Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->YAB1          ----------->GT1                     --------->MYB52(1)         --------->HSFB2a(2)                 --------->AHL20(2)   --------->AHL20(2)                        <---------AHL20(2)   <---------AHL20(2)                    --------->AHL20(2) -->TEIL <---------HSFB2a(2)             <---------AHL20(2)                                     ----- -----LBD16       --------->AHL20(2)    --------->AHL20(2)                          <---------AHL20(2) -------AtSPL8   --------->YAB1  <---------YAB1                                  <---------GLK1(2) <- -------AtSPL3  --------->AHL20(2)  ------->TEIL                           <----------DOF2     <-----   cggatttaaatctagaaaataaaaataatctcgttatgaacatttaattaactgataaacattctcagtgttttcttctttcagattttattcagttttt  16148600                                                                                               ------                                                                                               <-----                                                                                               ------                   --------->TOE2(3)                                                           <-----                   --------->TOE1(3)                                                          -------       <----------DOF2                                                                        -------       --------->TOE2(3)                                                                  --------->AHL20(2)  --------->YAB1<-----------GT1                                                    <---------ZAT14 ---->YAB1--------->AHL20(2)                                                       <---------ZAT18 ----------GT1--------->AHL20(2)          ---------->DOF2                          --------->ZAT14 ----YAB1--------->AHL20(2)    <---------------------WRI1<----------DOF2           --------->ZAT18   ataaccatactttaaattaaaccttacaaagagtttgatacaaacaaagccaaaactagctttgcaaaaaaaccaagtttttcaatgcactaaaaaatat  16148700                        ---------->DOF2                    ---------->DOF2 --->ARR11(3)  <---------GLK1(1)              <---------REM1(1) ----ARR11(3)  --------->ZAT2--------->ARR11(3)        <------ZmHOX2a(1)       <---------AHL20(2) --->ARR14(2)  --------->GLK1(1)             <---------TOE2(3)                --------->AHL20(2) ----ARR14(2)  <---------ZAT2<---------ARR11(3)     <---------LBD16     <---------ZAT18 -->CCA1(1)    <---------At4g35610        <---------WOX13(1)           <-----------GT1 -->RVE1(1)    --------->At4g35610      --------->ATHB12 <------ZmHOX2a(2)  <----------DOF2   -------   ctgccaaaacaccatggagctccgataaaagggtcttcgacttgattgatgtaaccaggatcaaagttgttttttgcactttaaattgtttgaaactagt  16148800                                                              <---------YAB1                                                   --------->AHL20(2)                        --------                                                   <---------AHL20(2)                        <-------                                                   <---------ARR11(3)                        <-------                                                   --------->AHL20(1)            <<<<<<<<<<<<<<<<<LFY                                        <-----------GT1 --------->AHL20(2)       <------ZmHOX2a(1)                                     --------->ARR14(2) <---------AHL20(2)    <---------At4g35610           ---------->DOF2           <---------ARR14(2)--------->AHL20(2)     --------->At4g35610     --------->AHL20(2)      <---------ICU4        --------->ARR11(3)       <-----------RAV1(2)     <---------AHL20(2)     <---------ATHB51       <---------AHL20(1)       <---------WRKY12 -------- ---->GT1 --------->AHL20(2)<---------AHL20(2)--------------->AGL15       <-----------HVH21----------   aactaatataaataaaagacttctcgctaaattatggcaaattttcttcttaatatattaaattctgatcatataaggtcagaggacattggacagatat  16148900                                   <-------TEIL               <---------At4g35610             -------       <---------AHL20(2)          ------------>CBF           --------->At4g35610          ---------- ->ARR14(2)                      --------->ZAT18              <---------ZAT2         ------------>CBF --ARR14(2)           <------------CBF                       --------->MYB52(2)     <---------------AGL15 --ARR11(3)          --------->ATHB12       <----------DOF2------>ZmHOX2a(1)        <<<<<<<<<<<<<<<<<LFY ->ARR11(3)   <<<<<<<<<MYB98 <------ZmHOX2a(1) <---------ANAC58                  --------->ZAT6    <- ->ARR10      <---------MYB52(1)----------->GT1<---------ANAC58      ----------->TBP--------------->AGL15   tggttttgtttattttgttaggcttattggaggagggtacaatagactttcttgcaacgtccttagctgctataaatactcttatactacaatgggtata  16149000                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                              -------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                        <-----------HVH21    *TSS                                                                             <---------ANAC58 ---->ARR10<-----------GT1                                                           <---------ANAC58 ->GT1  --------->YAB1         ---------->DOF2                                    <---------GLK1(2) - ----------GT1       --------->LBD16                             <---------ARR11(3)--------->GLK1(2)-   tttgcctcattaataacttcttccgaattagaccaaagtccagacaatggaactcaattgtgttcaatttcttcgaaacaagacgattcttgtcaccgga  