->GAMYB                                                        <---------LBD16                                                     <-----------GT1            <---------AHL20(2)                                                  xxxxxxxxxxxxxxxx>smallRNA(s) --------->AHL20(1)                                                  <xxxxxxxxxxxxxxxxsmallRNA(s) <---------AHL20(2)                              --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <---------YAB1       xxxxxxxxxxxxxxxx>smallRNA(i) <---------AHL20(1)                            --------->AHL20(2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            <---------AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     --------->MYB59             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------TOE2(3)          <---------ARR11(3)             --------->AHL20(2)             --------->YAB1 <---------AHL20(2)  <---------GLK1(2) --------->ANAC46        <---------AHL20(2)  --------->AHL20(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->AHL20(2) --------->YAB1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------TOE2(3)     --------->AHL20(2)   <---------YAB1       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------TOE1(3)    --------->AHL20(2)--------->ANAC55(2)      <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->AHL20(2)  - -->RAV1(1) --------->AHL20(2)--------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       ---------->DOF2   atgaaaataaaaaaataaaaatttaggtattataatatactactaaactagattttaacccgcggtataccgcagggacaatttattttttaaagttagt  16245700  Previous    Next  AGI:  At3g44690.1    Description:  unknown protein Range:  from: 16241672    to: 16245202    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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