Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             -------->P                         ------>ZmHOX2a(1)                     <-----------GT1                  --------->AHL20(2)          ----------->GT1                  <---------AHL20(2)        <---------ANAC58                  <---------AHL20(1)        <---------ANAC58            ---------->DOF2               --------->AHL20(2)           <---------ANAC46         --------->TOE1(3)    <---------AHL20(2)  <---------ANAC58 --------->GLK1(1)           --------->TOE2(3)    --------->AHL20(2)  <---------ANAC58 <---------GLK1(1)           --------->YAB1 ---------AHL20(2)--------->AHL20(1)    <---------ARR14(2)        <-----------GT1 --------ARR11(3) <---------ARR11(3)    --------->ARR14(2)    --------->AHL20(2) ------->ARR11(3) --------->ARR11(3)    <---------ARR11(3)   --------->AHL20(2) --------AHL20(1)--------->AHL20(2)     --------->ARR11(3)   <---------ATHB12      ---------->ID1   atatatttaaatttcaaaaatatattccttaccagtataacagatatcgtgttattagcatcaataaataaccataaatcagtttttcgcttatggagaa  16174400                                                                                                 ----                                                                                            ---------                               ----------->GT1                                            --------->MYB52(1)                              --------->DAG2                                              <---------ARR14(2)                         --------->HSFB2a(2)                                   <---------ARR14(2)<---                         --------------->AGL15                                 --------->ARR14(2)----                  ------>ZmHOX2a(2) <---------YAB1                         --------->At4g35610   <---         ------>ZmHOX2a(2)   ---------->DOF2       --------->ICU4 --------->ALFIN1        --------->ARR14(2)     <---------ZAT6      <---------HSFB2a(2)------>ZmHOX2a(2)     <-----------RAV1(1)    <---------SPL7   aactctagtgatcgattagatcggtttctaaaaaagttataagtgatcgagtaatgaacagtttagatgtgtggctaagcagaaccgtagccgaaccgaa  16174500                                    ------->TEIL                                    <-----------ARR10                                    --------->ARR14(2)             --------->YAB1         <---------ARR14(2)          <---------ANAC55(2)       <---------ARR11(1)         <-------TEIL         --------->MYB52(1)  --------->HSFB2a(2)       --------->AtMYB61  <---------HSFB2a(2)       <---------MYB59 ----->HSFB2a(1)      --------->ANAC46                                                         ------ >DEAR3(2)--------->ANAC55(2) ------>MYB83                                                    ------- ------HSFB2a(1)--------->YAB1------>MYB46(1)                      ----------->GT1           -------- ----->HSFC1(2) <---------AHL20(2) <---------CCA1(2)      <---------AHL20(2)                --------- ------HSFC1(2) --------->AHL20(2) <---------ARR14(1)   --------->YAB1>>>>>>>>>GT-1       <---------MYB52(2)   gtttctaaaaatacataataatatactaaaccaaaccgtatctaaaccaaagtttctaaaataatcgaatggttaataaaacccctattcaaactaacca  16174600                        <---------ARR14(2)                        --------->ARR14(2)                     --------->YAB1                   ------>MYB83                 <---------MYB59                                                           --------->ATHB12              ------>MYB83                    --------->YAB1                               <---------ICU4         <---------ARR14(2)            --------->ATHB12                                    --------->ATHB51         --------->ARR14(2)----------->GT1<---------AHL20(2)       --------->AHL20(1)     <---------YAB1     --------->DAG2--------->MYB52(1)  -------->HAHB4              <---------ARR11(3)     --------->ICU4 --------->YAB1 --------->MYB46(3)    <---------ATHB12             <---------AHL20(1)   --------->YAB1 --->TOE2(3)  ------>MYB46(1)  --------->WOX13(1)                  --------->ARR11(3)  <-------TEIL -->MYB46(3)<---------MYB59<---------ZAT6<---------YAB1       --------->TOE2(3)<---------MYB59    --- >P---------->DOF2 ------>MYB46(1)    --------->ICU4          --------->TOE1(3)--------->TOE1(3) ---- >MYB52(1) --------->DEAR3(2)<---------MYB52(1)       ----------->GT1          --------->TOE2(3)<----   aaatcaaaagggaaccgaaccaaacagaactgttaatcaaatgattaatcggaatatcgaaaaacctaaaatattcaaaaacctaaatgttcataattga  16174700                                                   <---------ARR14(2)                                               <---------LBD16                                              --------->MYB52(1)                                           <---------MYB59                                           <---------MYB52(2)                                   <---------ARR14(2)                                 --------->LBD16   --------->ARR14(2)                              --------->MYB52(1) --------->LBD16                 --------->AHL20(2)                             <---------ALFIN1--------->MYB52(1)              --------->AHL20(2)                        ----------->GT1   --------->At4g35610                <---------AHL20(2) ----------->RAV1(1)   <---------TOE2(3)  <---------At4g35610                <---------YAB1 ------>ANAC46         <---------TOE1(3) <-----------ARR10               ----------->TBP --->TEIL         <------------CBF --------->ARR14(2)            --------->TOE1(3) -------GT1    ------------>CBF<---------LBD16-------->P         --------->TOE2(3)<-----------GT1  --   accccacaaaaaaaaaaaacaattgaaggtaacaccggaaccgtagctaaccggaaaccgaagaaaaccctaactatatataattaactcatcatcttct  16174800                                            <---------ANAC58                                           <---------At4g35610                                           --------->At4g35610                                         <---------CCA1(2) --------->ARR11(3)                                     <---------ANAC58      <---------ARR14(2)                                     <---------ANAC58      <---------ARR11(3)                               --------->AtMYB61           --------->ARR14(2)                              --------->MYB46(3)           <-----------ARR10                             --------->ANAC58             <---------CCA1(2)                           --------->MYB46(3)          ------>ZmHOX2a(1)                 <----------DOF2 ---------->DOF2  <---------At4g35610    *TSS      <-----------GT1--------->ANAC58    ------>ZmHOX2a(1) ------->TOE2(3) <---------DAG2------->GAMYB<---------ANAC58                                  <------   tccttcattttcgttttcactttctccgaacaaccaaaagcttgtagcttcctgctcctcaaatcttcttggtaactcttcttccaatgtctctcaatcg  16174900                                                                                            ---------                                                                                   <----------DOF2                                                                              --------->At4g35610                                                                              ------>NtERF2------>ZmHOX2a(1)          --------->AHL20(2)                                          <---------TOE1(3)   <---------ALFIN1      <---------ANAC46                    <---------AtMYB61 ----------->GT1   <---------At4g35610   <---------MYB52(1)                <------MYB46(1)   ---------->DOF2<---------TOE2(3) ------>ZmHOX2a(1) ---ATHB12<---------AHL20(2)         <------MYB83     <---------AHL20(2)    <---------RAP2.6(2)  <---   attcccttgtgtttaattctatttctgagtaatttgatttggttttggttttgtattaaaagcagaaaaatgaaggttgccgctgctttcctcctcgccg  16175000                                                     ----------->GT1                                                  <---------ZAT2                                                  --------->ZAT2                                                  --------->At4g35610                                         --------->ARR11(3)                                        --------->GLK1(1)          --------->ANAC58              <---------GLK1(1)       <---------ARR14(2)              <---------ARR11(3)       --------->ARR14(2)          ---------->DOF2<---------At4g35610      <------NtERF2    <---------At4g35610   --------->At4g35610                                    -   <---------LBD16     --------->At4g35610<---------YAB1                                      <------ >ANAC46  --------->ANAC58       <---------YAB1  <---------ARR14(2)                   ------->TEIL <- ------MYB52(1)    ------>ZmHOX2a(1)   --------->ARR11(3)           <----------DOF2<---------YAB1  --   ttttgggcggaaacgctaatccttctgctgataatatcaaagatatcatcggagctggtaaatttctgtgcttttgaatttgtttatgaatgtgttttga  16175100                                                                   <----------DOF2                                                                  <---------ANAC58                                                      <---------GLK1(2)                                                      --------->ARR11(3)                                                     <---------HSFB2a(1)                                                     <---------HSFC1(2)                                                     --------->HSFC1(2)                                                    ----------->ARR10                                                    <---------KAN4(2)                                           --------->ATHB12       <---------ANAC58                                          --------->ICU4     <---------ARR14(2)              <---------At5g28300         <---------YAB1     --------->ARR14(2)                   <-- -------->ATHB12                        <---------ICU4--------->ARR14(2)                         <--- ---YAB1  <---------ZAT6               --------->ICU4--------->HSFB2a(1)                        >>>>> --------AHL20(2)     ------>ZmHOX2a(2)<---------ATHB12--------->GLK1(2)                      <------ ------->AHL20(2)     <---------DEAR3(1)--------->YAB1<---------ARR14(2)         --------->YAB1------   ttttattggattgtgttactgtgatcggcgaagtagtagcaatgatgatttgggaagattctgtatttgctttgttttagctataagagttttagtttga  16175200 -------MYB46(3)                --------->ZAT14        <------ZmHOX2a(1)                 <---------At4g35610 ------WOX13(1)                 --------->ZAT18    ---------->DOF2                    <------MYB83 >>>>ARR2             --------->ARR11(3)      <-------TEIL      <---------MYB46(3)    <------MYB46(1) ---YAB1              <---------ARR11(3)  <---------YAB1  <----------DOF2            <---------MYB46(3) --->ATHB12--------->YAB1       <---------ZAT14 --------->TOE2(3)    <---------YAB1  --------->MYB111(1)   ttgttgaagagtataagaacagaagatagttttgttcactgtatatgattcattaaaggactttgtttgttatgttttgttatgtagttggtgctgatgt  16175300  Previous    Next  AGI:  At3g44590.1    Description:  60S acidic ribosomal protein P2 (RPP2D). Identical to 60S acidic ribosomal protein P2-4 (RPP2D) [Arabidopsis Thaliana] (GB:Q9LXM8); similar to 60S acidic ribosomal protein P2 (RPP2A) [Arabidopsis thaliana] (TAIR:AT2G27720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15939.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73396.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) Range:  from: 16174804    to: 16175918    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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