Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->TOE2(3)        --------->TOE1(3)      <---------TOE1(3)      ----------->GT1  --------->YAB1  --------->ANAC58       <---------GLK1(2)       <----------DOF2  --------->TOE2(3)        --------->GLK1(2)      --------->TOE2(3) --------CCA1(2)  --------->ANAC58    --------->YAB1          ---------->ID1              <---------LBD16   tctatcttaagcttaaactcaggccaaagaatcgaaaaaatcagaaacttcacctaaaacccttgttcttttcatcaaaaaccctactcaattctggagt  16240500                                                         <----------DOF2                                                        <---------DAG2            <----------ID1                                                     <-----------GT1            <---------ICU4                                                  <---------GLK1(1)             --------->YAB1                              <---------HSFB2a(2)--------->ARR11(3)             ---------->DOF2   <--                              --------->HSFB2a(2)<---------ARR11(3)  --------->ATHB12            <---                       --------->ANAC55(2) <---------YAB1--------------------->WRI1             -----                   <----------DOF2      --------->ARR11(1)        ------->TEIL <---------ATHB12 <----           --------->YAB1  <---------YAB1--------->CCA1(2)      <-------TEIL   --------->ICU4   <----   atttccaaactaatcgtaaccctttacttattctagactatagatatgaaagatttcacctttcgatgcatcgattgagcaataaagacaaaaactagtg  16240600                                                                     ---------->DOF2      --------->ICU4       ----------->GT1                                        --------->TOE1(3)      --------->ANAC58 -------MYB46(3)                  --------->WOX13(1)          --------->TOE2(3)      --------->ANAC58 ------DEAR3(1)                --------->TOE2(3)           <-----------GT1         ---------->DOF2 ---->ZAT18                   --------->REM1(1)          <----------DOF2       --------->DAG2   <---- -----ZAT14                  <-------TEIL             --------->GLK1(2)       --------->DAG2   ------ -----ZAT18              ----------->GT1    --------->ARR11(3)--------->YAB1 ---------->DOF2 ------->TEIL   cggttcaagtggataaaacttgctcaagagttacatcaatctcaaggattttggagtttctttaccataaataaagaagaaaagggaaagaaatgaatat  16240700                                                                             --------->YAB1                                                                             --------->TOE2(3)                                                                             --------->TOE1(3)                                                                   --------->ANAC46                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                  --------->SPL7                                                                  <---------TOE1(2)                                                                --------->TOE1(2)                                                                --------->TOE2(2)                                                               ------>ZmHOX2a(2)                                                              --------------->AtSPL3                                                              --------------->AtSPL8                               --------->ANAC58               <------ZmHOX2a(2)                               --------->ANAC58               <---------------AtSPL8                         --------------------->WRI1           <---------------AtSPL3                 --------->GLK1(2)       ---------->DOF2     <---------ARR14(2)      ---------->DOF2    ------>ZmHOX2a(1)                   <---------ARR11(3)    <---------YAB1----------------------->TaNAC69(2)    --------->ANAC58  --------->WOX13(1)  --------->YAB1<---------ARR11(3)     --------------->AGL15 --------->ARR11(3)                     < <---------YAB1 --------->ARR11(3)     <---------------AGL15 --------->ARR14(2)                     < -------GT1     <---------GLK1(2)  <---------CCA1(2)    --------->ANAC58<---------ATHB12           <- --->KAN4(2)   <---------RVE1(1)  ------->TEIL   ---------->DOF2<---------SPL7  ---------->DOF2    --   accatcataaaagtaagagattttgtccttggaacgcatctcttaaagaagaaaagacacgaagatcgtacgaaatcaatcttaaagaaagattatacag  16240800                                                                                       <------NtERF2                                                                                      <---------ZAT2                                                                                      ------>NtERF2                                                                                      --------->ZAT2                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                    --------->RAP2.3(1)                                                                                    --------->ATERF1(1)                                                                                   <---------ATERF1(1)                                                                                   <---------RAP2.3(1)                ----------->ARR10                                                 <---------DEAR3(1)            --------->At4g35610                                                  <---------LBD16            <---------At4g35610                                                 ------>NtERF2        <---------ARR14(2)                                                      --------->LBD16        --------->ARR14(2)                                                     <---------DEAR3(1) ---------RVE1(1)                                                             <---------LBD16 ---------CCA1(1)                                 --------->YAB1         --------->ARR14(2) --------ARR11(3)             --------->CCA1(2) <---------WOX13(1)       <---------GLK1(2)        <-- ------->ARR11(3)   <-------TEIL              --------->ATHB12       <-----------GT1<------NtERF2 ---   agatatttcaggtctgcttagattcagtagagagatgagacgatttcttcattgatgaagtcgcagagatttcacgattctccggcggagccgagaagag  16240900                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 >>>>                                                                                                 <<<<                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                <---------At4g35610                                                                                --------->At4g35610--                                                                               <---------YAB1 -------                                                                           --------->ZAT14    -------             ---------->DOF2                                               <---------ZAT14  ---------     <---------MYB52(2)                                           <---------ANAC46     ----------->HVH21 --------->At4g35610                                 ----------->GT1      <---------ZAT6    <-------- -------At4g35610                                  ---------->DOF2<---------ANAC58   --------->bZIP60(1) ------>At4g35610                        *TSS ----------->GT1     <---------ANAC58   <---------bZIP60(1)   agcagcaacgaagcgaaaagaagaagagagaagagaagaacaaggggagagtcaaaagtgaaacgatgtcgttttagtgttctgatgacatgacagatga  16241000     ---------->DOF2    <---------AHL20(2) ---------TGA1 ----->O2 ------O2 ------bZIP60(1) ------TGA2(1) ----->TGA2(1) ----->bZIP60(1) >>>>>>HY5 <<<<<<HY5 ----->ANAC55(2)                                                       --------->ATHB12 ------ANAC55(2)                                                       <--------HAHB4 ------>STF1                                                   <---------ANAC58 -------STF1                                                   <---------ANAC58 ----TGA2(2)                                                  --------->At4g35610 ------->TGA2(2)                                     ----------->HVH21 <---------ICU4 ---->HVH21                 --------->ARR14(2)   <-----------GT1<----------DOF2 ---->TGA1                  <---------ARR14(2) --------->YAB1 <---------At4g35610 >At4g35610           --------->DAG2          <---------YAB1<--------P<---------ATHB12 -At4g35610          ---------->DOF2        --------->YAB1 <---------MYB52(1)   cgtcatttaaagtgtatttgataaaaagcggttttgactcatggttttataataccagaccggtagctttccatcatttgaaccgaatcgaaattgaatt  16241100                   <---------ATHB12                 --------->WOX13(1)               <---------ATHB12             --------->WOX13(1) --------->ARR11(3)           <---------AHL20(2)   <---------ARR11(3)           --------->AHL20(2)  <---------CCA1(2)      <XXXXXXXXXXXXXXXXXXXXMIR778                                --------->ARR11(3)     <---------ANAC46     ----------->GT1<----------DOF2  <---------ANAC46   tgatactgtgtatataaatcaatcgatttagttatatcttcttctttctcttgtctggtttagtatacatcttcaatttcaaaacatgtaaactgaatca  16241200                      --------->YAB1                     <---------ATHB12                     <<<<<<<<<ARR2                --------->YAB1                            --------->YAB1             --------->YAB1                            --------->YAB1             <---------ICU4                           <---------YAB1                                <            --------->ICU4                           --------->AHL20(2)                             <           <---------KAN4(2)                         <---------AHL20(2)         <---------AHL20(2)<--       --------->ANAC58               >>>>>>>>>MYB2 --------->YAB1          --------->AHL20(2)    <--       --------->ANAC58        ---------->DOF2 --------->HSFB2a(2)  <---------MYB46(3)     ----------   aattcgaccaaggaatgatcacaatcaaaatgagaaagaaaaccaatttcgagattataatagtaagaagttgttagattatataaacttgttgagttat  16241300                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                            --------->MYB46(3)                   ----                                                       --------->ANAC55(2)                       <---                                                       <---------ANAC55(2)                       <---                                                  --------->O2                                   ----         ------>ZmHOX2a(2)                        --------->TGA1a                                ----        <---------GLK1(1)                        ------>MYB83                                    ----       --------->ARR11(3)                        ------>MYB46(1)                               ------ ---------ANAC58                                --------->MYB52(1)               <------MYB83 ------- ---------ANAC58                         ---------->DOF2  --------->ARR14(2)     <------MYB46(1)----- ---------GT1                      <-----------------------TaNAC69(2)        --------->ATHB12-------- -------AHL20(2)      <-----------HVH21  ===================bZIP_DOF       <---------WOX13(1)<------- ->GT1 <---------ARR11(3)   --------->MYB52(1) --------->AtMYB61         --------->ATHB12  --------->ANAC46   ttacttgttgatctccgatgtcaatgtcactaccagagaccaaaaaagaccaacgtctcgtaaccactgtctacttgattgataggtcgatacaaaccac  16241400  Previous    Next  AGI:  At3g44680.1    Description:  HDA9 (histone deacetylase 9); histone deacetylase. Identical to Histone deacetylase 9 (HDA9) [Arabidopsis Thaliana] (GB:Q8H0W2;GB:Q9M1N6); similar to HD1 (HISTONE DEACETYLASE19), histone deacetylase [Arabidopsis thaliana] (TAIR:AT4G38130.1); similar to HD1 (HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16664.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77816.1); contains InterPro domain Histone deacetylase; (InterPro:IPR003084); contains InterPro domain Histone deacetylase superfami Range:  from: 16237543    to: 16240941    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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