16149100 ----->ZAT2 ------At4g35610                                            <---------ARR14(2) ----->At4g35610                                            --------->ARR14(2) ------ZAT2                                         <---------ICU4 -->LBD16<---------ANAC58                           -------->HAHB4 -At4g35610                                         <---------AHL20(2)                              - -LBD16  <---------ANAC58                          <---------ATHB51                           <------ >At4g35610                                        <---------YAB1        <---------ZAT6  --------->MYB52(2) -------->MYB52(1)                  <---------At4g35610     <---------ARR11(3)         <---------MYB52(1) ------->P                  <---------AHL20(2)     --------->ICU4<---------YAB1       --------->TOE2(3)   gctaccggtttccttgcgaagggtatgtcttaaatttctgctaatttttgttaattattcaagatttgttatagagtgttaatgacttcgttagtgcttt  16149200                                                                         <----------DOF2                                                                   --------->ARR11(3)                                                            <----------DOF2                                --------->TOE2(2)     --------->ATHB12   <---------DAG2               <---------AHL20(2)                    <---------YAB1<---------ARR11(3)               --------->AHL20(2)         --------->TOE2(3)<---------ANAC58  <---------ALFIN1 --------->YAB1    --------->ARR11(3)    <---------ANAC58              --------->MYB46(3) ---------->RAV1(1)<---------ICU4    <---------ARR11(3) <---------WOX13(1)     --------->AHL20(2) ----DOF2     --------->AHL20(2)--------->TOE1(2)  --------->YAB1 <---------GLK1(1)   <----------ID1<   ggcaacacagtttcaaattaatagtgacatataacataagatttcgtcaaaaatcgtgattgcttttgatatctcctttttttatataacaacaaatgtt  16149300                                                                                            <--------                                                                                       <--------HAHB4                                                                                       -------->HAHB4                                                                                       <--------ATHB1                                                                                       --------->YAB1                                                                                       <---------ICU4                                                                                      --------->ICU4                 --------->ATHB12                                                     <---------YAB1             --------->AHL20(1)                                                       --------->AHL20(2)             <---------AHL20(1)                                 <---------ANAC55(2)   <---------ATHB51            <---------CCA1(2)                                   --------->ANAC55(2) --------->YAB1     --------->ARR11(3)                                      --------->ARR14(2)  --------->YAB1     --------->ARR14(2)                                      <---------ARR14(2)<---------ARR11(3)     <---------ARR14(2)                                    <---------KAN4(2) --------->ANAC58     ---     <---------ARR11(3)                    ----------->GT1 ---------->TaMYB80--------->ANAC46  <----- --------->YAB1 <---------AHL20(2)    ---------->DOF2  >>>>>>>>>TBF1 --------->AHL20(2)--------->ATHB51 ---------ATHB12<---------YAB1 --------->AtLEC2 ---------->DOF2<-------TEIL  --------->ANAC58 -------   caatgaagatacttatatattattgattttttcatacaaaaaaagaagaaaaaagaagaagaatatacgtataaaatacacgatattaataattaagatg  16149400                                                       <---------YAB1                                                     --------->YAB1                                                    <---------YAB1                                                    <---------AHL20(2)                                                 <---------AHL20(1)                                               --------->AHL20(1)            --------->ATHB12                                               <---------AHL20(1)           <---------YAB1                                            --------->AHL20(2)       --------->AHL20(2) -TOE2(3)         --------->ICU4         --------->TOE2(3)      <---------MYB59 -------->GT1     <---------YAB1        ------>ZmHOX2a(2)    <------ZmHOX2a(1)   --------->YAB1 ----REM1(1) --------->ANAC46<---------At4g35610 --------->AHL20(1)  <---------AHL20(2) -->ARR11(3) --------->ANAC55(2)        ============================HOX2a_HOX2a<---------WOX13(1)   tagtttataacttataagtaatgactgttttagctcgtgtgatccataatatatattataagaggacctatttatattttcattgatatttcttagtttt  16149500  Previous    Next  AGI:  At3g44550.1    Description:  oxidoreductase, acting on the CH-CH group of donors. similar to acyl CoA reductase, putative / male-sterility protein, putative [Arabidopsis thaliana] (TAIR:AT5G22500.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44540.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22305.1); contains InterPro domain Male sterility (InterPro:IPR004262); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Male sterility, NAD-binding (InterPro:IPR013120) Range:  from: 16149004    to: 16152533    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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